Gene: AT2G16950 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT2G16950
Transcript Identifier
AT2G16950.1
Gene Type
Coding gene
Location
2 : 7353939-7360637 : positive

Family Information

Homologous gene family
HOM02SEM001709
(35 genes in 24 species)
specific family
Orthologous gene family
ORTHO02SEM001870
(34 genes in 24 species)
specific family
Duplication type
Tandem duplicate

Descriptions

Description
transportin 1
Curated Summary
Nuclear import receptor for AtGRP7.
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Identifiers

Type Value
uniprotQ8H0U4
aliasTRANSPORTIN 1
aliasATTRN1
aliasTRN1

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Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0051170
IDA
Gene Ontologyimport into nucleus1 2
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation FBgn0024921
GO:0006909
IEA
PLAZA Integrative Orthologyphagocytosis FBgn0024921
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process FBgn0024921
GO:0044270
IEA
PLAZA Integrative Orthologycellular nitrogen compound catabolic process ENSG00000083312
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle YBR017C
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization YBR017C
GO:1901575
IEA
PLAZA Integrative Orthologyorganic substance catabolic process ENSG00000083312
GO:0090087
IEA
PLAZA Integrative Orthologyregulation of peptide transport FBgn0024921
GO:0032501
IEA
PLAZA Integrative Orthologymulticellular organismal process FBgn0024921
GO:0034641
IEA
PLAZA Integrative Orthologycellular nitrogen compound metabolic process ENSG00000083312
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process FBgn0024921
GO:0033157
IEA
PLAZA Integrative Orthologyregulation of intracellular protein transport FBgn0024921
GO:0035735
IEA
PLAZA Integrative Orthologyintraciliary transport involved in cilium assembly ENSG00000083312
GO:0044782
IEA
PLAZA Integrative Orthologycilium organization ENSG00000083312
GO:0044265
IEA
PLAZA Integrative Orthologycellular macromolecule catabolic process ENSG00000083312
GO:0051223
IEA
PLAZA Integrative Orthologyregulation of protein transport FBgn0024921
GO:0044260
IEA
PLAZA Integrative Orthologycellular macromolecule metabolic process ENSG00000083312
GO:0048732
IEA
PLAZA Integrative Orthologygland development FBgn0024921
GO:0007399
IEA
PLAZA Integrative Orthologynervous system development FBgn0024921
GO:0044772
IEA
PLAZA Integrative Orthologymitotic cell cycle phase transition YBR017C
GO:0048856
IEA
PLAZA Integrative Orthologyanatomical structure development FBgn0024921
GO:0007275
IEA
PLAZA Integrative Orthologymulticellular organism development FBgn0024921
GO:0009056
IEA
PLAZA Integrative Orthologycatabolic process ENSG00000083312
GO:0060341
IEA
PLAZA Integrative Orthologyregulation of cellular localization FBgn0024921
GO:0009057
IEA
PLAZA Integrative Orthologymacromolecule catabolic process ENSG00000083312
GO:1900180
IEA
PLAZA Integrative Orthologyregulation of protein localization to nucleus FBgn0024921
GO:0120031
IEA
PLAZA Integrative Orthologyplasma membrane bounded cell projection assembly ENSG00000083312
GO:0034655
IEA
PLAZA Integrative Orthologynucleobase-containing compound catabolic process ENSG00000083312
GO:0006928
IEA
PLAZA Integrative Orthologymovement of cell or subcellular component ENSG00000083312
GO:0044770
IEA
PLAZA Integrative Orthologycell cycle phase transition YBR017C
GO:0006807
IEA
PLAZA Integrative Orthologynitrogen compound metabolic process ENSG00000083312
GO:0048731
IEA
PLAZA Integrative Orthologysystem development FBgn0024921
GO:0042073
IEA
PLAZA Integrative Orthologyintraciliary transport ENSG00000083312
GO:0099118
IEA
PLAZA Integrative Orthologymicrotubule-based protein transport ENSG00000083312
GO:0032879
IEA
