Gene: AT5G59340 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT5G59340
Transcript Identifier
AT5G59340.1
Gene Type
Coding gene
Location
5 : 23933408-23934627 : negative

Family Information

Homologous gene family
HOM02SEM004630
(17 genes in 2 species)
specific family

Descriptions

Curated Summary
Encodes a WUSCHEL-related homeobox gene family member with 65 amino acids in its homeodomain. Proteins in this family contain a sequence of eight residues (TLPLFPMH) downstream of the homeodomain called the WUS box. WOX2 has a putative Zinc finger domain downstream of the homeodomain. Transcripts are expressed in the egg cell, the zygote and the apical cell lineage and are reduced in met3-1 early embryos. This gene is necessary for cell divisions that form the apical embryo domain.
Show more...

Identifiers

Type Value
uniprotQ6X7K1
PlnTFDBHB
PlantTFDBWOX
aliasWOX2
aliasWUSCHEL related homeobox 2

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090451
IGI
Gene Ontologycotyledon boundary formation1 2
GO:0048825
IMP, IGI
Gene Ontologycotyledon development1 2 3 4
GO:0080167
IEP
Gene Ontologyresponse to karrikin5 6
GO:0008284
IGI
Gene Ontologypositive regulation of cell proliferation3 4
GO:0010654
IMP
Gene Ontologyapical cell fate commitment7 8
GO:0009942
IMP
Gene Ontologylongitudinal axis specification7 8
GO:0009880
IMP
Gene Ontologyembryonic pattern specification7 8
GO:0048598
IEA
PLAZA Integrative Orthologyembryonic morphogenesis AT2G01500
GO:0044271
IEA
PLAZA Integrative Orthologycellular nitrogen compound biosynthetic process AT2G17950
GO:0051510
IEA
PLAZA Integrative Orthologyregulation of unidimensional cell growth AT2G01500
GO:0022412
IEA
PLAZA Integrative Orthologycellular process involved in reproduction in multicellular organism AT2G17950
GO:0048508
IEA
PLAZA Integrative Orthologyembryonic meristem development AT1G46480
GO:0048507
IEA
PLAZA Integrative Orthologymeristem development AT1G46480
GO:0048589
IEA
PLAZA Integrative Orthologydevelopmental growth AT2G01500
GO:1901576
IEA
PLAZA Integrative Orthologyorganic substance biosynthetic process AT2G17950
GO:0006355
IEA
PLAZA Integrative Orthologyregulation of transcription, DNA-templated AT2G17950
GO:0048229
IEA
PLAZA Integrative Orthologygametophyte development AT2G01500
GO:0006351
IEA
PLAZA Integrative Orthologytranscription, DNA-templated AT2G17950
GO:0080166
IEA
PLAZA Integrative Orthologystomium development AT2G17950
GO:0007165
IEA
PLAZA Integrative Orthologysignal transduction AT1G46480
GO:0034641
IEA
PLAZA Integrative Orthologycellular nitrogen compound metabolic process AT2G17950
GO:0034645
IEA
PLAZA Integrative Orthologycellular macromolecule biosynthetic process AT2G17950
GO:0010556
IEA
PLAZA Integrative Orthologyregulation of macromolecule biosynthetic process AT2G17950
GO:0048466
IEA
PLAZA Integrative Orthologyandroecium development AT2G17950
GO:0048465
IEA
PLAZA Integrative Orthologycorolla development AT2G01500
GO:0048467
IEA
PLAZA Integrative Orthologygynoecium development AT2G01500
GO:0032989
IEA
PLAZA Integrative Orthologycellular component morphogenesis AT2G01500
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process AT2G17950
GO:0032504
IEA
PLAZA Integrative Orthologymulticellular organism reproduction AT2G17950
GO:1903506
IEA
PLAZA Integrative Orthologyregulation of nucleic acid-templated transcription AT2G17950
GO:0043170
IEA
PLAZA Integrative Orthologymacromolecule metabolic process AT2G17950
GO:0009058
IEA
PLAZA Integrative Orthologybiosynthetic process AT2G17950
GO:0007154
IEA
PLAZA Integrative Orthologycell communication AT1G46480
GO:0009059
IEA
PLAZA Integrative Orthologymacromolecule biosynthetic process AT2G17950
GO:0010223
IEA
PLAZA Integrative Orthologysecondary shoot formation AT2G17950
GO:0016049
IEA
PLAZA Integrative Orthologycell growth AT2G01500
GO:0019438
IEA
PLAZA Integrative Orthologyaromatic compound biosynthetic process AT2G17950
GO:0010067
IEA
PLAZA Integrative Orthologyprocambium histogenesis AT1G46480
GO:0010346
IEA
PLAZA Integrative Orthologyshoot axis formation AT2G17950
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis AT2G01500
GO:0034654
IEA
PLAZA Integrative Orthologynucleobase-containing compound biosynthetic process AT2G17950
GO:0010468
IEA
PLAZA Integrative Orthologyregulation of gene expression AT2G17950
GO:0010467
IEA
PLAZA Integrative Orthologygene expression AT2G17950
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization AT2G01500
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process AT2G17950
GO:0009889
IEA
PLAZA Integrative Orthologyregulation of biosynthetic process AT2G17950
GO:0009888
IEA
PLAZA Integrative Orthologytissue development AT1G46480
GO:0006139
IEA
PLAZA Integrative Orthologynucleobase-containing compound metabolic process AT2G17950
GO:0048446
IEA
PLAZA Integrative Orthologypetal morphogenesis AT2G01500
GO:0044249
IEA
PLAZA Integrative Orthologycellular biosynthetic process AT2G17950
GO:0008152
IEA
PLAZA Integrative Orthologymetabolic process AT2G17950
GO:0019827
IEA
PLAZA Integrative Orthologystem cell population maintenance AT2G17950
GO:0010073
IEA
PLAZA Integrative Orthologymeristem maintenance AT2G17950
GO:2001141
IEA
PLAZA Integrative Orthologyregulation of RNA biosynthetic process AT2G17950
GO:0090304
IEA
PLAZA Integrative Orthologynucleic acid metabolic process AT2G17950
GO:0010074
IEA
PLAZA Integrative Orthologymaintenance of meristem identity AT2G17950
GO:0048444
IEA
PLAZA Integrative Orthologyfloral organ morphogenesis AT2G01500
GO:0048443
IEA
PLAZA Integrative Orthologystamen development AT2G17950
GO:0009908
IEA
PLAZA Integrative Orthologyflower development AT2G01500
GO:0048440
IEA
PLAZA Integrative Orthologycarpel development AT2G01500
GO:0048445
IEA
PLAZA Integrative Orthologycarpel morphogenesis AT2G01500
GO:0048441
IEA
PLAZA Integrative Orthologypetal development AT2G01500
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process AT2G17950
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process AT2G17950
GO:0051171
IEA
PLAZA Integrative Orthologyregulation of nitrogen compound metabolic process AT2G17950
GO:0048314
IEA
PLAZA Integrative Orthologyembryo sac morphogenesis AT2G01500
GO:0022603
IEA
PLAZA Integrative Orthologyregulation of anatomical structure morphogenesis AT2G01500
GO:0048437
IEA
PLAZA Integrative Orthologyfloral organ development AT2G01500
GO:0060560
IEA
PLAZA Integrative Orthologydevelopmental growth involved in morphogenesis AT2G01500
GO:0048438
IEA
PLAZA Integrative Orthologyfloral whorl development AT2G01500
GO:0022604
IEA
PLAZA Integrative Orthologyregulation of cell morphogenesis AT2G01500
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process AT2G17950
GO:0010065
IEA
PLAZA Integrative Orthologyprimary meristem tissue development AT1G46480
GO:0080090
IEA
PLAZA Integrative Orthologyregulation of primary metabolic process AT2G17950
GO:0031326
IEA
PLAZA Integrative Orthologyregulation of cellular biosynthetic process AT2G17950
GO:0071704
IEA
PLAZA Integrative Orthologyorganic substance metabolic process AT2G17950
GO:0032774
IEA
PLAZA Integrative OrthologyRNA biosynthetic process AT2G17950
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus AT1G46480
GO:0098727
IEA
PLAZA Integrative Orthologymaintenance of cell number AT2G17950
GO:0060255
IEA
PLAZA Integrative Orthologyregulation of macromolecule metabolic process AT2G17950
GO:0090567
IEA
PLAZA Integrative Orthologyreproductive shoot system development AT2G01500
GO:0010492
IEA
PLAZA Integrative Orthologymaintenance of shoot apical meristem identity AT2G17950
GO:0018130
IEA
PLAZA Integrative Orthologyheterocycle biosynthetic process AT2G17950
GO:0019222
IEA
PLAZA Integrative Orthologyregulation of metabolic process AT2G17950
