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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Family
HOM02SEM000071
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
WBGene00008861
Caenorhabditis elegans
AT5G50260
Arabidopsis thaliana
pte517520
Paramecium tetraurelia
Pp3c21_12340
Physcomitrella patens
emh742860
Emiliania huxleyi
pte28890
Paramecium tetraurelia
Cre09.g407700
Chlamydomonas reinhardtii
AA0031G00140
Aureococcus anophagefferens
WBGene00016306
Caenorhabditis elegans
WBGene00013072
Caenorhabditis elegans
AT5G43060
Arabidopsis thaliana
AT1G09850
Arabidopsis thaliana
tho270120
Thalassiosira oceanica
gene930
Fragilariopsis cylindrus
Cre01.g010832
Chlamydomonas reinhardtii
Naga_100288g3
Nannochloropsis gaditana
AT4G11320
Arabidopsis thaliana
gene11771
Fragilariopsis cylindrus
pte161430
Paramecium tetraurelia
emh517250
Emiliania huxleyi
ENSG00000109861
Homo sapiens
Pp3c2_6240
Physcomitrella patens
ENSG00000256043
Homo sapiens
pte761220
Paramecium tetraurelia
WBGene00019986
Caenorhabditis elegans
PSNMU-V1.4_AUG-EV-PASAV3_0081140
Pseudo-nitzschia multistriata
AA0039G00540
Aureococcus anophagefferens
ENSG00000136943
Homo sapiens
Sro541_g163220
Seminavis robusta
Naga_100049g37
Nannochloropsis gaditana
WBGene00013076
Caenorhabditis elegans
Sro1051_g235710
Seminavis robusta
WBGene00010204
Caenorhabditis elegans
fso162410
Fistulifera solaris
tho628500
Thalassiosira oceanica
AT4G11310
Arabidopsis thaliana
AA0003G02650
Aureococcus anophagefferens
pte666700
Paramecium tetraurelia
WBGene00008231
Caenorhabditis elegans
AT2G27420
Arabidopsis thaliana
Sro252_g099720
Seminavis robusta
AT3G45310
Arabidopsis thaliana
FBgn0033875
Drosophila melanogaster
ENSG00000135047
Homo sapiens
PSNMU-V1.4_AUG-EV-PASAV3_0092520
Pseudo-nitzschia multistriata
pte395380
Paramecium tetraurelia
Pp3c19_6730
Physcomitrella patens
ENSG00000164733
Homo sapiens
tps40840
Thalassiosira pseudonana
gene4145
Fragilariopsis cylindrus
gene16784
Fragilariopsis cylindrus
ptri135860
Phaeodactylum tricornutum
AA0011G01000
Aureococcus anophagefferens
pte622380
Paramecium tetraurelia
PSNMU-V1.4_AUG-EV-PASAV3_0037440
Pseudo-nitzschia multistriata
Naga_101856g2
Nannochloropsis gaditana
tho81160
Thalassiosira oceanica
tps196790
Thalassiosira pseudonana
Sro971_g226500
Seminavis robusta
ENSG00000142910
Homo sapiens
pte29030
Paramecium tetraurelia
Ec-27_000190
Ectocarpus siliculosus
CC00G203270
Cyclotella cryptica
pte440160
Paramecium tetraurelia
ENSG00000103811
Homo sapiens
AA0009G03190
Aureococcus anophagefferens
gene6733
Fragilariopsis cylindrus
gene17832
Fragilariopsis cylindrus
ENSG00000143387
Homo sapiens
ENSG00000263238
Homo sapiens
FBgn0033873
Drosophila melanogaster
AA0001G00180
Aureococcus anophagefferens
AA0009G02980
Aureococcus anophagefferens
pte619100
Paramecium tetraurelia
Cre08.g381050
Chlamydomonas reinhardtii
pte124210
Paramecium tetraurelia
AT1G02305
Arabidopsis thaliana
Sro842_g209660
Seminavis robusta
ps00G175580
Pseudo-nitzschia multiseries
Ec-17_004090
Ectocarpus siliculosus
pte614920
Paramecium tetraurelia
pte305890
Paramecium tetraurelia
AA0003G00920
Aureococcus anophagefferens
WBGene00000781
Caenorhabditis elegans
pte723280
Paramecium tetraurelia
tho565700
Thalassiosira oceanica
AT1G29110
Arabidopsis thaliana
pte245080
Paramecium tetraurelia
WBGene00000782
Caenorhabditis elegans
pte63590
Paramecium tetraurelia
pte181520
Paramecium tetraurelia
CC00G181920
Cyclotella cryptica
gene20457
Fragilariopsis cylindrus
tps107860
Thalassiosira pseudonana
WBGene00009158
Caenorhabditis elegans
Ec-06_006050
Ectocarpus siliculosus
WBGene00016300
Caenorhabditis elegans
FBgn0037396
Drosophila melanogaster
fso79330
Fistulifera solaris
Pp3c14_8830
Physcomitrella patens
ptri11580
Phaeodactylum tricornutum
fso60850
Fistulifera solaris
ENSG00000174080
Homo sapiens
Ec-14_001100
Ectocarpus siliculosus
Pp3c13_8810
Physcomitrella patens
WBGene00021070
Caenorhabditis elegans
AT3G43960
Arabidopsis thaliana
FBgn0030521
Drosophila melanogaster
pte244020
Paramecium tetraurelia
pte535550
Paramecium tetraurelia
fso186330
Fistulifera solaris
pte342630
Paramecium tetraurelia
AT4G01610
Arabidopsis thaliana
emh150880
Emiliania huxleyi
AA0012G01380
Aureococcus anophagefferens
tps213650
Thalassiosira pseudonana
pte601000
Paramecium tetraurelia
AA0016G01630
Aureococcus anophagefferens
FBgn0013770
Drosophila melanogaster
Cre07.g333000
Chlamydomonas reinhardtii
emh589610
Emiliania huxleyi
CC00G37610
Cyclotella cryptica
AA0034G00500
Aureococcus anophagefferens
WBGene00019314
Caenorhabditis elegans
sya00G203140
Synedra acus
FBgn0034443
Drosophila melanogaster
pte336020
Paramecium tetraurelia
WBGene00012747
Caenorhabditis elegans
AA0063G00100
Aureococcus anophagefferens
pte27270
Paramecium tetraurelia
WBGene00044760
Caenorhabditis elegans
pte624630
Paramecium tetraurelia
Pp3c10_7510
Physcomitrella patens
AT5G45890
Arabidopsis thaliana
AT3G48350
Arabidopsis thaliana
ps00G189280
Pseudo-nitzschia multiseries
tps108160
Thalassiosira pseudonana
AA0005G04720
Aureococcus anophagefferens
sya00G162510
Synedra acus
pte592060
Paramecium tetraurelia
ps00G28360
Pseudo-nitzschia multiseries
pte325710
Paramecium tetraurelia
AA0004G04030
Aureococcus anophagefferens
pte570120
Paramecium tetraurelia
fso16990
Fistulifera solaris
ps00G66790
Pseudo-nitzschia multiseries
AT3G48340
Arabidopsis thaliana
CC00G191610
Cyclotella cryptica
pte48070
Paramecium tetraurelia
AA0002G03030
Aureococcus anophagefferens
pte711280
Paramecium tetraurelia
AA0028G00930
Aureococcus anophagefferens
FBgn0260462
Drosophila melanogaster
WBGene00011102
Caenorhabditis elegans
pte426550
Paramecium tetraurelia
FBgn0033874
Drosophila melanogaster
fso34210
Fistulifera solaris
gene13220
Fragilariopsis cylindrus
FBgn0250848
Drosophila melanogaster
AT2G22160
Arabidopsis thaliana
WBGene00007055
Caenorhabditis elegans
emh528080
Emiliania huxleyi
emh230300
Emiliania huxleyi
ENSG00000163131
Homo sapiens
pte194130
Paramecium tetraurelia
emh39500
Emiliania huxleyi
pte253010
Paramecium tetraurelia
Sro72_g039650
Seminavis robusta
pte538120
Paramecium tetraurelia
ENSG00000172543
Homo sapiens
AA0013G01170
Aureococcus anophagefferens
AT4G16190
Arabidopsis thaliana
Pp3c3_17920
Physcomitrella patens
Sro453_g146200
Seminavis robusta
WBGene00000776
Caenorhabditis elegans
emh740250
Emiliania huxleyi
PSNMU-V1.4_AUG-EV-PASAV3_0002330
Pseudo-nitzschia multistriata
ps00G77660
Pseudo-nitzschia multiseries
tps224940
Thalassiosira pseudonana
pte250650
Paramecium tetraurelia
AT2G21430
Arabidopsis thaliana
pte656940
Paramecium tetraurelia
AA0004G01090
Aureococcus anophagefferens
pte782440
Paramecium tetraurelia
Sro165_g073770
Seminavis robusta
AA0003G01610
Aureococcus anophagefferens
pte355330
Paramecium tetraurelia
fso172790
Fistulifera solaris
AT4G36880
Arabidopsis thaliana
FBgn0034709
Drosophila melanogaster
fso167360
Fistulifera solaris
ps00G163960
Pseudo-nitzschia multiseries
AA0063G00090
Aureococcus anophagefferens
Pp3c18_11500
Physcomitrella patens
pte472000
Paramecium tetraurelia
AT1G29090
Arabidopsis thaliana
tho09500
Thalassiosira oceanica
AA0698G00010
Aureococcus anophagefferens
pte485030
Paramecium tetraurelia
ptri207780
Phaeodactylum tricornutum
AA0246G00020
Aureococcus anophagefferens
ENSG00000137251
Homo sapiens
ps00G24080
Pseudo-nitzschia multiseries
AT3G19390
Arabidopsis thaliana
AA0002G03020
Aureococcus anophagefferens
WBGene00000784
