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Colinear region finder
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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Family
HOM02SEM003425
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
ps00G168610
Pseudo-nitzschia multiseries
Sro229_g093000
Seminavis robusta
AT3G04970
Arabidopsis thaliana
Sro348_g123250
Seminavis robusta
Ec-21_003620
Ectocarpus siliculosus
sya00G204530
Synedra acus
Cre02.g090100
Chlamydomonas reinhardtii
Pp3c9_17640
Physcomitrella patens
CC00G14480
Cyclotella cryptica
Naga_100013g19
Nannochloropsis gaditana
emh498830
Emiliania huxleyi
AA0030G00400
Aureococcus anophagefferens
tps96260
Thalassiosira pseudonana
gene3832
Fragilariopsis cylindrus
CC00G108690
Cyclotella cryptica
Sro114_g056460
Seminavis robusta
AA0007G00280
Aureococcus anophagefferens
gene4574
Fragilariopsis cylindrus
sya00G74590
Synedra acus
CM19G01180
Cyanidioschyzon merolae
PSNMU-V1.4_AUG-EV-PASAV3_0007920
Pseudo-nitzschia multistriata
ptri12060
Phaeodactylum tricornutum
gene20647
Fragilariopsis cylindrus
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (3 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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