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process AT2G17950
GO:0046483
IEA
PLAZA Integrative Orthologyheterocycle metabolic process AT2G17950
GO:0001763
IEA
PLAZA Integrative Orthologymorphogenesis of a branching structure AT2G17950
GO:0051301
IEA
PLAZA Integrative Orthologycell division AT2G01500
GO:1901362
IEA
PLAZA Integrative Orthologyorganic cyclic compound biosynthetic process AT2G17950
GO:0009933
IEA
PLAZA Integrative Orthologymeristem structural organization AT2G17950
GO:1901360
IEA
PLAZA Integrative Orthologyorganic cyclic compound metabolic process AT2G17950
GO:0019219
IEA
PLAZA Integrative Orthologyregulation of nucleobase-containing compound metabolic process AT2G17950
GO:0010087
IEA
PLAZA Integrative Orthologyphloem or xylem histogenesis AT1G46480
GO:1905392
IEA
PLAZA Integrative Orthologyplant organ morphogenesis AT2G01500
GO:0090506
IEA
PLAZA Integrative Orthologyaxillary shoot meristem initiation AT2G17950
GO:1905393
IEA
PLAZA Integrative Orthologyplant organ formation AT2G17950
GO:0097659
IEA
PLAZA Integrative Orthologynucleic acid-templated transcription AT2G17950
GO:0023052
IEA
PLAZA Integrative Orthologysignaling AT1G46480
GO:0051252
IEA
PLAZA Integrative Orthologyregulation of RNA metabolic process AT2G17950
GO:0048532
IEA
PLAZA Integrative Orthologyanatomical structure arrangement AT2G17950
GO:0001558
IEA
PLAZA Integrative Orthologyregulation of cell growth AT2G01500
GO:0048653
IEA
PLAZA Integrative Orthologyanther development AT2G17950
GO:0040007
IEA
PLAZA Integrative Orthologygrowth AT2G01500
GO:0006725
IEA
PLAZA Integrative Orthologycellular aromatic compound metabolic process AT2G17950
GO:0009965
IEA
PLAZA Integrative Orthologyleaf morphogenesis AT2G01500
GO:0040008
IEA
PLAZA Integrative Orthologyregulation of growth AT2G01500
GO:0035670
IEA
PLAZA Integrative Orthologyplant-type ovary development AT2G01500
GO:0009561
IEA
PLAZA Integrative Orthologymegagametogenesis AT2G01500
GO:0000902
IEA
PLAZA Integrative Orthologycell morphogenesis AT2G01500
GO:0010014
IEA
PLAZA Integrative Orthologymeristem initiation AT2G17950
GO:0048481
IEA
PLAZA Integrative Orthologyplant ovule development AT2G01500
GO:0051128
IEA
PLAZA Integrative Orthologyregulation of cellular component organization AT2G01500
GO:2000112
IEA
PLAZA Integrative Orthologyregulation of cellular macromolecule biosynthetic process AT2G17950
GO:0048482
IEA
PLAZA Integrative Orthologyplant ovule morphogenesis AT2G01500
GO:0010016
IEA
PLAZA Integrative Orthologyshoot system morphogenesis AT2G01500
GO:0050793
IEA
PLAZA Integrative Orthologyregulation of developmental process AT2G01500
GO:0048638
IEA
PLAZA Integrative Orthologyregulation of developmental growth AT2G01500
GO:0009826
IEA
PLAZA Integrative Orthologyunidimensional cell growth AT2G01500
GO:0009553
IEA
PLAZA Integrative Orthologyembryo sac development AT2G01500
GO:0090696
IEA
PLAZA Integrative Orthologypost-embryonic plant organ development AT2G01500
GO:0090697
IEA
PLAZA Integrative Orthologypost-embryonic plant organ morphogenesis AT2G01500
GO:0090698
IEA
PLAZA Integrative Orthologypost-embryonic plant morphogenesis AT2G01500

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
ISS
Gene OntologyDNA-binding transcription factor activity9 10
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT1G46480

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISM
Gene Ontologynucleus11
GO:0048353
IEA
PLAZA Integrative Orthologyprimary endosperm nucleus AT2G01500
GO:0005829
IEA
PLAZA Integrative Orthologycytosol AT3G18010
GO:0005737
IEA
PLAZA Integrative Orthologycytoplasm AT3G18010
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part AT3G18010

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR009057Homeobox-like domain superfamily
IPR001356Homeobox domain

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.