Caenorhabditis elegans
pte478820
Paramecium tetraurelia
gene6062
Fragilariopsis cylindrus
pte372850
Paramecium tetraurelia
AT1G06260
Arabidopsis thaliana
pte779000
Paramecium tetraurelia
tho392820
Thalassiosira oceanica
pte319670
Paramecium tetraurelia
AT4G39090
Arabidopsis thaliana
sya00G04120
Synedra acus
CC00G195600
Cyclotella cryptica
AA0002G02760
Aureococcus anophagefferens
pte195310
Paramecium tetraurelia
FBgn0032228
Drosophila melanogaster
WBGene00000786
Caenorhabditis elegans
pte517540
Paramecium tetraurelia
pte598100
Paramecium tetraurelia
AA0058G00350
Aureococcus anophagefferens
Pp3c9_5330
Physcomitrella patens
WBGene00021072
Caenorhabditis elegans
pte688570
Paramecium tetraurelia
tps79140
Thalassiosira pseudonana
AA0001G02770
Aureococcus anophagefferens
Naga_100022g13
Nannochloropsis gaditana
WBGene00000785
Caenorhabditis elegans
ps00G160050
Pseudo-nitzschia multiseries
AT3G19400
Arabidopsis thaliana
AT1G02300
Arabidopsis thaliana
pte351150
Paramecium tetraurelia
Naga_100402g1
Nannochloropsis gaditana
AA0120G00020
Aureococcus anophagefferens
WBGene00022026
Caenorhabditis elegans
AA0001G05530
Aureococcus anophagefferens
pte295130
Paramecium tetraurelia
AA0031G00290
Aureococcus anophagefferens
WBGene00022189
Caenorhabditis elegans
CC00G200610
Cyclotella cryptica
pte05070
Paramecium tetraurelia
AT2G34080
Arabidopsis thaliana
Cre02.g095087
Chlamydomonas reinhardtii
AT1G20850
Arabidopsis thaliana
Pp3c8_20370
Physcomitrella patens
pte566070
Paramecium tetraurelia
pte206600
Paramecium tetraurelia
pte440180
Paramecium tetraurelia
AA0003G05210
Aureococcus anophagefferens
AT4G35350
Arabidopsis thaliana
Ec-00_008060
Ectocarpus siliculosus
sya00G262980
Synedra acus
Ec-01_006960
Ectocarpus siliculosus
AA0004G00410
Aureococcus anophagefferens
AA0006G05550
Aureococcus anophagefferens
AT3G49340
Arabidopsis thaliana
tps106950
Thalassiosira pseudonana
PSNMU-V1.4_AUG-EV-PASAV3_0006100
Pseudo-nitzschia multistriata
Naga_100039g23
Nannochloropsis gaditana
pte74260
Paramecium tetraurelia
Naga_100270g8
Nannochloropsis gaditana
Naga_100005g81
Nannochloropsis gaditana
gene21010
Fragilariopsis cylindrus
AT3G54940
Arabidopsis thaliana
pte626450
Paramecium tetraurelia
pte480340
Paramecium tetraurelia
AT1G47128
Arabidopsis thaliana
Pp3c23_20820
Physcomitrella patens
FBgn0034229
Drosophila melanogaster
AT4G23520
Arabidopsis thaliana
emh739650
Emiliania huxleyi
CC00G37620
Cyclotella cryptica
WBGene00013764
Caenorhabditis elegans
pte736430
Paramecium tetraurelia
Cre03.g196250
Chlamydomonas reinhardtii
Sro1847_g301410
Seminavis robusta
WBGene00009347
Caenorhabditis elegans
AT1G29080
Arabidopsis thaliana
Cre05.g247851
Chlamydomonas reinhardtii
Cre08.g358522
Chlamydomonas reinhardtii
fso189610
Fistulifera solaris
AT5G60360
Arabidopsis thaliana
pte33250
Paramecium tetraurelia
WBGene00000783
Caenorhabditis elegans
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (8 genes)
Thalassiosira oceanica (6 genes)
Pseudo-nitzschia multiseries (8 genes)
Fistulifera solaris (9 genes)
Fragilariopsis cylindrus (10 genes)
Cyclotella cryptica (7 genes)
Aureococcus anophagefferens (32 genes)
Ectocarpus siliculosus (6 genes)
Nannochloropsis gaditana (8 genes)
Homo sapiens (13 genes)
Drosophila melanogaster (12 genes)
Caenorhabditis elegans (27 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (33 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (9 genes)
Paramecium tetraurelia (58 genes)
Seminavis robusta (9 genes)
Synedra acus (4 genes)
Physcomitrella patens (11 genes)
Chlamydomonas reinhardtii (8 genes)
Pseudo-nitzschia multistriata (5 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
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