Gene: CC00G168320 (Cyclotella cryptica)

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Gene Identifier
CC00G168320
Transcript Identifier
CC00G168320.1
Gene Type
Coding gene
Location
g003505_00057 : 287-1633 : negative

Family Information

Homologous gene family
HOM02SEM008649
(10 genes in 9 species)
specific family

Descriptions

eggnog_description
Nei endonuclease VIII-like 3 (E. coli)

Identifiers

Type Value
GeneNameg24449.t1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0006284
IEA
EggNOGmapperbase-excision repair
GO:0006284
IEA
InterProbase-excision repair
GO:0009394
IEA
PLAZA Integrative Orthology2'-deoxyribonucleotide metabolic process ENSG00000154328
GO:0019637
IEA
PLAZA Integrative Orthologyorganophosphate metabolic process ENSG00000154328
GO:0019439
IEA
PLAZA Integrative Orthologyaromatic compound catabolic process ENSG00000154328
GO:0006285
IEA
PLAZA Integrative Orthologybase-excision repair, AP site formation ENSG00000154328
GO:0006244
IEA
PLAZA Integrative Orthologypyrimidine nucleotide catabolic process ENSG00000154328
GO:0045008
IEA
PLAZA Integrative Orthologydepyrimidination ENSG00000154328
GO:0009117
IEA
PLAZA Integrative Orthologynucleotide metabolic process ENSG00000154328
GO:0044281
IEA
PLAZA Integrative Orthologysmall molecule metabolic process ENSG00000154328
GO:0044283
IEA
PLAZA Integrative Orthologysmall molecule biosynthetic process ENSG00000154328
GO:0046386
IEA
PLAZA Integrative Orthologydeoxyribose phosphate catabolic process ENSG00000154328
GO:0009166
IEA
PLAZA Integrative Orthologynucleotide catabolic process ENSG00000154328
GO:0046700
IEA
PLAZA Integrative Orthologyheterocycle catabolic process ENSG00000154328
GO:0044249
IEA
PLAZA Integrative Orthologycellular biosynthetic process ENSG00000154328
GO:0044248
IEA
PLAZA Integrative Orthologycellular catabolic process ENSG00000154328
GO:0034655
IEA
PLAZA Integrative Orthologynucleobase-containing compound catabolic process ENSG00000154328
GO:0034654
IEA
PLAZA Integrative Orthologynucleobase-containing compound biosynthetic process ENSG00000154328
GO:0019438
IEA
PLAZA Integrative Orthologyaromatic compound biosynthetic process ENSG00000154328
GO:1901361
IEA
PLAZA Integrative Orthologyorganic cyclic compound catabolic process ENSG00000154328
GO:1901362
IEA
PLAZA Integrative Orthologyorganic cyclic compound biosynthetic process ENSG00000154328
GO:0009056
IEA
PLAZA Integrative Orthologycatabolic process ENSG00000154328
GO:1901565
IEA
PLAZA Integrative Orthologyorganonitrogen compound catabolic process ENSG00000154328
GO:1901564
IEA
PLAZA Integrative Orthologyorganonitrogen compound metabolic process ENSG00000154328
GO:0006220
IEA
PLAZA Integrative Orthologypyrimidine nucleotide metabolic process ENSG00000154328
GO:0009058
IEA
PLAZA Integrative Orthologybiosynthetic process ENSG00000154328
GO:0046434
IEA
PLAZA Integrative Orthologyorganophosphate catabolic process ENSG00000154328
GO:0009219
IEA
PLAZA Integrative Orthologypyrimidine deoxyribonucleotide metabolic process ENSG00000154328
GO:0006304
IEA
PLAZA Integrative OrthologyDNA modification ENSG00000154328
GO:0018130
IEA
PLAZA Integrative Orthologyheterocycle biosynthetic process ENSG00000154328
GO:0072529
IEA
PLAZA Integrative Orthologypyrimidine-containing compound catabolic process ENSG00000154328
GO:0072527
IEA
PLAZA Integrative Orthologypyrimidine-containing compound metabolic process ENSG00000154328
GO:0034404
IEA
PLAZA Integrative Orthologynucleobase-containing small molecule biosynthetic process ENSG00000154328
GO:0009262
IEA
PLAZA Integrative Orthologydeoxyribonucleotide metabolic process ENSG00000154328
GO:1901292
IEA
PLAZA Integrative Orthologynucleoside phosphate catabolic process ENSG00000154328
GO:0055086
IEA
PLAZA Integrative Orthologynucleobase-containing small molecule metabolic process ENSG00000154328
GO:0009264
IEA
PLAZA Integrative Orthologydeoxyribonucleotide catabolic process ENSG00000154328
GO:1901136
IEA
PLAZA Integrative Orthologycarbohydrate derivative catabolic process ENSG00000154328
GO:1901576
IEA
PLAZA Integrative Orthologyorganic substance biosynthetic process ENSG00000154328
GO:1901135
IEA
PLAZA Integrative Orthologycarbohydrate derivative metabolic process ENSG00000154328
GO:1901575
IEA
PLAZA Integrative Orthologyorganic substance catabolic process ENSG00000154328
GO:0006793
IEA
PLAZA Integrative Orthologyphosphorus metabolic process ENSG00000154328
GO:0009223
IEA
PLAZA Integrative Orthologypyrimidine deoxyribonucleotide catabolic process ENSG00000154328
GO:0043412
IEA
PLAZA Integrative Orthologymacromolecule modification ENSG00000154328
GO:0006796
IEA
PLAZA Integrative Orthologyphosphate-containing compound metabolic process ENSG00000154328
GO:0006753
IEA
PLAZA Integrative Orthologynucleoside phosphate metabolic process ENSG00000154328
GO:0044270
IEA
PLAZA Integrative Orthologycellular nitrogen compound catabolic process ENSG00000154328
GO:0044271
IEA
PLAZA Integrative Orthologycellular nitrogen compound biosynthetic process ENSG00000154328
GO:0019692
IEA
PLAZA Integrative Orthologydeoxyribose phosphate metabolic process ENSG00000154328

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
InterProzinc ion binding
GO:0003684
IEA
InterProdamaged DNA binding
GO:0003906
IEA
EggNOGmapperDNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0003906
IEA
InterProDNA-(apurinic or apyrimidinic site) endonuclease activity
GO:0016799
IEA
EggNOGmapperhydrolase activity, hydrolyzing N-glycosyl compounds
GO:0016799
IEA
InterProhydrolase activity, hydrolyzing N-glycosyl compounds
GO:0003676
IEA
InterPronucleic acid binding
GO:0003697
IEA
EggNOGmappersingle-stranded DNA binding
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding ENSG00000154328
GO:0019104
IEA
EggNOGmapperDNA N-glycosylase activity
GO:0003690
IEA
EggNOGmapperdouble-stranded DNA binding
GO:0016835
IEA
EggNOGmappercarbon-oxygen lyase activity
GO:0000405
IEA
EggNOGmapperbubble DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle ENSG00000154328
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle ENSG00000154328
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle ENSG00000154328
GO:0043227
IEA
PLAZA Integrative Orthologymembrane-bounded organelle ENSG00000154328
GO:0005623
IEA
PLAZA Integrative Orthologycell ENSG00000154328
GO:0043231
IEA
PLAZA Integrative Orthologyintracellular membrane-bounded organelle ENSG00000154328
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen ENSG00000154328
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle ENSG00000154328
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part ENSG00000154328
GO:0005634
IEA
EggNOGmappernucleus
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen ENSG00000154328
GO:0005730
IEA
PLAZA Integrative Orthologynucleolus ENSG00000154328
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm ENSG00000154328
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen ENSG00000154328
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part ENSG00000154328
GO:0044464
IEA
PLAZA Integrative Orthologycell part ENSG00000154328
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part ENSG00000154328
GO:0044424
IEA
PLAZA Integrative Orthologyintracellular part ENSG00000154328
GO:0005622
IEA
PLAZA Integrative Orthologyintracellular ENSG00000154328
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen ENSG00000154328

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR010666Zinc finger, GRF-type
IPR015886DNA glycosylase/AP lyase, H2TH DNA-binding
IPR012319Formamidopyrimidine-DNA glycosylase, catalytic domain
IPR010979Ribosomal protein S13-like, H2TH

No MapMan annotations defined for this gene.
KeggID Description
K10569NEIL3; endonuclease VIII-like 3
No chloroplast target sequence found.