Gene: AT5G66160 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G66160
Transcript Identifier
AT5G66160.1
Gene Type
Coding gene
Location
5 : 26445198-26446878 : positive

Family Information

Homologous gene family
HOM02SEM000221
(130 genes in 25 species)
specific family

Descriptions

Curated Summary
Encodes a receptor homology region transmembrane domain, ring H2 motif protein involved in transport of storage proteins to protein storage vacuoles. Co-localizes with DIP positive vesicles.
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Identifiers

Type Value
aliasRMR1
aliasATRMR1
aliasreceptor homology region transmembrane domain ring H2 motif protein 1
aliasARABIDOPSIS THALIANA RECEPTOR HOMOLOGY REGION TRANSMEMBRANE DOMAIN RING H2 MOTIF PROTEIN 1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IDA
Gene Ontologyintracellular protein transport1 2
GO:1903362
IEA
PLAZA Integrative Orthologyregulation of cellular protein catabolic process ENSG00000133135
GO:0009790
IEA
PLAZA Integrative Orthologyembryo development FBgn0004919
GO:1903364
IEA
PLAZA Integrative Orthologypositive regulation of cellular protein catabolic process ENSG00000133135
GO:0007498
IEA
PLAZA Integrative Orthologymesoderm development FBgn0004919
GO:0048519
IEA
PLAZA Integrative Orthologynegative regulation of biological process ENSG00000183579
GO:0048518
IEA
PLAZA Integrative Orthologypositive regulation of biological process ENSG00000133135
GO:0051246
IEA
PLAZA Integrative Orthologyregulation of protein metabolic process ENSG00000133135
GO:0051247
IEA
PLAZA Integrative Orthologypositive regulation of protein metabolic process ENSG00000133135
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process ENSG00000133135
GO:0048522
IEA
PLAZA Integrative Orthologypositive regulation of cellular process ENSG00000133135
GO:0001704
IEA
PLAZA Integrative Orthologyformation of primary germ layer FBgn0004919
GO:0001707
IEA
PLAZA Integrative Orthologymesoderm formation FBgn0004919
GO:0032446
IEA
PLAZA Integrative Orthologyprotein modification by small protein conjugation ENSG00000183579
GO:0065007
IEA
PLAZA Integrative Orthologybiological regulation ENSG00000133135
GO:0065008
IEA
PLAZA Integrative Orthologyregulation of biological quality ENSG00000133135
GO:0007267
IEA
PLAZA Integrative Orthologycell-cell signaling ENSG00000183579
GO:0043112
IEA
PLAZA Integrative Orthologyreceptor metabolic process ENSG00000183579
GO:0048646
IEA
PLAZA Integrative Orthologyanatomical structure formation involved in morphogenesis FBgn0004919
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process ENSG00000183579
GO:0043632
IEA
PLAZA Integrative Orthologymodification-dependent macromolecule catabolic process ENSG00000105428
GO:0009966
IEA
PLAZA Integrative Orthologyregulation of signal transduction ENSG00000183579
GO:0023057
IEA
PLAZA Integrative Orthologynegative regulation of signaling ENSG00000183579
GO:0023051
IEA
PLAZA Integrative Orthologyregulation of signaling ENSG00000183579
GO:0023052
IEA
PLAZA Integrative Orthologysignaling ENSG00000183579
GO:0033365
IEA
PLAZA Integrative Orthologyprotein localization to organelle ENSG00000133135
GO:0038018
IEA
PLAZA Integrative OrthologyWnt receptor catabolic process ENSG00000183579
GO:0032270
IEA
PLAZA Integrative Orthologypositive regulation of cellular protein metabolic process ENSG00000133135
GO:1904352
IEA
PLAZA Integrative Orthologypositive regulation of protein catabolic process in the vacuole ENSG00000133135
GO:1904350
IEA
PLAZA Integrative Orthologyregulation of protein catabolic process in the vacuole ENSG00000133135
GO:0009893
IEA
PLAZA Integrative Orthologypositive regulation of metabolic process ENSG00000133135
GO:0045786
IEA
PLAZA Integrative Orthologynegative regulation of cell cycle ENSG00000108523
GO:0009896
IEA
PLAZA Integrative Orthologypositive regulation of catabolic process ENSG00000133135
