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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tps193950
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tps193950
Thalassiosira pseudonana
1.8e-147
523.1
240
100.0
CC00G122160
Cyclotella cryptica
5.2e-118
425.2
215
90.2
Sro70_g039030
Seminavis robusta
2.9e-108
392.9
270
67.8
tps142420
Thalassiosira pseudonana
1.6e-106
387.1
240
74.2
ptri72160
Phaeodactylum tricornutum
4.6e-106
385.6
270
66.7
sya00G196410
Synedra acus
1.7e-105
383.6
272
65.1
gene18213
Fragilariopsis cylindrus
8.7e-105
381.3
273
63.7
fso199510
Fistulifera solaris
3.3e-104
379.4
278
65.1
fso73640
Fistulifera solaris
5.6e-104
378.6
278
65.1
ps00G65070
Pseudo-nitzschia multiseries
3.6e-103
375.9
279
63.4
ptri69840
Phaeodactylum tricornutum
1.3e-100
367.5
285
61.4
CC00G149660
Cyclotella cryptica
6.4e-100
365.2
299
59.5
fso43770
Fistulifera solaris
2.4e-99
363.2
274
63.5
fso64760
Fistulifera solaris
2.4e-99
363.2
274
63.5
Sro695_g188680
Seminavis robusta
1.3e-92
340.9
248
67.3
sya00G161050
Synedra acus
4.5e-85
315.8
240
56.2
fso77050
Fistulifera solaris
7.1e-83
308.5
242
58.3
fso191720
Fistulifera solaris
9.3e-83
308.1
242
58.3
Sro968_g226070
Seminavis robusta
1.2e-82
307.8
240
55.0
Sro99_g050950
Seminavis robusta
1.6e-82
307.4
240
54.2
ps00G33510
Pseudo-nitzschia multiseries
2.1e-82
307.0
240
54.2
fso77080
Fistulifera solaris
2.7e-82
306.6
240
54.6
ptri130290
Phaeodactylum tricornutum
1.3e-81
304.3
240
52.5
gene16313
Fragilariopsis cylindrus
3.0e-81
303.1
240
52.9
fso160310
Fistulifera solaris
2.8e-79
296.6
240
53.3
tps130000
Thalassiosira pseudonana
2.0e-77
290.4
245
51.8
tho217020
Thalassiosira oceanica
1.4e-75
284.3
239
53.6
sya00G00440
Synedra acus
1.3e-63
244.6
162
64.2
CC00G69060
Cyclotella cryptica
1.0e-44
181.8
152
50.7
Sro9_g007140
Seminavis robusta
1.2e-42
174.9
141
53.9
ENSG00000163743
Homo sapiens
1.8e-41
171.0
227
36.1
FBgn0031816
Drosophila melanogaster
8.8e-41
168.7
240
37.1
tho328140
Thalassiosira oceanica
2.8e-39
163.7
274
35.4
Cre05.g248550
Chlamydomonas reinhardtii
8.3e-39
162.2
244
39.3
CM13G01410
Cyanidioschyzon merolae
1.1e-38
161.8
243
40.3
AT1G74770
Arabidopsis thaliana
3.2e-35
150.2
240
33.8
AT1G18910
Arabidopsis thaliana
2.1e-34
147.5
240
35.8
AT3G62970
Arabidopsis thaliana
5.2e-33
142.9
244
35.7
SPAC2F3.16
Schizosaccharomyces pombe
1.5e-32
141.4
243
35.0
Cre17.g718300
Chlamydomonas reinhardtii
9.8e-32
138.7
246
36.2
sya00G162130
Synedra acus
1.3e-31
138.3
249
33.3
Ec-26_004520
Ectocarpus siliculosus
6.3e-31
136.0
263
34.6
CC00G86210
Cyclotella cryptica
1.1e-30
135.2
248
30.6
AT3G18290
Arabidopsis thaliana
4.1e-30
133.3
244
33.2
fso155640
Fistulifera solaris
5.4e-30
132.9
251
31.1
Pp3c11_6970
Physcomitrella patens
5.4e-30
132.9
246
35.0
ccr65580
Chondrus crispus
7.0e-30
132.5
246
31.3
ps00G05920
Pseudo-nitzschia multiseries
1.6e-29
131.3
251
34.3
gsu76240
Galdieria sulphuraria
2.0e-29
131.0
248
33.5
tps146910
Thalassiosira pseudonana
7.7e-29
129.0
209
33.0
ccr161060
Chondrus crispus
1.0e-28
128.6
250
32.8
Naga_100090g9
Nannochloropsis gaditana
1.0e-28
128.6
246
31.3
Pp3c14_5600
Physcomitrella patens
1.0e-28
128.6
245
34.7
Pp3c10_4820
Physcomitrella patens
1.0e-28
128.6
245
33.9
Pp3c25_14501
Physcomitrella patens
2.9e-28
127.1
241
34.9
Pp3c25_14500
Physcomitrella patens
2.9e-28
127.1
241
34.9
Pp3c6_1960
Physcomitrella patens
5.0e-28
126.3
243
35.4
Pp3c2_31820
Physcomitrella patens
3.3e-27
123.6
246
34.6
Pp3c1_6070
Physcomitrella patens
8.0e-26
119.0
246
34.1
AT5G25560
Arabidopsis thaliana
3.4e-24
113.6
207
36.2
fso150310
Fistulifera solaris
1.4e-22
108.2
190
31.6
tho87860
Thalassiosira oceanica
3.2e-22
107.1
210
32.9
pte443830
Paramecium tetraurelia
2.7e-21
104.0
247
32.4
pte760660
Paramecium tetraurelia
2.7e-21
104.0
252
32.5
gene11141
Fragilariopsis cylindrus
4.7e-18
93.2
174
35.6
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
8.9e-17
89.0
53
62.3
CC00G85450
Cyclotella cryptica
6.2e-10
66.2
27
92.6
Sro9_g007130
Seminavis robusta
3.7e-07
57.0
27
70.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (6 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing