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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tps69300
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tps69300
Thalassiosira pseudonana
0.0e+00
1693.3
803
100.0
tps232400
Thalassiosira pseudonana
8.5e-173
609.0
292
99.3
tps222350
Thalassiosira pseudonana
3.1e-82
308.1
294
51.7
Sro218_g090170
Seminavis robusta
1.3e-72
276.2
306
47.7
tps234210
Thalassiosira pseudonana
1.0e-53
213.4
298
40.9
tho68000
Thalassiosira oceanica
2.4e-50
202.2
300
37.7
tho376700
Thalassiosira oceanica
6.6e-48
194.1
299
39.1
tps232920
Thalassiosira pseudonana
2.2e-43
179.1
269
39.4
Sro1843_g301180
Seminavis robusta
3.7e-43
178.3
304
35.5
Sro1843_g301190
Seminavis robusta
4.3e-39
164.9
306
33.3
CC00G104400
Cyclotella cryptica
2.1e-38
162.5
186
46.8
Sro202_g085470
Seminavis robusta
7.5e-36
154.1
323
32.2
Sro158_g071500
Seminavis robusta
1.3e-35
153.3
187
43.3
CC00G201810
Cyclotella cryptica
1.9e-34
149.4
213
40.4
CC00G80790
Cyclotella cryptica
8.6e-32
140.6
172
45.3
fso140140
Fistulifera solaris
9.5e-31
137.1
236
33.1
Sro3_g001980
Seminavis robusta
4.0e-29
131.7
365
29.3
fso129830
Fistulifera solaris
1.2e-28
130.2
236
31.4
CC00G164620
Cyclotella cryptica
4.4e-28
128.3
178
42.1
CC00G183760
Cyclotella cryptica
5.8e-28
127.9
176
42.0
tps210380
Thalassiosira pseudonana
2.1e-22
109.4
166
41.0
CC00G172930
Cyclotella cryptica
7.8e-17
90.9
168
37.5
tps144630
Thalassiosira pseudonana
1.0e-16
90.5
179
29.6
tps07970
Thalassiosira pseudonana
1.1e-15
87.0
154
35.7
tps229910
Thalassiosira pseudonana
1.5e-15
86.7
113
35.4
CC00G196550
Cyclotella cryptica
2.5e-15
85.9
102
46.1
tps224710
Thalassiosira pseudonana
4.3e-15
85.1
105
38.1
CC00G120640
Cyclotella cryptica
1.4e-13
80.1
120
35.0
CC00G145230
Cyclotella cryptica
1.4e-13
80.1
120
35.0
CC00G164880
Cyclotella cryptica
1.4e-13
80.1
120
35.0
CC00G68190
Cyclotella cryptica
3.1e-13
79.0
120
35.8
CC00G175620
Cyclotella cryptica
3.1e-13
79.0
120
35.8
CC00G107060
Cyclotella cryptica
6.9e-13
77.8
111
34.2
CC00G139460
Cyclotella cryptica
6.9e-13
77.8
120
35.0
tps26590
Thalassiosira pseudonana
6.9e-13
77.8
114
34.2
tho334200
Thalassiosira oceanica
3.4e-12
75.5
99
36.4
tho161760
Thalassiosira oceanica
7.6e-12
74.3
99
35.4
tho266040
Thalassiosira oceanica
7.6e-12
74.3
99
35.4
tps202030
Thalassiosira pseudonana
2.2e-11
72.8
103
33.0
CC00G37310
Cyclotella cryptica
2.9e-11
72.4
121
31.4
tho46380
Thalassiosira oceanica
3.8e-11
72.0
99
35.4
tps162090
Thalassiosira pseudonana
8.4e-11
70.9
122
30.3
tps224150
Thalassiosira pseudonana
8.4e-11
70.9
122
30.3
tho309080
Thalassiosira oceanica
1.4e-10
70.1
115
30.4
Sro10_g008340
Seminavis robusta
4.2e-10
68.6
184
31.0
tps84250
Thalassiosira pseudonana
5.4e-10
68.2
102
32.4
CC00G71360
Cyclotella cryptica
7.1e-10
67.8
89
43.8
tps205730
Thalassiosira pseudonana
7.1e-10
67.8
120
31.7
tho194660
Thalassiosira oceanica
3.0e-08
62.4
117
29.9
tps45710
Thalassiosira pseudonana
3.0e-08
62.4
100
29.0
tps231720
Thalassiosira pseudonana
3.0e-08
62.4
100
29.0
CC00G68290
Cyclotella cryptica
3.9e-08
62.0
99
29.3
tps219410
Thalassiosira pseudonana
1.9e-07
59.7
106
28.3
tho47200
Thalassiosira oceanica
4.8e-06
55.1
90
27.8
tho97520
Thalassiosira oceanica
8.1e-06
54.3
118
28.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (19 genes)
Thalassiosira oceanica (10 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (17 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (7 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing