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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Family
ORTHO02SEM000102
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
CC00G07460
Cyclotella cryptica
CC00G109430
Cyclotella cryptica
CC00G16360
Cyclotella cryptica
CC00G170920
Cyclotella cryptica
CC00G36700
Cyclotella cryptica
CC00G55650
Cyclotella cryptica
CC00G67460
Cyclotella cryptica
gene11973
Fragilariopsis cylindrus
gene7613
Fragilariopsis cylindrus
PSNMU-V1.4_AUG-EV-PASAV3_0001900
Pseudo-nitzschia multistriata
PSNMU-V1.4_AUG-EV-PASAV3_0006560
Pseudo-nitzschia multistriata
PSNMU-V1.4_AUG-EV-PASAV3_0011870
Pseudo-nitzschia multistriata
Sro3797_g351120
Seminavis robusta
Sro4347_g353790
Seminavis robusta
Sro882_g215390
Seminavis robusta
Sro882_g215400
Seminavis robusta
sya00G00810
Synedra acus
sya00G02410
Synedra acus
sya00G03630
Synedra acus
sya00G03650
Synedra acus
sya00G03850
Synedra acus
sya00G03860
Synedra acus
sya00G05200
Synedra acus
sya00G08050
Synedra acus
sya00G102460
Synedra acus
sya00G102480
Synedra acus
sya00G103790
Synedra acus
sya00G107990
Synedra acus
sya00G108000
Synedra acus
sya00G118010
Synedra acus
sya00G122890
Synedra acus
sya00G12700
Synedra acus
sya00G127080
Synedra acus
sya00G129570
Synedra acus
sya00G131120
Synedra acus
sya00G132220
Synedra acus
sya00G132510
Synedra acus
sya00G132540
Synedra acus
sya00G132550
Synedra acus
sya00G135050
Synedra acus
sya00G138170
Synedra acus
sya00G138980
Synedra acus
sya00G138990
Synedra acus
sya00G139000
Synedra acus
sya00G140740
Synedra acus
sya00G141990
Synedra acus
sya00G14200
Synedra acus
sya00G145620
Synedra acus
sya00G145630
Synedra acus
sya00G146660
Synedra acus
sya00G146680
Synedra acus
sya00G147590
Synedra acus
sya00G151520
Synedra acus
sya00G151530
Synedra acus
sya00G151540
Synedra acus
sya00G156690
Synedra acus
sya00G156700
Synedra acus
sya00G158080
Synedra acus
sya00G158260
Synedra acus
sya00G158680
Synedra acus
sya00G159220
Synedra acus
sya00G163720
Synedra acus
sya00G164680
Synedra acus
sya00G165350
Synedra acus
sya00G165360
Synedra acus
sya00G165500
Synedra acus
sya00G166090
Synedra acus
sya00G166100
Synedra acus
sya00G166110
Synedra acus
sya00G166450
Synedra acus
sya00G166460
Synedra acus
sya00G169540
Synedra acus
sya00G176780
Synedra acus
sya00G177030
Synedra acus
sya00G178460
Synedra acus
sya00G178470
Synedra acus
sya00G180670
Synedra acus
sya00G180750
Synedra acus
sya00G181920
Synedra acus
sya00G185030
Synedra acus
sya00G185780
Synedra acus
sya00G185790
Synedra acus
sya00G190450
Synedra acus
sya00G191040
Synedra acus
sya00G191050
Synedra acus
sya00G191570
Synedra acus
sya00G191580
Synedra acus
sya00G191590
Synedra acus
sya00G197450
Synedra acus
sya00G20260
Synedra acus
sya00G20370
Synedra acus
sya00G206270
Synedra acus
sya00G209520
Synedra acus
sya00G210000
Synedra acus
sya00G210010
Synedra acus
sya00G211460
Synedra acus
sya00G211470
Synedra acus
sya00G212310
Synedra acus
sya00G212320
Synedra acus
sya00G212950
Synedra acus
sya00G213310
Synedra acus
sya00G213320
Synedra acus
sya00G214840
Synedra acus
sya00G215880
Synedra acus
sya00G221970
Synedra acus
sya00G223800
Synedra acus
sya00G224090
Synedra acus
sya00G224770
Synedra acus
sya00G225180
Synedra acus
sya00G225580
Synedra acus
sya00G225640
Synedra acus
sya00G225650
Synedra acus
sya00G225660
Synedra acus
sya00G226290
Synedra acus
sya00G226300
Synedra acus
sya00G228520
Synedra acus
sya00G230820
Synedra acus
sya00G231090
Synedra acus
sya00G233920
Synedra acus
sya00G233930
Synedra acus
sya00G235330
Synedra acus
sya00G235340
Synedra acus
sya00G236000
Synedra acus
sya00G236010
Synedra acus
sya00G236900
Synedra acus
sya00G238580
Synedra acus
sya00G240800
Synedra acus
sya00G241730
Synedra acus
sya00G245830
Synedra acus
sya00G246540
Synedra acus
sya00G248000
Synedra acus
sya00G248190
Synedra acus
sya00G248200
Synedra acus
sya00G251060
Synedra acus
sya00G251150
Synedra acus
sya00G252530
Synedra acus
sya00G253490
Synedra acus
sya00G253990
Synedra acus
sya00G257750
Synedra acus
sya00G265790
Synedra acus
sya00G267320
Synedra acus
sya00G271160
Synedra acus
sya00G271170
Synedra acus
sya00G30870
Synedra acus
sya00G31020
Synedra acus
sya00G32780
Synedra acus
sya00G32790
Synedra acus
sya00G34740
Synedra acus
sya00G34780
Synedra acus
sya00G37100
Synedra acus
sya00G39950
Synedra acus
sya00G40140
Synedra acus
sya00G40830
Synedra acus
sya00G41750
Synedra acus
sya00G41760
Synedra acus
sya00G41940
Synedra acus
sya00G46240
Synedra acus
sya00G47340
Synedra acus
sya00G49590
Synedra acus
sya00G49700
Synedra acus
sya00G49780
Synedra acus
sya00G51020
Synedra acus
sya00G51030
Synedra acus
sya00G53870
Synedra acus
sya00G57690
Synedra acus
sya00G57850
Synedra acus
sya00G59140
Synedra acus
sya00G59160
Synedra acus
sya00G59170
Synedra acus
sya00G59300
Synedra acus
sya00G59310
Synedra acus
sya00G59790
Synedra acus
sya00G60910
Synedra acus
sya00G62110
Synedra acus
sya00G62270
Synedra acus
sya00G65920
Synedra acus
sya00G73130
Synedra acus
sya00G75970
Synedra acus
sya00G76470
Synedra acus
sya00G76910
Synedra acus
sya00G79860
Synedra acus
sya00G79870
Synedra acus
sya00G79880
Synedra acus
sya00G82170
Synedra acus
sya00G86450
Synedra acus
sya00G91980
Synedra acus
sya00G91990
Synedra acus
sya00G92690
Synedra acus
sya00G93150
Synedra acus
sya00G93160
Synedra acus
sya00G93190
Synedra acus
sya00G93200
Synedra acus
sya00G93210
Synedra acus
sya00G93260
Synedra acus
sya00G95800
Synedra acus
sya00G95810
Synedra acus
sya00G95820
Synedra acus
sya00G99520
Synedra acus
sya00G99530
Synedra acus
sya00G99780
Synedra acus
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (7 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (4 genes)
Synedra acus (184 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (3 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing