Gene: CC00G186920 (Cyclotella cryptica)

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Gene Identifier
CC00G186920
Transcript Identifier
CC00G186920.1
Gene Type
Coding gene
Location
g014235_00173 : 9019-12272 : negative

Family Information

Homologous gene family
HOM02SEM005093
(16 genes in 14 species)
specific family

Descriptions

eggnog_description
nucleotide-excision repair

Identifiers

Type Value
GeneNameg14042.t1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IEA
EggNOGmappernucleotide-excision repair
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0010564
IEA
PLAZA Integrative Orthologyregulation of cell cycle process ENSG00000154767
GO:0071103
IEA
PLAZA Integrative OrthologyDNA conformation change ENSG00000154767
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process ENSG00000154767
GO:0000003
IEA
PLAZA Integrative Orthologyreproduction FBgn0004698
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle ENSG00000154767
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization ENSG00000154767
GO:0022414
IEA
PLAZA Integrative Orthologyreproductive process FBgn0004698
GO:0071478
IEA
PLAZA Integrative Orthologycellular response to radiation ENSG00000154767
GO:0034644
IEA
PLAZA Integrative Orthologycellular response to UV ENSG00000154767
GO:0032508
IEA
PLAZA Integrative OrthologyDNA duplex unwinding ENSG00000154767
GO:0044772
IEA
PLAZA Integrative Orthologymitotic cell cycle phase transition ENSG00000154767
GO:0070911
IEA
PLAZA Integrative Orthologyglobal genome nucleotide-excision repair ENSG00000154767
GO:0104004
IEA
PLAZA Integrative Orthologycellular response to environmental stimulus ENSG00000154767
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis ENSG00000154767
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization ENSG00000154767
GO:0044770
IEA
PLAZA Integrative Orthologycell cycle phase transition ENSG00000154767
GO:0007346
IEA
PLAZA Integrative Orthologyregulation of mitotic cell cycle ENSG00000154767
GO:0070914
IEA
PLAZA Integrative OrthologyUV-damage excision repair ENSG00000154767
GO:0071214
IEA
PLAZA Integrative Orthologycellular response to abiotic stimulus ENSG00000154767
GO:0051726
IEA
PLAZA Integrative Orthologyregulation of cell cycle ENSG00000154767
GO:0051321
IEA
PLAZA Integrative Orthologymeiotic cell cycle FBgn0004698
GO:0048285
IEA
PLAZA Integrative Orthologyorganelle fission FBgn0004698
GO:0044085
IEA
PLAZA Integrative Orthologycellular component biogenesis ENSG00000154767
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus ENSG00000154767
GO:1903046
IEA
PLAZA Integrative Orthologymeiotic cell cycle process FBgn0004698
GO:1903047
IEA
PLAZA Integrative Orthologymitotic cell cycle process ENSG00000154767
GO:0022607
IEA
PLAZA Integrative Orthologycellular component assembly ENSG00000154767
GO:0071824
IEA
PLAZA Integrative Orthologyprotein-DNA complex subunit organization ENSG00000154767
GO:0051276
IEA
PLAZA Integrative Orthologychromosome organization ENSG00000154767
GO:0007127
IEA
PLAZA Integrative Orthologymeiosis I FBgn0004698
GO:0061982
IEA
PLAZA Integrative Orthologymeiosis I cell cycle process FBgn0004698
GO:0006310
IEA
PLAZA Integrative OrthologyDNA recombination FBgn0004698
GO:0140013
IEA
PLAZA Integrative Orthologymeiotic nuclear division FBgn0004698
GO:0043933
IEA
PLAZA Integrative Orthologyprotein-containing complex subunit organization ENSG00000154767
GO:0000280
IEA
PLAZA Integrative Orthologynuclear division FBgn0004698
GO:0000278
IEA
PLAZA Integrative Orthologymitotic cell cycle ENSG00000154767
GO:0009416
IEA
PLAZA Integrative Orthologyresponse to light stimulus ENSG00000154767
GO:0000710
IEA
PLAZA Integrative Orthologymeiotic mismatch repair FBgn0004698
GO:0009411
IEA
PLAZA Integrative Orthologyresponse to UV ENSG00000154767
GO:0000715
IEA
EggNOGmappernucleotide-excision repair, DNA damage recognition
GO:0000717
IEA
PLAZA Integrative Orthologynucleotide-excision repair, DNA duplex unwinding ENSG00000154767
GO:0032392
IEA
PLAZA Integrative OrthologyDNA geometric change ENSG00000154767
GO:0035825
IEA
PLAZA Integrative Orthologyhomologous recombination FBgn0004698
GO:0071482
IEA
PLAZA Integrative Orthologycellular response to light stimulus ENSG00000154767
GO:0006298
IEA
EggNOGmappermismatch repair
GO:0006294
IEA
PLAZA Integrative Orthologynucleotide-excision repair, preincision complex assembly ENSG00000154767
GO:0065004
IEA
PLAZA Integrative Orthologyprotein-DNA complex assembly ENSG00000154767
GO:0065003
IEA
PLAZA Integrative Orthologyprotein-containing complex assembly ENSG00000154767
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation ENSG00000154767
GO:1901990
IEA
PLAZA Integrative Orthologyregulation of mitotic cell cycle phase transition ENSG00000154767
GO:0034622
IEA
PLAZA Integrative Orthologycellular protein-containing complex assembly ENSG00000154767
GO:0010777
IEA
PLAZA Integrative Orthologymeiotic mismatch repair involved in reciprocal meiotic recombination FBgn0004698
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process ENSG00000154767
GO:1901987
IEA
PLAZA Integrative Orthologyregulation of cell cycle phase transition ENSG00000154767
GO:0009314
IEA
PLAZA Integrative Orthologyresponse to radiation ENSG00000154767
GO:0007131
IEA
PLAZA Integrative Orthologyreciprocal meiotic recombination FBgn0004698
GO:0022402
IEA
PLAZA Integrative Orthologycell cycle process ENSG00000154767
GO:0048856
IEA
EggNOGmapperanatomical structure development
GO:0042493
IEA
EggNOGmapperresponse to drug
GO:1901988
IEA
EggNOGmappernegative regulation of cell cycle phase transition
GO:0007275
IEA
EggNOGmappermulticellular organism development
GO:0043161
IEA
EggNOGmapperproteasome-mediated ubiquitin-dependent protein catabolic process
GO:0006511
IEA
EggNOGmapperubiquitin-dependent protein catabolic process
GO:0031573
IEA
EggNOGmapperintra-S DNA damage checkpoint
GO:0010224
IEA
EggNOGmapperresponse to UV-B
GO:0006308
IEA
EggNOGmapperDNA catabolic process
GO:0000718
IEA
EggNOGmappernucleotide-excision repair, DNA damage removal

