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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Family
HOM02SEM000308
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
CC00G210680
Cyclotella cryptica
CC00G59290
Cyclotella cryptica
ps00G90190
Pseudo-nitzschia multiseries
ps00G109810
Pseudo-nitzschia multiseries
tho139880
Thalassiosira oceanica
CC00G62800
Cyclotella cryptica
CC00G193290
Cyclotella cryptica
emh259170
Emiliania huxleyi
CC00G210670
Cyclotella cryptica
gene20368
Fragilariopsis cylindrus
tho163240
Thalassiosira oceanica
gene9974
Fragilariopsis cylindrus
ps00G130450
Pseudo-nitzschia multiseries
ccr195620
Chondrus crispus
fso12240
Fistulifera solaris
fso62700
Fistulifera solaris
ccr143000
Chondrus crispus
sya00G186810
Synedra acus
CC00G159220
Cyclotella cryptica
CC00G153750
Cyclotella cryptica
CC00G47840
Cyclotella cryptica
YIR008C
Saccharomyces cerevisiae strain S288C
gene13596
Fragilariopsis cylindrus
FBgn0011762
Drosophila melanogaster
CC00G42860
Cyclotella cryptica
PSNMU-V1.4_AUG-EV-PASAV3_0022040
Pseudo-nitzschia multistriata
ccr106200
Chondrus crispus
Cre07.g312350
Chlamydomonas reinhardtii
gene13679
Fragilariopsis cylindrus
ccr10700
Chondrus crispus
CC00G42660
Cyclotella cryptica
CC00G59300
Cyclotella cryptica
CC00G92420
Cyclotella cryptica
gene12613
Fragilariopsis cylindrus
tho590320
Thalassiosira oceanica
ps00G126680
Pseudo-nitzschia multiseries
AA0005G03650
Aureococcus anophagefferens
fso98130
Fistulifera solaris
CC00G201680
Cyclotella cryptica
PSNMU-V1.4_AUG-EV-PASAV3_0032260
Pseudo-nitzschia multistriata
CC00G92410
Cyclotella cryptica
ps00G11210
Pseudo-nitzschia multiseries
PSNMU-V1.4_AUG-EV-PASAV3_0020960
Pseudo-nitzschia multistriata
CC00G151980
Cyclotella cryptica
WBGene00004180
Caenorhabditis elegans
CC00G176220
Cyclotella cryptica
gene10032
Fragilariopsis cylindrus
CC00G67300
Cyclotella cryptica
CC00G56080
Cyclotella cryptica
gene3462
Fragilariopsis cylindrus
Pp3c9_1070
Physcomitrella patens
CC00G38470
Cyclotella cryptica
PSNMU-V1.4_AUG-EV-PASAV3_0089660
Pseudo-nitzschia multistriata
CC00G139380
Cyclotella cryptica
ps00G76590
Pseudo-nitzschia multiseries
pte266830
Paramecium tetraurelia
ccr97800
Chondrus crispus
CC00G139370
Cyclotella cryptica
CC00G145190
Cyclotella cryptica
CC00G151970
Cyclotella cryptica
tho228620
Thalassiosira oceanica
Sro1_g000510
Seminavis robusta
CC00G68530
Cyclotella cryptica
emh679510
Emiliania huxleyi
gene13678
Fragilariopsis cylindrus
CC00G75400
Cyclotella cryptica
ccr186220
Chondrus crispus
tho158000
Thalassiosira oceanica
AT5G41880
Arabidopsis thaliana
CC00G177010
Cyclotella cryptica
CC00G05190
Cyclotella cryptica
gene11350
Fragilariopsis cylindrus
ccr30520
Chondrus crispus
CC00G118720
Cyclotella cryptica
ps00G160950
Pseudo-nitzschia multiseries
tho611060
Thalassiosira oceanica
CC00G67130
Cyclotella cryptica
Naga_100351g4
Nannochloropsis gaditana
ps00G113060
Pseudo-nitzschia multiseries
CC00G56070
Cyclotella cryptica
CC00G07980
Cyclotella cryptica
CM15G03130
Cyanidioschyzon merolae
tho59300
Thalassiosira oceanica
CC00G56090
Cyclotella cryptica
CC00G104520
Cyclotella cryptica
ps00G79480
Pseudo-nitzschia multiseries
tho668980
Thalassiosira oceanica
ps00G19170
Pseudo-nitzschia multiseries
ptri46690
Phaeodactylum tricornutum
gene2062
Fragilariopsis cylindrus
ps00G74410
Pseudo-nitzschia multiseries
tps61150
Thalassiosira pseudonana
gene6331
Fragilariopsis cylindrus
gsu72210
Galdieria sulphuraria
CC00G148530
Cyclotella cryptica
WBGene00020761
Caenorhabditis elegans
CC00G210690
Cyclotella cryptica
PSNMU-V1.4_AUG-EV-PASAV3_0011040
Pseudo-nitzschia multistriata
SPAC6B12.10c
Schizosaccharomyces pombe
gene14441
Fragilariopsis cylindrus
ccr97700
Chondrus crispus
ENSG00000198056
Homo sapiens
Ec-06_009490
Ectocarpus siliculosus
tho418560
Thalassiosira oceanica
tho61960
Thalassiosira oceanica
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (10 genes)
Pseudo-nitzschia multiseries (11 genes)
Fistulifera solaris (3 genes)
Fragilariopsis cylindrus (12 genes)
Cyclotella cryptica (35 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (8 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (5 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
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