Gene: CC00G123500 (Cyclotella cryptica)

Overview top

Gene Identifier
CC00G123500
Transcript Identifier
CC00G123500.1
Gene Type
Coding gene
Location
g008916_00036 : 6076-7386 : negative

Family Information

Homologous gene family
HOM02SEM001412
(40 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM001436
(40 genes in 26 species)
specific family

Descriptions

eggnog_description
Ribosomal protein

Identifiers

Type Value
GeneNameg18274.t1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation
GO:0040007
IEA
EggNOGmappergrowth
GO:0009790
IEA
EggNOGmapperembryo development
GO:0006448
IEA
EggNOGmapperregulation of translational elongation
GO:0006407
IEA
EggNOGmapperrRNA export from nucleus
GO:0051168
IEA
EggNOGmappernuclear export
GO:0001731
IEA
EggNOGmapperformation of translation preinitiation complex
GO:0002119
IEA
EggNOGmappernematode larval development
GO:0016482
IEA
EggNOGmappercytosolic transport
GO:0006614
IEA
EggNOGmapperSRP-dependent cotranslational protein targeting to membrane
GO:0006415
IEA
EggNOGmappertranslational termination
GO:0032774
IEA
EggNOGmapperRNA biosynthetic process
GO:0042255
IEA
EggNOGmapperribosome assembly
GO:0050657
IEA
EggNOGmappernucleic acid transport
GO:0045903
IEA
EggNOGmapperpositive regulation of translational fidelity
GO:0045727
IEA
EggNOGmapperpositive regulation of translation
GO:0044764
IEA
EggNOGmappermulti-organism cellular process
GO:0044403
IEA
EggNOGmappersymbiont process
GO:0006915
IEA
EggNOGmapperapoptotic process
GO:0000028
IEA
EggNOGmapperribosomal small subunit assembly
GO:0000184
IEA
EggNOGmappernuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000003
IEA
EggNOGmapperreproduction
GO:0002181
IEA
EggNOGmappercytoplasmic translation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
EggNOGmapperstructural constituent of ribosome
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0005488
IEA
PLAZA Homology (enrichment)binding HOM02SEM001412
GO:0097159
IEA
PLAZA Homology (enrichment)organic cyclic compound binding HOM02SEM001412
GO:1901363
IEA
PLAZA Homology (enrichment)heterocyclic compound binding HOM02SEM001412
GO:0003723
IEA
PLAZA Homology (enrichment)RNA binding HOM02SEM001412
GO:0003676
IEA
PLAZA Homology (enrichment)nucleic acid binding HOM02SEM001412
GO:0070181
IEA
EggNOGmappersmall ribosomal subunit rRNA binding
GO:0005515
IEA
EggNOGmapperprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0044446
IEA
PLAZA Homology (enrichment)intracellular organelle part HOM02SEM001412
GO:0044422
IEA
PLAZA Homology (enrichment)organelle part HOM02SEM001412
GO:0015935
IEA
PLAZA Homology (enrichment)small ribosomal subunit HOM02SEM001412
GO:0044391
IEA
PLAZA Homology (enrichment)ribosomal subunit HOM02SEM001412
GO:0000228
IEA
EggNOGmappernuclear chromosome
GO:0022627
IEA
EggNOGmappercytosolic small ribosomal subunit
GO:0005886
IEA
EggNOGmapperplasma membrane
GO:0009507
IEA
EggNOGmapperchloroplast
GO:0009506
IEA
EggNOGmapperplasmodesma
GO:0005618
IEA
EggNOGmappercell wall
GO:0005730
IEA
EggNOGmappernucleolus
GO:0005654
IEA
EggNOGmappernucleoplasm
GO:0032040
IEA
EggNOGmappersmall-subunit processome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR014721Ribosomal protein S5 domain 2-type fold, subgroup
IPR000851Ribosomal protein S5
IPR005324Ribosomal protein S5, C-terminal
IPR020568Ribosomal protein S5 domain 2-type fold

No MapMan annotations defined for this gene.
KeggID Description
K07151STT3; dolichyl-diphosphooligosaccharide---protein glycosyltransferase [EC:2.4.99.18]
K02355fusA, GFM, EFG; elongation factor G
K00392sir; sulfite reductase (ferredoxin) [EC:1.8.7.1]
K02981RP-S2e, RPS2; small subunit ribosomal protein S2e
No chloroplast target sequence found.