Gene: CC00G182480 (Cyclotella cryptica)

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Gene Identifier
CC00G182480
Transcript Identifier
CC00G182480.1
Gene Type
Coding gene
Location
g015863_00112 : 10956-13303 : positive

Family Information

Homologous gene family
HOM02SEM002788
(26 genes in 16 species)
specific family
Orthologous gene family
ORTHO02SEM003174
(25 genes in 16 species)
specific family

Descriptions

eggnog_description
5-methyltetrahydropteroyltriglutamate--homocysteine

Identifiers

Type Value
GeneNameg12993.t1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008652
IEA
InterProcellular amino acid biosynthetic process
GO:0009086
IEA
InterPromethionine biosynthetic process
GO:0071265
IEA
PLAZA Integrative OrthologyL-methionine biosynthetic process SPAC9.09
GO:0071266
IEA
PLAZA Integrative Orthology'de novo' L-methionine biosynthetic process SPAC9.09
GO:0044271
IEA
PLAZA Integrative Orthologycellular nitrogen compound biosynthetic process SPAC9.09
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress AT5G17920
GO:0009069
IEA
PLAZA Integrative Orthologyserine family amino acid metabolic process SPAC9.09
GO:0046686
IEA
PLAZA Integrative Orthologyresponse to cadmium ion AT5G17920
GO:0042440
IEA
PLAZA Integrative Orthologypigment metabolic process SPAC9.09
GO:0055086
IEA
PLAZA Integrative Orthologynucleobase-containing small molecule metabolic process SPAC9.09
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus AT5G17920
GO:0046083
IEA
PLAZA Integrative Orthologyadenine metabolic process SPAC9.09
GO:0009092
IEA
PLAZA Integrative Orthologyhomoserine metabolic process SPAC9.09
GO:0010035
IEA
PLAZA Integrative Orthologyresponse to inorganic substance AT5G17920
GO:0072522
IEA
PLAZA Integrative Orthologypurine-containing compound biosynthetic process SPAC9.09
GO:0034641
IEA
PLAZA Integrative Orthologycellular nitrogen compound metabolic process SPAC9.09
GO:0010038
IEA
PLAZA Integrative Orthologyresponse to metal ion AT5G17920
GO:0072521
IEA
PLAZA Integrative Orthologypurine-containing compound metabolic process SPAC9.09
GO:0018130
IEA
PLAZA Integrative Orthologyheterocycle biosynthetic process SPAC9.09
GO:0046084
IEA
PLAZA Integrative Orthologyadenine biosynthetic process SPAC9.09
GO:0046483
IEA
PLAZA Integrative Orthologyheterocycle metabolic process SPAC9.09
GO:0006144
IEA
PLAZA Integrative Orthologypurine nucleobase metabolic process SPAC9.09
GO:1901362
IEA
PLAZA Integrative Orthologyorganic cyclic compound biosynthetic process SPAC9.09
GO:0009651
IEA
PLAZA Integrative Orthologyresponse to salt stress AT5G17920
GO:0010043
IEA
PLAZA Integrative Orthologyresponse to zinc ion AT5G17920
GO:1901360
IEA
PLAZA Integrative Orthologyorganic cyclic compound metabolic process SPAC9.09
GO:0019438
IEA
PLAZA Integrative Orthologyaromatic compound biosynthetic process SPAC9.09
GO:0019279
IEA
PLAZA Integrative OrthologyL-methionine biosynthetic process from L-homoserine via cystathionine SPAC9.09
GO:0046112
IEA
PLAZA Integrative Orthologynucleobase biosynthetic process SPAC9.09
GO:0006725
IEA
PLAZA Integrative Orthologycellular aromatic compound metabolic process SPAC9.09
GO:0006139
IEA
PLAZA Integrative Orthologynucleobase-containing compound metabolic process SPAC9.09
GO:0046148
IEA
PLAZA Integrative Orthologypigment biosynthetic process SPAC9.09
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical AT5G17920
GO:0006970
IEA
PLAZA Integrative Orthologyresponse to osmotic stress AT5G17920
GO:0017144
IEA
PLAZA Integrative Orthologydrug metabolic process SPAC9.09
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus AT5G17920
GO:0019280
IEA
PLAZA Integrative OrthologyL-methionine biosynthetic process from homoserine via O-acetyl-L-homoserine and cystathionine SPAC9.09
GO:0009113
IEA
PLAZA Integrative Orthologypurine nucleobase biosynthetic process SPAC9.09
GO:0009112
IEA
PLAZA Integrative Orthologynucleobase metabolic process SPAC9.09