GO:0009653
IEA
PLAZA Integrative Orthologyanatomical structure morphogenesis FBgn0004919
GO:0009894
IEA
PLAZA Integrative Orthologyregulation of catabolic process ENSG00000133135
GO:0016192
IEA
PLAZA Integrative Orthologyvesicle-mediated transport FBgn0037442
GO:0060828
IEA
PLAZA Integrative Orthologyregulation of canonical Wnt signaling pathway ENSG00000183579
GO:0016197
IEA
PLAZA Integrative Orthologyendosomal transport FBgn0037442
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process ENSG00000133135
GO:0032268
IEA
PLAZA Integrative Orthologyregulation of cellular protein metabolic process ENSG00000133135
GO:0031331
IEA
PLAZA Integrative Orthologypositive regulation of cellular catabolic process ENSG00000133135
GO:0016579
IEA
PLAZA Integrative Orthologyprotein deubiquitination ENSG00000133135
GO:0060255
IEA
PLAZA Integrative Orthologyregulation of macromolecule metabolic process ENSG00000133135
GO:0000209
IEA
PLAZA Integrative Orthologyprotein polyubiquitination ENSG00000108523
GO:0061462
IEA
PLAZA Integrative Orthologyprotein localization to lysosome ENSG00000133135
GO:0043412
IEA
PLAZA Integrative Orthologymacromolecule modification SPAC3A12.03c
GO:0007369
IEA
PLAZA Integrative Orthologygastrulation FBgn0004919
GO:0031329
IEA
PLAZA Integrative Orthologyregulation of cellular catabolic process ENSG00000133135
GO:0010648
IEA
PLAZA Integrative Orthologynegative regulation of cell communication ENSG00000183579
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus ENSG00000183579
GO:0010646
IEA
PLAZA Integrative Orthologyregulation of cell communication ENSG00000183579
GO:0030111
IEA
PLAZA Integrative Orthologyregulation of Wnt signaling pathway ENSG00000183579
GO:0031325
IEA
PLAZA Integrative Orthologypositive regulation of cellular metabolic process ENSG00000133135
GO:0071704
IEA
PLAZA Integrative Orthologyorganic substance metabolic process SPAC3A12.03c
GO:0080090
IEA
PLAZA Integrative Orthologyregulation of primary metabolic process ENSG00000133135
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process ENSG00000133135
GO:0036211
IEA
PLAZA Integrative Orthologyprotein modification process SPAC3A12.03c
GO:0042176
IEA
PLAZA Integrative Orthologyregulation of protein catabolic process ENSG00000133135
GO:0051173
IEA
PLAZA Integrative Orthologypositive regulation of nitrogen compound metabolic process ENSG00000133135
GO:0051171
IEA
PLAZA Integrative Orthologyregulation of nitrogen compound metabolic process ENSG00000133135
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process SPAC3A12.03c
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process SPAC3A12.03c
GO:0032801
IEA
PLAZA Integrative Orthologyreceptor catabolic process ENSG00000183579
GO:0016055
IEA
PLAZA Integrative OrthologyWnt signaling pathway ENSG00000183579
GO:0072665
IEA
PLAZA Integrative Orthologyprotein localization to vacuole ENSG00000133135
GO:0051726
IEA
PLAZA Integrative Orthologyregulation of cell cycle ENSG00000108523
GO:0070647
IEA
PLAZA Integrative Orthologyprotein modification by small protein conjugation or removal SPAC3A12.03c
GO:0051603
IEA
PLAZA Integrative Orthologyproteolysis involved in cellular protein catabolic process ENSG00000105428
GO:0070646
IEA
PLAZA Integrative Orthologyprotein modification by small protein removal ENSG00000133135
GO:2000050
IEA
PLAZA Integrative Orthologyregulation of non-canonical Wnt signaling pathway ENSG00000183579
GO:0048729
IEA
PLAZA Integrative Orthologytissue morphogenesis FBgn0004919
GO:1905114
IEA
PLAZA Integrative Orthologycell surface receptor signaling pathway involved in cell-cell signaling ENSG00000183579
GO:0008152
IEA
PLAZA Integrative Orthologymetabolic process SPAC3A12.03c
GO:2000051
IEA
PLAZA Integrative Orthologynegative regulation of non-canonical Wnt signaling pathway ENSG00000183579
GO:0045732