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003684
IEA
EggNOGmapperdamaged DNA binding
GO:0003684
IEA
InterProdamaged DNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000404
IEA
EggNOGmapperheteroduplex DNA loop binding
GO:0000405
IEA
EggNOGmapperbubble DNA binding
GO:0030983
IEA
PLAZA Integrative Orthologymismatched DNA binding ENSG00000154767
GO:0044877
IEA
PLAZA Integrative Orthologyprotein-containing complex binding ENSG00000154767
GO:0032135
IEA
EggNOGmapperDNA insertion or deletion binding
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding ENSG00000154767
GO:0003697
IEA
EggNOGmappersingle-stranded DNA binding
GO:0000217
IEA
PLAZA Integrative OrthologyDNA secondary structure binding ENSG00000154767
GO:0003690
IEA
PLAZA Integrative Orthologydouble-stranded DNA binding ENSG00000154767

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005819
IEA
EggNOGmapperspindle
GO:0016020
IEA
EggNOGmappermembrane
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen SPCC4G3.10c
GO:0044430
IEA
PLAZA Integrative Orthologycytoskeletal part SPAC12B10.12c
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part SPAC12B10.12c
GO:0044421
IEA
PLAZA Integrative Orthologyextracellular region part ENSG00000154767
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part SPCC4G3.10c
GO:0072686
IEA
PLAZA Integrative Orthologymitotic spindle SPAC12B10.12c
GO:0005654
IEA
EggNOGmappernucleoplasm
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex ENSG00000154767
GO:0009507
IEA
EggNOGmapperchloroplast
GO:1903561
IEA
PLAZA Integrative Orthologyextracellular vesicle ENSG00000154767
GO:0015630
IEA
EggNOGmappermicrotubule cytoskeleton
GO:0071944
IEA
PLAZA Integrative Orthologycell periphery ENSG00000154767
GO:0071942
IEA
EggNOGmapperXPC complex
GO:0005739
IEA
PLAZA Integrative Orthologymitochondrion ENSG00000154767
GO:0005856
IEA
PLAZA Integrative Orthologycytoskeleton SPAC12B10.12c
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm AT5G16630
GO:0005615
IEA
PLAZA Integrative Orthologyextracellular space ENSG00000154767
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen SPCC4G3.10c
GO:0070062
IEA
PLAZA Integrative Orthologyextracellular exosome ENSG00000154767
GO:0009536
IEA
PLAZA Integrative Orthologyplastid AT5G16630
GO:0005576
IEA
PLAZA Integrative Orthologyextracellular region ENSG00000154767
GO:0005730
IEA
EggNOGmappernucleolus
GO:1990391
IEA
PLAZA Integrative OrthologyDNA repair complex ENSG00000154767
GO:0031982
IEA
PLAZA Integrative Orthologyvesicle ENSG00000154767
GO:0031981
IEA
EggNOGmappernuclear lumen
GO:0005886
IEA
PLAZA Integrative Orthologyplasma membrane ENSG00000154767
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part SPAC12B10.12c
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part AT5G16630
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle SPAC12B10.12c
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen SPCC4G3.10c
GO:0000109
IEA
PLAZA Integrative Orthologynucleotide-excision repair complex ENSG00000154767
GO:0043230
IEA
PLAZA Integrative Orthologyextracellular organelle ENSG00000154767
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle SPAC12B10.12c
GO:0000111
IEA
EggNOGmappernucleotide-excision repair factor 2 complex
GO:0005829
IEA
EggNOGmappercytosol

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR004583DNA repair protein Rad4
IPR018326Rad4 beta-hairpin domain 1
IPR018327Rad4 beta-hairpin domain 2
IPR018328Rad4 beta-hairpin domain 3

No MapMan annotations defined for this gene.
KeggID Description
K10838XPC; xeroderma pigmentosum group C-complementing protein
No chloroplast target sequence found.