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Data
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Gene family finder
Synteny plot
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Colinear region finder
Localization
Functional clusters
WGMapping
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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Family
ORTHO02SEM004169
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
CC00G119630
Cyclotella cryptica
CC00G123990
Cyclotella cryptica
fso174580
Fistulifera solaris
gene13355
Fragilariopsis cylindrus
gene5146
Fragilariopsis cylindrus
gene6439
Fragilariopsis cylindrus
gene6883
Fragilariopsis cylindrus
ps00G150500
Pseudo-nitzschia multiseries
ps00G175150
Pseudo-nitzschia multiseries
ps00G29870
Pseudo-nitzschia multiseries
ptri145490
Phaeodactylum tricornutum
ptri166570
Phaeodactylum tricornutum
ptri236130
Phaeodactylum tricornutum
ptri244160
Phaeodactylum tricornutum
ptri51170
Phaeodactylum tricornutum
sya00G105190
Synedra acus
sya00G167610
Synedra acus
sya00G226270
Synedra acus
sya00G267240
Synedra acus
sya00G54190
Synedra acus
Organisms
Phaeodactylum tricornutum (5 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (5 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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