PLAZA Integrative Orthologyregulation of localization FBgn0024921
GO:0046822
IEA
PLAZA Integrative Orthologyregulation of nucleocytoplasmic transport FBgn0024921
GO:0006139
IEA
PLAZA Integrative Orthologynucleobase-containing compound metabolic process ENSG00000083312
GO:0044248
IEA
PLAZA Integrative Orthologycellular catabolic process ENSG00000083312
GO:0006897
IEA
PLAZA Integrative Orthologyendocytosis FBgn0024921
GO:0046700
IEA
PLAZA Integrative Orthologyheterocycle catabolic process ENSG00000083312
GO:0048569
IEA
PLAZA Integrative Orthologypost-embryonic animal organ development FBgn0024921
GO:0032880
IEA
PLAZA Integrative Orthologyregulation of protein localization FBgn0024921
GO:0060271
IEA
PLAZA Integrative Orthologycilium assembly ENSG00000083312
GO:0090304
IEA
PLAZA Integrative Orthologynucleic acid metabolic process ENSG00000083312
GO:0010970
IEA
PLAZA Integrative Orthologytransport along microtubule ENSG00000083312
GO:0010458
IEA
PLAZA Integrative Orthologyexit from mitosis YBR017C
GO:0098657
IEA
PLAZA Integrative Orthologyimport into cell FBgn0024921
GO:0051049
IEA
PLAZA Integrative Orthologyregulation of transport FBgn0024921
GO:0048285
IEA
PLAZA Integrative Orthologyorganelle fission YBR017C
GO:0006401
IEA
PLAZA Integrative OrthologyRNA catabolic process ENSG00000083312
GO:0044237
IEA
PLAZA Integrative Orthologycellular metabolic process ENSG00000083312
GO:0099111
IEA
PLAZA Integrative Orthologymicrotubule-based transport ENSG00000083312
GO:0044238
IEA
PLAZA Integrative Orthologyprimary metabolic process ENSG00000083312
GO:0002164
IEA
PLAZA Integrative Orthologylarval development FBgn0024921
GO:0006402
IEA
PLAZA Integrative OrthologymRNA catabolic process ENSG00000083312
GO:0051171
IEA
PLAZA Integrative Orthologyregulation of nitrogen compound metabolic process ENSG00000083312
GO:1903047
IEA
PLAZA Integrative Orthologymitotic cell cycle process YBR017C
GO:0070925
IEA
PLAZA Integrative Orthologyorganelle assembly ENSG00000083312
GO:0120036
IEA
PLAZA Integrative Orthologyplasma membrane bounded cell projection organization ENSG00000083312
GO:0061013
IEA
PLAZA Integrative Orthologyregulation of mRNA catabolic process ENSG00000083312
GO:0019439
IEA
PLAZA Integrative Orthologyaromatic compound catabolic process ENSG00000083312
GO:0080090
IEA
PLAZA Integrative Orthologyregulation of primary metabolic process ENSG00000083312
GO:0031323
IEA
PLAZA Integrative Orthologyregulation of cellular metabolic process ENSG00000083312
GO:0017038
IEA
PLAZA Integrative Orthologyprotein import YBR017C
GO:1903827
IEA
PLAZA Integrative Orthologyregulation of cellular protein localization FBgn0024921
GO:0098840
IEA
PLAZA Integrative Orthologyprotein transport along microtubule ENSG00000083312
GO:0031329
IEA
PLAZA Integrative Orthologyregulation of cellular catabolic process ENSG00000083312
GO:1903311
IEA
PLAZA Integrative Orthologyregulation of mRNA metabolic process ENSG00000083312
GO:0072594
IEA
PLAZA Integrative Orthologyestablishment of protein localization to organelle YBR017C
GO:0140014
IEA
PLAZA Integrative Orthologymitotic nuclear division YBR017C
GO:0032386
IEA
PLAZA Integrative Orthologyregulation of intracellular transport FBgn0024921
GO:0000280
IEA
PLAZA Integrative Orthologynuclear division YBR017C
GO:0016192
IEA
PLAZA Integrative Orthologyvesicle-mediated transport FBgn0024921
GO:0048542
IEA
PLAZA Integrative Orthologylymph gland development FBgn0024921
GO:0016070
IEA
PLAZA Integrative OrthologyRNA metabolic process ENSG00000083312
GO:0016071
IEA
PLAZA Integrative OrthologymRNA metabolic process ENSG00000083312
GO:0046483
IEA
PLAZA Integrative Orthologyheterocycle metabolic process ENSG00000083312
GO:0000278
IEA
PLAZA Integrative Orthologymitotic cell cycle YBR017C
GO:0048534
IEA
PLAZA Integrative Orthologyhematopoietic or lymphoid organ development FBgn0024921