IEA
PLAZA Integrative Orthologypositive regulation of protein catabolic process ENSG00000133135
GO:0044248
IEA
PLAZA Integrative Orthologycellular catabolic process ENSG00000105428
GO:0009888
IEA
PLAZA Integrative Orthologytissue development FBgn0004919
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process SPAC3A12.03c
GO:0048332
IEA
PLAZA Integrative Orthologymesoderm morphogenesis FBgn0004919
GO:0030178
IEA
PLAZA Integrative Orthologynegative regulation of Wnt signaling pathway ENSG00000183579
GO:0016567
IEA
PLAZA Integrative Orthologyprotein ubiquitination ENSG00000183579
GO:0019538
IEA
PLAZA Integrative Orthologyprotein metabolic process SPAC3A12.03c
GO:0009057
IEA
PLAZA Integrative Orthologymacromolecule catabolic process ENSG00000105428
GO:0009056
IEA
PLAZA Integrative Orthologycatabolic process ENSG00000105428
GO:0007154
IEA
PLAZA Integrative Orthologycell communication ENSG00000183579
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development FBgn0004919
GO:0006464
IEA
PLAZA Integrative Orthologycellular protein modification process SPAC3A12.03c
GO:1901565
IEA
PLAZA Integrative Orthologyorganonitrogen compound catabolic process ENSG00000105428
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development FBgn0004919
GO:1901564
IEA
PLAZA Integrative Orthologyorganonitrogen compound metabolic process SPAC3A12.03c
GO:0044257
IEA
PLAZA Integrative Orthologycellular protein catabolic process ENSG00000105428
GO:0007039
IEA
PLAZA Integrative Orthologyprotein catabolic process in the vacuole ENSG00000133135
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process SPAC3A12.03c
GO:0048583
IEA
PLAZA Integrative Orthologyregulation of response to stimulus ENSG00000183579
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process SPAC3A12.03c
GO:0009968
IEA
PLAZA Integrative Orthologynegative regulation of signal transduction ENSG00000183579
GO:0044265
IEA
PLAZA Integrative Orthologycellular macromolecule catabolic process ENSG00000105428
GO:0048585
IEA
PLAZA Integrative Orthologynegative regulation of response to stimulus ENSG00000183579
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process FBgn0004919
GO:0019941
IEA
PLAZA Integrative Orthologymodification-dependent protein catabolic process ENSG00000105428
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus ENSG00000183579
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process FBgn0004919
GO:0007165
IEA
PLAZA Integrative Orthologysignal transduction ENSG00000183579
GO:0030163
IEA
PLAZA Integrative Orthologyprotein catabolic process ENSG00000105428
GO:0044267
IEA
PLAZA Integrative Orthologycellular protein metabolic process SPAC3A12.03c
GO:1901575
IEA
PLAZA Integrative Orthologyorganic substance catabolic process ENSG00000105428
GO:0007166
IEA
PLAZA Integrative Orthologycell surface receptor signaling pathway ENSG00000183579
GO:0198738
IEA
PLAZA Integrative Orthologycell-cell signaling by wnt ENSG00000183579
GO:0009987
IEA
PLAZA Integrative Orthologycellular process SPAC3A12.03c
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle ENSG00000108523
GO:0006511
IEA
PLAZA Integrative Orthologyubiquitin-dependent protein catabolic process ENSG00000105428
GO:0090090
IEA
PLAZA Integrative Orthologynegative regulation of canonical Wnt signaling pathway ENSG00000183579
GO:0031647
IEA
PLAZA Integrative Orthologyregulation of protein stability ENSG00000133135
GO:0010604
IEA
PLAZA Integrative Orthologypositive regulation of macromolecule metabolic process ENSG00000133135
GO:0048598
IEA
PLAZA Integrative Orthologyembryonic morphogenesis FBgn0004919
GO:0006508
IEA
PLAZA Integrative Orthologyproteolysis ENSG00000105428
GO:0050789
IEA
PLAZA Integrative Orthologyregulation of biological process ENSG00000133135
GO:0035567
IEA
PLAZA Integrative Orthologynon-canonical Wnt signaling pathway ENSG00000183579

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IPI
Gene Ontologyprotein binding3 4
GO:0005515
IEA
InterProprotein binding
GO:0008270
ISS
Gene Ontologyzinc ion binding5
GO:0008270
IEA
InterProzinc ion binding
GO:0008233
ISS
Gene Ontologypeptidase activity5
GO:0043621
IPI
Gene Ontologyprotein self-association3 4
GO:0001664
IEA
PLAZA Integrative OrthologyG protein-coupled receptor binding ENSG00000183579
GO:0005109
IEA
PLAZA Integrative Orthologyfrizzled binding ENSG00000183579
GO:0061630
IEA
PLAZA Integrative Orthologyubiquitin protein ligase activity ENSG00000133135
GO:0005102
IEA
PLAZA Integrative Orthologysignaling receptor binding ENSG00000183579
GO:0016740
IEA
PLAZA Integrative Orthologytransferase activity ENSG00000113269
GO:0061659
IEA
PLAZA Integrative Orthologyubiquitin-like protein ligase activity ENSG00000133135
GO:0019787
IEA
PLAZA Integrative Orthologyubiquitin-like protein transferase activity ENSG00000113269
GO:0004842
IEA
PLAZA Integrative Orthologyubiquitin-protein transferase activity ENSG00000113269

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000306
IDA
Gene Ontologyextrinsic component of vacuolar membrane1 2
GO:0005576
ISM
Gene Ontologyextracellular region6
GO:0005783
IDA
Gene Ontologyendoplasmic reticulum3 4
GO:0044432
IEA
PLAZA Integrative Orthologyendoplasmic reticulum part ENSG00000105428
GO:0098852
IEA
PLAZA Integrative Orthologylytic vacuole membrane ENSG00000082996
GO:0043230
IEA
PLAZA Integrative Orthologyextracellular organelle ENSG00000163162
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen ENSG00000082996
GO:0005765
IEA
PLAZA Integrative Orthologylysosomal membrane ENSG00000082996
GO:0005886
IEA
PLAZA Integrative Orthologyplasma membrane ENSG00000183579
GO:0005764
IEA
PLAZA Integrative Orthologylysosome ENSG00000082996
GO:0005634
IEA
PLAZA Integrative Orthologynucleus ENSG00000082996
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen ENSG00000082996
GO:0031982
IEA
PLAZA Integrative Orthologyvesicle ENSG00000163162
GO:0031226
IEA
PLAZA Integrative Orthologyintrinsic component of plasma membrane ENSG00000183579
GO:0031224
IEA
PLAZA Integrative Orthologyintrinsic component of membrane ENSG00000183579
GO:0031984
IEA
PLAZA Integrative Orthologyorganelle subcompartment ENSG00000105428
GO:0044459
IEA
PLAZA Integrative Orthologyplasma membrane part ENSG00000183579
GO:0070062
IEA
PLAZA Integrative Orthologyextracellular exosome ENSG00000163162
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen ENSG00000082996
GO:0000323
IEA
PLAZA Integrative Orthologylytic vacuole ENSG00000082996
GO:0005615
IEA
PLAZA Integrative Orthologyextracellular space ENSG00000163162
GO:0042175
IEA
PLAZA Integrative Orthologynuclear outer membrane-endoplasmic reticulum membrane network ENSG00000105428
GO:0071944
IEA
PLAZA Integrative Orthologycell periphery ENSG00000183579
GO:1903561
IEA
PLAZA Integrative Orthologyextracellular vesicle ENSG00000163162
GO:0005794
IEA
PLAZA Integrative OrthologyGolgi apparatus ENSG00000101236
GO:0005789
IEA
PLAZA Integrative Orthologyendoplasmic reticulum membrane ENSG00000105428
GO:0005829
IEA
PLAZA Integrative Orthologycytosol ENSG00000082996
GO:0098827
IEA
PLAZA Integrative Orthologyendoplasmic reticulum subcompartment ENSG00000105428
GO:0005770
IEA
PLAZA Integrative Orthologylate endosome WBGene00023404
GO:0005654
IEA
PLAZA Integrative Orthologynucleoplasm ENSG00000082996
GO:0005887
IEA
PLAZA Integrative Orthologyintegral component of plasma membrane ENSG00000183579
GO:0005769
IEA
PLAZA Integrative Orthologyearly endosome WBGene00023404
GO:0005768
IEA
PLAZA Integrative Orthologyendosome FBgn0037442
GO:0031410
IEA
PLAZA Integrative Orthologycytoplasmic vesicle WBGene00023404
GO:0097708
IEA
PLAZA Integrative Orthologyintracellular vesicle WBGene00023404
GO:0044428
IEA
PLAZA Integrative Orthologynuclear part ENSG00000082996
GO:0044421
IEA
PLAZA Integrative Orthologyextracellular region part ENSG00000163162
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen ENSG00000082996
GO:0016021
IEA
PLAZA Integrative Orthologyintegral component of membrane ENSG00000183579

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR013083Zinc finger, RING/FYVE/PHD-type
IPR003137PA domain
IPR001841Zinc finger, RING-type

No MapMan annotations defined for this gene.
KeggID Description
K15692RNF13, RZF; E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]
No chloroplast target sequence found.