Gene: AT3G28300 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT3G28300
Transcript Identifier
AT3G28300.1
Gene Type
Coding gene
Location
3 : 10566106-10567263 : positive

Family Information

Homologous gene family
HOM02SEM006517
(13 genes in 2 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
Protein of unknown function (DUF677)
Curated Summary
Possesses a transmembrane domain and a small region that has sequence similarities to integrins from fungi, insects and humans. Is localized to plasma membrane and cytoplasm.
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Identifiers

Type Value
uniprotP0DI78
uniprotP0DI79
aliasAT14A

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008360
IMP
Gene Ontologyregulation of cell shape1 2
GO:0009991
IEA
PLAZA Integrative Orthologyresponse to extracellular stimulus AT3G28270
GO:0007154
IEA
PLAZA Integrative Orthologycell communication AT3G28270
GO:1901701
IEA
PLAZA Integrative Orthologycellular response to oxygen-containing compound AT3G28270
GO:0042631
IEA
PLAZA Integrative Orthologycellular response to water deprivation AT3G28270
GO:1901700
IEA
PLAZA Integrative Orthologyresponse to oxygen-containing compound AT3G28270
GO:0009415
IEA
PLAZA Integrative Orthologyresponse to water AT3G28270
GO:0009414
IEA
PLAZA Integrative Orthologyresponse to water deprivation AT3G28270
GO:0009628
IEA
PLAZA Integrative Orthologyresponse to abiotic stimulus AT3G28270
GO:0009605
IEA
PLAZA Integrative Orthologyresponse to external stimulus AT3G28270
GO:0071496
IEA
PLAZA Integrative Orthologycellular response to external stimulus AT3G28270
GO:0033554
IEA
PLAZA Integrative Orthologycellular response to stress AT3G28270
GO:0071214
IEA
PLAZA Integrative Orthologycellular response to abiotic stimulus AT3G28270
GO:0010035
IEA
PLAZA Integrative Orthologyresponse to inorganic substance AT3G28270
GO:0070887
IEA
PLAZA Integrative Orthologycellular response to chemical stimulus AT3G28270
GO:0050896
IEA
PLAZA Integrative Orthologyresponse to stimulus AT3G28270
GO:0042221
IEA
PLAZA Integrative Orthologyresponse to chemical AT3G28270
GO:0006950
IEA
PLAZA Integrative Orthologyresponse to stress AT3G28270
GO:0001101
IEA
PLAZA Integrative Orthologyresponse to acid chemical AT3G28270
GO:0031668
IEA
PLAZA Integrative Orthologycellular response to extracellular stimulus AT3G28270
GO:0071462
IEA
PLAZA Integrative Orthologycellular response to water stimulus AT3G28270
GO:0051716
IEA
PLAZA Integrative Orthologycellular response to stimulus AT3G28270
GO:0104004
IEA
PLAZA Integrative Orthologycellular response to environmental stimulus AT3G28270
GO:0071229
IEA
PLAZA Integrative Orthologycellular response to acid chemical AT3G28270

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005488
IEA
PLAZA Integrative Orthologybinding AT3G28270
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding AT3G28270

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005886
IDA
ISS
TAS
Gene Ontologyplasma membrane1 2 3 4 5 6 7
GO:0008305
ISS
Gene Ontologyintegrin complex6 7
GO:0005737
IDA
ISS
TAS
Gene Ontologycytoplasm3 4 5 6 7
GO:0009507
ISM
Gene Ontologychloroplast8
GO:0044433
IEA
PLAZA Integrative Orthologycytoplasmic vesicle part AT3G28270
GO:0009898
IEA
PLAZA Integrative Orthologycytoplasmic side of plasma membrane AT3G28270
GO:0098552
IEA
PLAZA Integrative Orthologyside of membrane AT3G28270
GO:0005768
IEA
PLAZA Integrative Orthologyendosome AT3G28270
GO:0044440
IEA
PLAZA Integrative Orthologyendosomal part AT3G28270
GO:0031234
IEA
PLAZA Integrative Orthologyextrinsic component of cytoplasmic side of plasma membrane AT3G28270
GO:0031410
IEA
PLAZA Integrative Orthologycytoplasmic vesicle AT3G28270
GO:0031312
IEA
PLAZA Integrative Orthologyextrinsic component of organelle membrane AT3G28270
GO:0097708
IEA
PLAZA Integrative Orthologyintracellular vesicle AT3G28270
GO:0031313
IEA
PLAZA Integrative Orthologyextrinsic component of endosome membrane AT3G28270
GO:0044422
IEA
PLAZA Integrative Orthologyorganelle part AT3G28270
GO:0044446
IEA
PLAZA Integrative Orthologyintracellular organelle part AT3G28270
GO:0031090
IEA
PLAZA Integrative Orthologyorganelle membrane AT3G28270
GO:0098562
IEA
PLAZA Integrative Orthologycytoplasmic side of membrane AT3G28270
GO:0098588
IEA
PLAZA Integrative Orthologybounding membrane of organelle AT3G28270
GO:0031982
IEA
PLAZA Integrative Orthologyvesicle AT3G28270
GO:0012505
IEA
PLAZA Integrative Orthologyendomembrane system AT3G28270
GO:0010008
IEA
PLAZA Integrative Orthologyendosome membrane AT3G28270
GO:0019898
IEA
PLAZA Integrative Orthologyextrinsic component of membrane AT3G28270
GO:0019897
IEA
PLAZA Integrative Orthologyextrinsic component of plasma membrane AT3G28270
GO:0098805
IEA
PLAZA Integrative Orthologywhole membrane AT3G28270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR007749Protein of unknown function DUF677

No MapMan annotations defined for this gene.
No Kegg annotations defined for this gene.
No chloroplast target sequence found.