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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Family
HOM02SEM000201
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
pte618860
Paramecium tetraurelia
Pp3c1_15780
Physcomitrella patens
AA0029G00300
Aureococcus anophagefferens
ENSG00000175893
Homo sapiens
ENSG00000184307
Homo sapiens
emh198130
Emiliania huxleyi
Ec-08_001120
Ectocarpus siliculosus
WBGene00007637
Caenorhabditis elegans
AT2G40990
Arabidopsis thaliana
ENSG00000180776
Homo sapiens
Naga_100147g5
Nannochloropsis gaditana
FBgn0033474
Drosophila melanogaster
AT5G05070
Arabidopsis thaliana
SPBC13G1.07
Schizosaccharomyces pombe
ENSG00000163812
Homo sapiens
emh59950
Emiliania huxleyi
FBgn0031495
Drosophila melanogaster
AT3G18620
Arabidopsis thaliana
WBGene00044071
Caenorhabditis elegans
SPBC691.01
Schizosaccharomyces pombe
gsu12060
Galdieria sulphuraria
pte661540
Paramecium tetraurelia
Pp3c13_19220
Physcomitrella patens
tps09900
Thalassiosira pseudonana
Pp3c11_17220
Physcomitrella patens
emh692830
Emiliania huxleyi
pte687340
Paramecium tetraurelia
WBGene00014075
Caenorhabditis elegans
AT3G56930
Arabidopsis thaliana
WBGene00019257
Caenorhabditis elegans
AT3G26935
Arabidopsis thaliana
Naga_100019g54
Nannochloropsis gaditana
CC00G189230
Cyclotella cryptica
Cre16.g693800
Chlamydomonas reinhardtii
pte103550
Paramecium tetraurelia
ENSG00000204160
Homo sapiens
Pp3c12_14430
Physcomitrella patens
pte564660
Paramecium tetraurelia
fso203890
Fistulifera solaris
pte380760
Paramecium tetraurelia
AA0012G02390
Aureococcus anophagefferens
Pp3c2_20610
Physcomitrella patens
FBgn0027453
Drosophila melanogaster
ENSG00000156599
Homo sapiens
AA0006G04680
Aureococcus anophagefferens
FBgn0034202
Drosophila melanogaster
SPBC3H7.09
Schizosaccharomyces pombe
Cre07.g327700
Chlamydomonas reinhardtii
pte82820
Paramecium tetraurelia
emh110400
Emiliania huxleyi
Pp3c14_14940
Physcomitrella patens
pte418330
Paramecium tetraurelia
pte373970
Paramecium tetraurelia
pte732400
Paramecium tetraurelia
YDR126W
Saccharomyces cerevisiae strain S288C
ENSG00000102383
Homo sapiens
Cre01.g007200
Chlamydomonas reinhardtii
ENSG00000136247
Homo sapiens
pte221470
Paramecium tetraurelia
Pp3c16_1360
Physcomitrella patens
emh570900
Emiliania huxleyi
CM06G00750
Cyanidioschyzon merolae
Ec-06_000620
Ectocarpus siliculosus
emh706500
Emiliania huxleyi
AT3G51390
Arabidopsis thaliana
ccr47020
Chondrus crispus
pte791590
Paramecium tetraurelia
pte150890
Paramecium tetraurelia
pte617220
Paramecium tetraurelia
Pp3c4_16650
Physcomitrella patens
pte571230
Paramecium tetraurelia
AT2G14255
Arabidopsis thaliana
SPAC2F7.10
Schizosaccharomyces pombe
ENSG00000186908
Homo sapiens
Ec-11_004460
Ectocarpus siliculosus
Sro1100_g241280
Seminavis robusta
tho464200
Thalassiosira oceanica
pte602860
Paramecium tetraurelia
Cre10.g446700
Chlamydomonas reinhardtii
Ec-07_003330
Ectocarpus siliculosus
pte254360
Paramecium tetraurelia
pte722700
Paramecium tetraurelia
ENSG00000177108
Homo sapiens
AT3G56920
Arabidopsis thaliana
FBgn0260941
Drosophila melanogaster
ENSG00000099904
Homo sapiens
pte337120
Paramecium tetraurelia
AA0003G05960
Aureococcus anophagefferens
ps00G34760
Pseudo-nitzschia multiseries
pte412020
Paramecium tetraurelia
CM04G01190
Cyanidioschyzon merolae
ccr33700
Chondrus crispus
pte705200
Paramecium tetraurelia
Cre09.g394050
Chlamydomonas reinhardtii
pte706240
Paramecium tetraurelia
AT5G41060
Arabidopsis thaliana
CM09G02260
Cyanidioschyzon merolae
pte705540
Paramecium tetraurelia
pte698660
Paramecium tetraurelia
ptri161480
Phaeodactylum tricornutum
SPBC2F12.15c
Schizosaccharomyces pombe
gsu115840
Galdieria sulphuraria
AT4G24630
Arabidopsis thaliana
YLR246W
Saccharomyces cerevisiae strain S288C
emh301350
Emiliania huxleyi
pte356410
Paramecium tetraurelia
pte669860
Paramecium tetraurelia
ENSG00000174165
Homo sapiens
pte119850
Paramecium tetraurelia
Ec-28_001990
Ectocarpus siliculosus
ccr45760
Chondrus crispus
emh498030
Emiliania huxleyi
WBGene00018009
Caenorhabditis elegans
Pp3c14_14250
Physcomitrella patens
WBGene00012718
Caenorhabditis elegans
WBGene00020694
Caenorhabditis elegans
ENSG00000175048
Homo sapiens
AT5G20350
Arabidopsis thaliana
emh447890
Emiliania huxleyi
YNL326C
Saccharomyces cerevisiae strain S288C
Cre01.g035200
Chlamydomonas reinhardtii
YDR459C
Saccharomyces cerevisiae strain S288C
ENSG00000188706
Homo sapiens
ENSG00000163958
Homo sapiens
Ec-07_001260
Ectocarpus siliculosus
WBGene00012948
Caenorhabditis elegans
gene1287
Fragilariopsis cylindrus
AT5G50020
Arabidopsis thaliana
ENSG00000104219
Homo sapiens
AA0579G00020
Aureococcus anophagefferens
Pp3c17_5900
Physcomitrella patens
AT3G48760
Arabidopsis thaliana
Pp3c4_7570
Physcomitrella patens
pte653230
Paramecium tetraurelia
FBgn0029137
Drosophila melanogaster
Ec-28_003460
Ectocarpus siliculosus
CM06G00070
Cyanidioschyzon merolae
fso42900
Fistulifera solaris
emh655490
Emiliania huxleyi
ENSG00000177054
Homo sapiens
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (5 genes)
Ectocarpus siliculosus (7 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (17 genes)
Drosophila melanogaster (6 genes)
Caenorhabditis elegans (8 genes)
Saccharomyces cerevisiae strain S288C (4 genes)
Schizosaccharomyces pombe (5 genes)
Arabidopsis thaliana (13 genes)
Cyanidioschyzon merolae (4 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (10 genes)
Paramecium tetraurelia (28 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (11 genes)
Chlamydomonas reinhardtii (6 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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