Gene: AT1G77680 (Arabidopsis thaliana)

Overview top

Gene Identifier
AT1G77680
Transcript Identifier
AT1G77680.1
Gene Type
Coding gene
Location
1 : 29192188-29195963 : negative

Family Information

Homologous gene family
HOM02SEM000487
(78 genes in 26 species)
specific family
Orthologous gene family
ORTHO02SEM000685
(62 genes in 26 species)
specific family

Descriptions

Description
Ribonuclease II/R family protein
Show more...

Identifiers

Type Value
uniprotQ0WPN0
uniprotP0DM58

Toolbox

Explore

Create

View

Browse

 

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0034427
IEA
InterPronuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'
GO:0030154
IEA
PLAZA Integrative Orthologycell differentiation WBGene00018612
GO:0045165
IEA
PLAZA Integrative Orthologycell fate commitment WBGene00018612
GO:0051276
IEA
PLAZA Integrative Orthologychromosome organization ENSG00000144535
GO:0048869
IEA
PLAZA Integrative Orthologycellular developmental process WBGene00018612
GO:0007049
IEA
PLAZA Integrative Orthologycell cycle ENSG00000144535
GO:0042127
IEA
PLAZA Integrative Orthologyregulation of cell proliferation ENSG00000144535
GO:0006996
IEA
PLAZA Integrative Orthologyorganelle organization ENSG00000144535
GO:0006399
IEA
PLAZA Integrative OrthologytRNA metabolic process FBgn0035111
GO:0051304
IEA
PLAZA Integrative Orthologychromosome separation ENSG00000144535
GO:0051306
IEA
PLAZA Integrative Orthologymitotic sister chromatid separation ENSG00000144535
GO:0032502
IEA
PLAZA Integrative Orthologydevelopmental process WBGene00018612
GO:0016078
IEA
PLAZA Integrative OrthologytRNA catabolic process FBgn0035111
GO:0140014
IEA
PLAZA Integrative Orthologymitotic nuclear division ENSG00000144535
GO:0000280
IEA
PLAZA Integrative Orthologynuclear division ENSG00000144535
GO:0045595
IEA
PLAZA Integrative Orthologyregulation of cell differentiation WBGene00018612
GO:0000278
IEA
PLAZA Integrative Orthologymitotic cell cycle ENSG00000144535
GO:1990074
IEA
PLAZA Integrative Orthologypolyuridylation-dependent mRNA catabolic process SPAC2C4.07c
GO:0008285
IEA
PLAZA Integrative Orthologynegative regulation of cell proliferation ENSG00000144535
GO:0008283
IEA
PLAZA Integrative Orthologycell proliferation ENSG00000144535
GO:0010586
IEA
PLAZA Integrative OrthologymiRNA metabolic process ENSG00000144535
GO:0010587
IEA
PLAZA Integrative OrthologymiRNA catabolic process ENSG00000144535
GO:0071840
IEA
PLAZA Integrative Orthologycellular component organization or biogenesis ENSG00000144535
GO:0016043
IEA
PLAZA Integrative Orthologycellular component organization ENSG00000144535
GO:0000070
IEA
PLAZA Integrative Orthologymitotic sister chromatid segregation ENSG00000144535
GO:0043632
IEA
PLAZA Integrative Orthologymodification-dependent macromolecule catabolic process SPAC2C4.07c
GO:0048523
IEA
PLAZA Integrative Orthologynegative regulation of cellular process ENSG00000144535
GO:0034660
IEA
PLAZA Integrative OrthologyncRNA metabolic process ENSG00000144535
GO:0034661
IEA
PLAZA Integrative OrthologyncRNA catabolic process ENSG00000144535
GO:0010453
IEA
PLAZA Integrative Orthologyregulation of cell fate commitment WBGene00018612
GO:0001708
IEA
PLAZA Integrative Orthologycell fate specification WBGene00018612
GO:0098813
IEA
PLAZA Integrative Orthologynuclear chromosome segregation ENSG00000144535
GO:0050794
IEA
PLAZA Integrative Orthologyregulation of cellular process ENSG00000144535
GO:0050793
IEA
PLAZA Integrative Orthologyregulation of developmental process WBGene00018612
GO:0048285
IEA
PLAZA Integrative Orthologyorganelle fission ENSG00000144535
GO:0007059
IEA
PLAZA Integrative Orthologychromosome segregation ENSG00000144535
GO:0022402
IEA
PLAZA Integrative Orthologycell cycle process ENSG00000144535
GO:0040034
IEA
PLAZA Integrative Orthologyregulation of development, heterochronic WBGene00018612
GO:1903047
IEA
PLAZA Integrative Orthologymitotic cell cycle process ENSG00000144535
GO:0042659
IEA
PLAZA Integrative Orthologyregulation of cell fate specification WBGene00018612
GO:0000819
IEA
PLAZA Integrative Orthologysister chromatid segregation ENSG00000144535

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000175
IEA
InterPro3'-5'-exoribonuclease activity
GO:0004540
ISS
Gene Ontologyribonuclease activity1
GO:0003723
ISS
Gene OntologyRNA binding1
GO:0000287
IEA
PLAZA Integrative Orthologymagnesium ion binding ENSG00000144535
GO:0043169
IEA
PLAZA Integrative Orthologycation binding ENSG00000144535
GO:0043167
IEA
PLAZA Integrative Orthologyion binding ENSG00000144535
GO:0046872
IEA
PLAZA Integrative Orthologymetal ion binding ENSG00000144535
GO:0005515
IEA
PLAZA Integrative Orthologyprotein binding ENSG00000144535
GO:0003727
IEA
PLAZA Integrative Orthologysingle-stranded RNA binding SPAC2C4.07c
GO:0008266
IEA
PLAZA Integrative Orthologypoly(U) RNA binding SPAC2C4.07c
GO:0008187
IEA
PLAZA Integrative Orthologypoly-pyrimidine tract binding SPAC2C4.07c

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005737
ISM
Gene Ontologycytoplasm2
GO:0036464
IEA
PLAZA Integrative Orthologycytoplasmic ribonucleoprotein granule SPAC2C4.07c
GO:0035770
IEA
PLAZA Integrative Orthologyribonucleoprotein granule SPAC2C4.07c
GO:1990904
IEA
PLAZA Integrative Orthologyribonucleoprotein complex SPAC2C4.07c
GO:0005844
IEA
PLAZA Integrative Orthologypolysome ENSG00000144535
GO:0032991
IEA
PLAZA Integrative Orthologyprotein-containing complex SPAC2C4.07c
GO:0044444
IEA
PLAZA Integrative Orthologycytoplasmic part SPAC2C4.07c
GO:0043232
IEA
PLAZA Integrative Orthologyintracellular non-membrane-bounded organelle SPAC2C4.07c
GO:0005829
IEA
PLAZA Integrative Orthologycytosol SPAC2C4.07c
GO:0043228
IEA
PLAZA Integrative Orthologynon-membrane-bounded organelle SPAC2C4.07c
GO:0043226
IEA
PLAZA Integrative Orthologyorganelle SPAC2C4.07c
GO:0000932
IEA
PLAZA Integrative OrthologyP-body SPAC2C4.07c
GO:0043229
IEA
PLAZA Integrative Orthologyintracellular organelle SPAC2C4.07c

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR028591DIS3-like exonuclease 2
IPR022966Ribonuclease II/R, conserved site
IPR012340Nucleic acid-binding, OB-fold

No MapMan annotations defined for this gene.
KeggID Description
K18758DIS3L2; DIS3-like exonuclease 2 [EC:3.1.13.-]
No chloroplast target sequence found.