GO:0043487
IEA
PLAZA Integrative Orthologyregulation of RNA stability ENSG00000083312
GO:0009894
IEA
PLAZA Integrative Orthologyregulation of catabolic process ENSG00000083312
GO:0043488
IEA
PLAZA Integrative Orthologyregulation of mRNA stability ENSG00000083312
GO:0030097
IEA
PLAZA Integrative Orthologyhemopoiesis FBgn0024921
GO:1901361
IEA
PLAZA Integrative Orthologyorganic cyclic compound catabolic process ENSG00000083312
GO:1901360
IEA
PLAZA Integrative Orthologyorganic cyclic compound metabolic process ENSG00000083312
GO:0019219
IEA
PLAZA Integrative Orthologyregulation of nucleobase-containing compound metabolic process ENSG00000083312
GO:0033365
IEA
PLAZA Integrative Orthologyprotein localization to organelle YBR017C
GO:0006606
IEA
PLAZA Integrative Orthologyprotein import into nucleus YBR017C
GO:0051252
IEA
PLAZA Integrative Orthologyregulation of RNA metabolic process ENSG00000083312
GO:0031503
IEA
PLAZA Integrative Orthologyprotein-containing complex localization ENSG00000083312
GO:0002376
IEA
PLAZA Integrative Orthologyimmune system process FBgn0024921
GO:0006725
IEA
PLAZA Integrative Orthologycellular aromatic compound metabolic process ENSG00000083312
GO:1904589
IEA
PLAZA Integrative Orthologyregulation of protein import FBgn0024921
GO:0065008
IEA
PLAZA Integrative Orthologyregulation of biological quality ENSG00000083312
GO:0042306
IEA
PLAZA Integrative Orthologyregulation of protein import into nucleus FBgn0024921
GO:0034504
IEA
PLAZA Integrative Orthologyprotein localization to nucleus YBR017C
GO:0070201
IEA
PLAZA Integrative Orthologyregulation of establishment of protein localization FBgn0024921
GO:0000060
IEA
PLAZA Integrative Orthologyprotein import into nucleus, translocation ENSG00000083312
GO:0030705
IEA
PLAZA Integrative Orthologycytoskeleton-dependent intracellular transport ENSG00000083312
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process ENSG00000083312
GO:0002520
IEA
PLAZA Integrative Orthologyimmune system development FBgn0024921
GO:0007017
IEA
PLAZA Integrative Orthologymicrotubule-based process ENSG00000083312
GO:0007018
IEA
PLAZA Integrative Orthologymicrotubule-based movement ENSG00000083312
GO:0048513
IEA
PLAZA Integrative Orthologyanimal organ development FBgn0024921
GO:0022008
IEA
PLAZA Integrative Orthologyneurogenesis FBgn0024921
GO:0022402
IEA
PLAZA Integrative Orthologycell cycle process YBR017C
GO:0030030
IEA
PLAZA Integrative Orthologycell projection organization ENSG00000083312
GO:0009791
IEA
PLAZA Integrative Orthologypost-embryonic development FBgn0024921
GO:0030031
IEA
PLAZA Integrative Orthologycell projection assembly ENSG00000083312
GO:0035166
IEA
PLAZA Integrative Orthologypost-embryonic hemopoiesis FBgn0024921
GO:0035167
IEA
PLAZA Integrative Orthologylarval lymph gland hemopoiesis FBgn0024921
GO:0035280
IGI
Gene OntologymiRNA loading onto RISC involved in gene silencing by miRNA3 4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008536
IEA
InterProRan GTPase binding
GO:0005488
IEA
InterProbinding
GO:0008565
IDA
ISS
Gene Ontologyprotein transporter activity1 2 5
GO:0097159
IEA
PLAZA Integrative Orthologyorganic cyclic compound binding ENSG00000083312
GO:0008139
IEA
PLAZA Integrative Orthologynuclear localization sequence binding YBR017C
GO:0005048
IEA
PLAZA Integrative Orthologysignal sequence binding YBR017C
GO:0033218
IEA
PLAZA Integrative Orthologyamide binding YBR017C
GO:0003676
IEA
PLAZA Integrative Orthologynucleic acid binding ENSG00000083312
GO:0042277
IEA
PLAZA Integrative Orthologypeptide binding YBR017C
GO:1901363
IEA
PLAZA Integrative Orthologyheterocyclic compound binding ENSG00000083312
GO:0003723
IEA
PLAZA Integrative OrthologyRNA binding ENSG00000083312
GO:0005515
IPI
Gene Ontologyprotein binding3 4

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005829
IDA
Gene Ontologycytosol6 7
GO:0005737
IDA
ISS
Gene Ontologycytoplasm1 2 5
GO:0005634
IDA
ISS
Gene Ontologynucleus1 2 5
GO:0005643
ISS
Gene Ontologynuclear pore5
GO:0005819
IEA
PLAZA Integrative Orthologyspindle SPAC2F3.06c
GO:0005935
IEA
PLAZA Integrative Orthologycellular bud neck YBR017C
GO:0044430
IEA
PLAZA Integrative Orthologycytoskeletal part SPAC2F3.06c
GO:0070013
IEA
PLAZA Integrative Orthologyintracellular organelle lumen SPAC2F3.06c
GO:0005933
IEA
PLAZA Integrative Orthologycellular bud YBR017C
GO:0005934
IEA
PLAZA Integrative Orthologycellular bud tip YBR017C
GO:0051233
IEA
PLAZA Integrative Orthologyspindle midzone SPAC2F3.06c
GO:0044421
IEA
PLAZA Integrative Orthologyextracellular region part ENSG00000083312
GO:0005929
IEA
PLAZA Integrative Orthologycilium ENSG00000083312
GO:0072686
IEA
PLAZA Integrative Orthologymitotic spindle SPAC2F3.06c
GO:0042995
IEA
PLAZA Integrative Orthologycell projection ENSG00000083312
GO:0120025
IEA
PLAZA Integrative Orthologyplasma membrane bounded cell projection ENSG00000083312
GO:0015630
IEA
PLAZA Integrative Orthologymicrotubule cytoskeleton SPAC2F3.06c
GO:1903561
IEA
PLAZA Integrative Orthologyextracellular vesicle ENSG00000083312
GO:0034399
IEA
PLAZA Integrative Orthologynuclear periphery SPAC2F3.06c
GO:0005856
IEA
PLAZA Integrative Orthologycytoskeleton SPAC2F3.06c
GO:0005615
IEA
PLAZA Integrative Orthologyextracellular space ENSG00000083312
GO:0031974
IEA
PLAZA Integrative Orthologymembrane-enclosed lumen SPAC2F3.06c
GO:0070062
IEA
PLAZA Integrative Orthologyextracellular exosome ENSG00000083312
GO:1990023
IEA
PLAZA Integrative Orthologymitotic spindle midzone SPAC2F3.06c
GO:0005576
IEA
PLAZA Integrative Orthologyextracellular region ENSG00000083312
GO:0031982
IEA
PLAZA Integrative Orthologyvesicle ENSG00000083312
GO:0031981
IEA
PLAZA Integrative Orthologynuclear lumen SPAC2F3.06c
GO:0043233
IEA
PLAZA Integrative Orthologyorganelle lumen SPAC2F3.06c
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle SPAC2F3.06c
GO:0043230
IEA
PLAZA Integrative Orthologyextracellular organelle ENSG00000083312
GO:0030427
IEA
PLAZA Integrative Orthologysite of polarized growth YBR017C
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle SPAC2F3.06c

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011989Armadillo-like helical
IPR001494Importin-beta, N-terminal domain
IPR016024Armadillo-type fold

No MapMan annotations defined for this gene.
KeggID Description
K18752TNPO1, IPO2, KPNB2; transportin-1
K02961RP-S17, MRPS17, rpsQ; small subunit ribosomal protein S17
No chloroplast target sequence found.