Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Family
HOM02SEM006180
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
tho257860
Thalassiosira oceanica
gene11505
Fragilariopsis cylindrus
AA0004G01410
Aureococcus anophagefferens
Sro98_g050620
Seminavis robusta
gene2568
Fragilariopsis cylindrus
PSNMU-V1.4_AUG-EV-PASAV3_0001320
Pseudo-nitzschia multistriata
ps00G31530
Pseudo-nitzschia multiseries
CC00G116200
Cyclotella cryptica
Cre16.g694208
Chlamydomonas reinhardtii
ps00G136730
Pseudo-nitzschia multiseries
tho336700
Thalassiosira oceanica
PSNMU-V1.4_AUG-EV-PASAV3_0006630
Pseudo-nitzschia multistriata
tps132520
Thalassiosira pseudonana
Naga_100001g104
Nannochloropsis gaditana
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing