Homologous gene family: HOM02SEM000026   top

Sequences
TPM Matrix
Heatmap
DE Matrix
Heatmap
Sub-families
ORTHO02SEM006204
(13 genes in 3 species)
ORTHO02SEM013979
(4 genes in 3 species)
ORTHO02SEM000044
(329 genes in 9 species)

Keywords

Overview of gene family content

The gene family HOM02SEM000026 has 517 genes in 9 species (90 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
Percentage of diatom genes which are targeted to the chloroplast :

The order of species in the graph is based on the phylogenetic species tree.

Toolbox

Explore

Create

View

 


Gene list


Index of genes with 1 constraints:

Page 1 of 26, showing 20 records out of 517 total, starting on record 1, ending on 20

gene_id species strand chr outlier
tho183220 tho + To_g18789 No
ptri43050 ptri - 20 No
gene4699 fcy + scaffold_16 No
Sro517_g158700 sro + Sro_contig517 No
ptri67380 ptri + 17 No
CC00G111110 cycr + g001036_00088 Yes
CC00G135450 cycr + g007299_00202 No
gene4504 fcy - scaffold_153 No
CC00G52490 cycr - g052911_00085 No
Sro3101_g343760 sro - Sro_contig3101 No
ptri102140 ptri + 12 No
ps00G123590 psm - scaffold_89 Yes
CC00G172480 cycr + g002789_00057 No
tho601600 tho - To_g36013 Yes
CC00G59270 cycr - g010324_00141 No
gene8413 fcy - scaffold_22 Yes
gene4701 fcy + scaffold_16 No
ps00G134500 psm + scaffold_109 No
ptri114200 ptri + 11 No
ps00G175350 psm + scaffold_3404 No

Download genes (select columns to include)

gene_id
species
strand
chr
outlier