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003871
IEA
InterPro5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
GO:0008270
IEA
InterProzinc ion binding
GO:0042084
IEA
PLAZA Integrative Orthology5-methyltetrahydrofolate-dependent methyltransferase activity AT5G20980
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT5G17920
GO:0008705
IEA
PLAZA Integrative Orthologymethionine synthase activity AT5G20980
GO:0005507
IEA
PLAZA Integrative Orthologycopper ion binding AT5G17920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071944
IEA
PLAZA Integrative Orthologycell periphery AT5G17920
GO:0098805
IEA
PLAZA Integrative Orthologywhole membrane AT5G17920
GO:0016020
IEA
PLAZA Integrative Orthologymembrane AT5G17920
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm SPAC9.09
GO:0005777
IEA
PLAZA Integrative Orthologyperoxisome AT5G17920
GO:0031967
IEA
PLAZA Integrative Orthologyorganelle envelope AT3G03780
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular SPAC9.09
GO:0031090
IEA
PLAZA Integrative Orthologyorganelle membrane AT5G17920
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part SPAC9.09
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part AT5G17920
GO:0044464
IEA
PLAZA Integrative Orthologycell part SPAC9.09
GO:0009941
IEA
PLAZA Integrative Orthologychloroplast envelope AT3G03780
GO:0055044
IEA
PLAZA Integrative Orthologysymplast AT5G17920
GO:0031975
IEA
PLAZA Integrative Orthologyenvelope AT3G03780
GO:0009536
IEA
PLAZA Integrative Orthologyplastid AT5G20980
GO:0005773
IEA
PLAZA Integrative Orthologyvacuole AT5G17920
GO:0005576
IEA
PLAZA Integrative Orthologyextracellular region AT5G17920
GO:0005774
IEA
PLAZA Integrative Orthologyvacuolar membrane AT5G17920
GO:0009532
IEA
PLAZA Integrative Orthologyplastid stroma AT5G17920
GO:0009570
IEA
PLAZA Integrative Orthologychloroplast stroma AT5G17920
GO:0030054
IEA
PLAZA Integrative Orthologycell junction AT5G17920
GO:0098588
IEA
PLAZA Integrative Orthologybounding membrane of organelle AT5G17920
GO:0005911
IEA
PLAZA Integrative Orthologycell-cell junction AT5G17920
GO:0005634
IEA
PLAZA Integrative Orthologynucleus SPAC9.09
GO:0005886
IEA
PLAZA Integrative Orthologyplasma membrane AT5G17920
GO:0009526
IEA
PLAZA Integrative Orthologyplastid envelope AT3G03780
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part AT5G17920
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPAC9.09
GO:0005829
IEA
PLAZA Integrative Orthologycytosol SPAC9.09
GO:0048046
IEA
PLAZA Integrative Orthologyapoplast AT5G17920
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle SPAC9.09
GO:0009506
IEA
PLAZA Integrative Orthologyplasmodesma AT5G17920
GO:0009507
IEA
PLAZA Integrative Orthologychloroplast AT5G20980
GO:0005623
IEA
PLAZA Integrative Orthologycell SPAC9.09
GO:0042579
IEA
PLAZA Integrative Orthologymicrobody AT5G17920
GO:0044437
IEA
PLAZA Integrative Orthologyvacuolar part AT5G17920
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle SPAC9.09
GO:0044435
IEA
PLAZA Integrative Orthologyplastid part AT5G17920
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPAC9.09
GO:0044434
IEA
PLAZA Integrative Orthologychloroplast part AT5G17920
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPAC9.09

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR013215Cobalamin-independent methionine synthase MetE, N-terminal
IPR002629Cobalamin-independent methionine synthase MetE, C-terminal/archaeal
IPR006276Cobalamin-independent methionine synthase

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.