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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Family
HOM02SEM000746
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
tho119280
Thalassiosira oceanica
tho400500
Thalassiosira oceanica
tho577600
Thalassiosira oceanica
tho356340
Thalassiosira oceanica
tho564300
Thalassiosira oceanica
CC00G110470
Cyclotella cryptica
tho24160
Thalassiosira oceanica
tho225040
Thalassiosira oceanica
tps36400
Thalassiosira pseudonana
CC00G110590
Cyclotella cryptica
tho02320
Thalassiosira oceanica
tho473780
Thalassiosira oceanica
tho235600
Thalassiosira oceanica
tho429360
Thalassiosira oceanica
tho146100
Thalassiosira oceanica
tho15640
Thalassiosira oceanica
tho54340
Thalassiosira oceanica
CC00G145630
Cyclotella cryptica
tho69720
Thalassiosira oceanica
CC00G87590
Cyclotella cryptica
CC00G177980
Cyclotella cryptica
CC00G28500
Cyclotella cryptica
tho115580
Thalassiosira oceanica
tho643920
Thalassiosira oceanica
tho207000
Thalassiosira oceanica
tho504420
Thalassiosira oceanica
Sro1693_g291681
Seminavis robusta
tho600360
Thalassiosira oceanica
tho620840
Thalassiosira oceanica
tho518860
Thalassiosira oceanica
tho110240
Thalassiosira oceanica
tho421640
Thalassiosira oceanica
CC00G205450
Cyclotella cryptica
CC00G87580
Cyclotella cryptica
tho269800
Thalassiosira oceanica
CC00G178120
Cyclotella cryptica
Sro11_g008601
Seminavis robusta
CC00G183890
Cyclotella cryptica
tho402200
Thalassiosira oceanica
tho201080
Thalassiosira oceanica
tho262780
Thalassiosira oceanica
Sro138_g064901
Seminavis robusta
CC00G139280
Cyclotella cryptica
tho583900
Thalassiosira oceanica
Sro1294_g260160
Seminavis robusta
tho113620
Thalassiosira oceanica
CC00G84140
Cyclotella cryptica
tps233970
Thalassiosira pseudonana
tho567920
Thalassiosira oceanica
tho31100
Thalassiosira oceanica
tho586700
Thalassiosira oceanica
tho11860
Thalassiosira oceanica
CC00G67280
Cyclotella cryptica
CC00G14190
Cyclotella cryptica
ps00G73000
Pseudo-nitzschia multiseries
tps191670
Thalassiosira pseudonana
Ec-27_000590
Ectocarpus siliculosus
CC00G168030
Cyclotella cryptica
tho490840
Thalassiosira oceanica
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (35 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (15 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (4 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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