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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tps170710
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tps170710
Thalassiosira pseudonana
2.1e-172
606.3
300
100.0
CC00G113840
Cyclotella cryptica
9.5e-101
368.2
298
61.7
Sro1228_g254370
Seminavis robusta
3.0e-38
160.6
303
32.0
tho196600
Thalassiosira oceanica
1.7e-33
144.8
307
32.9
fso33230
Fistulifera solaris
5.5e-32
139.8
297
30.3
CC00G57010
Cyclotella cryptica
9.4e-32
139.0
272
34.2
ptri229170
Phaeodactylum tricornutum
9.4e-32
139.0
301
32.6
tps71590
Thalassiosira pseudonana
3.6e-31
137.1
245
36.3
ptri223580
Phaeodactylum tricornutum
3.3e-29
130.6
265
31.3
tho20540
Thalassiosira oceanica
2.4e-27
124.4
234
33.3
ps00G155910
Pseudo-nitzschia multiseries
3.1e-27
124.0
238
33.2
PSNMU-V1.4_AUG-EV-PASAV3_0030110
Pseudo-nitzschia multistriata
1.2e-26
122.1
257
31.9
gene6749
Fragilariopsis cylindrus
1.5e-26
121.7
242
32.2
Sro506_g156280
Seminavis robusta
2.6e-26
120.9
225
32.0
tho132960
Thalassiosira oceanica
3.4e-26
120.6
221
34.8
sya00G43360
Synedra acus
1.7e-25
118.2
312
29.2
ptri226930
Phaeodactylum tricornutum
2.2e-25
117.9
238
31.5
ps00G01920
Pseudo-nitzschia multiseries
3.8e-25
117.1
257
31.5
tps38520
Thalassiosira pseudonana
3.8e-25
117.1
257
27.2
ps00G168960
Pseudo-nitzschia multiseries
5.0e-25
116.7
281
31.0
sya00G12100
Synedra acus
6.5e-25
116.3
311
28.3
tho194020
Thalassiosira oceanica
1.1e-24
115.5
258
27.9
CC00G136890
Cyclotella cryptica
1.9e-24
114.8
259
30.1
Sro1353_g265400
Seminavis robusta
1.9e-24
114.8
265
28.7
CC00G196020
Cyclotella cryptica
3.2e-24
114.0
257
26.8
gene9793
Fragilariopsis cylindrus
3.2e-24
114.0
170
37.6
fso54280
Fistulifera solaris
4.2e-24
113.6
222
31.1
fso123550
Fistulifera solaris
4.2e-24
113.6
222
31.5
sya00G53380
Synedra acus
5.5e-24
113.2
246
32.1
tho592300
Thalassiosira oceanica
5.5e-24
113.2
179
35.8
ps00G174510
Pseudo-nitzschia multiseries
7.2e-24
112.8
250
32.0
gene6405
Fragilariopsis cylindrus
9.4e-24
112.5
252
32.1
sya00G52670
Synedra acus
1.2e-23
112.1
233
33.9
ptri211550
Phaeodactylum tricornutum
1.6e-23
111.7
231
32.5
PSNMU-V1.4_AUG-EV-PASAV3_0095090
Pseudo-nitzschia multistriata
2.7e-23
110.9
250
31.6
CC00G26170
Cyclotella cryptica
4.7e-23
110.2
224
32.6
Sro1512_g278790
Seminavis robusta
4.7e-23
110.2
219
33.8
gene14534
Fragilariopsis cylindrus
6.1e-23
109.8
247
31.2
gene516
Fragilariopsis cylindrus
6.1e-23
109.8
247
31.2
Sro748_g196620
Seminavis robusta
6.1e-23
109.8
258
30.6
sya00G17600
Synedra acus
7.9e-23
109.4
230
30.4
sya00G242440
Synedra acus
1.0e-22
109.0
180
35.6
tps150290
Thalassiosira pseudonana
2.3e-22
107.8
165
37.0
fso113910
Fistulifera solaris
3.0e-22
107.5
257
32.3
sya00G242400
Synedra acus
3.0e-22
107.5
164
33.5
CC00G125810
Cyclotella cryptica
3.9e-22
107.1
171
35.7
fso39760
Fistulifera solaris
3.9e-22
107.1
161
38.5
ptri21090
Phaeodactylum tricornutum
3.9e-22
107.1
223
33.2
fso11540
Fistulifera solaris
5.1e-22
106.7
257
31.9
tps209500
Thalassiosira pseudonana
5.1e-22
106.7
223
31.4
tps126430
Thalassiosira pseudonana
1.1e-21
105.5
313
27.2
fso109690
Fistulifera solaris
1.5e-21
105.1
162
38.9
PSNMU-V1.4_AUG-EV-PASAV3_0074230
Pseudo-nitzschia multistriata
2.0e-21
104.8
286
28.3
fso90480
Fistulifera solaris
2.6e-21
104.4
192
32.8
tho314880
Thalassiosira oceanica
2.6e-21
104.4
227
29.5
sya00G230590
Synedra acus
3.3e-21
104.0
203
32.5
Sro776_g200900
Seminavis robusta
4.4e-21
103.6
279
26.5
tps32140
Thalassiosira pseudonana
4.4e-21
103.6
310
28.4
ptri223660
Phaeodactylum tricornutum
5.7e-21
103.2
223
30.5
Sro560_g166640
Seminavis robusta
9.7e-21
102.4
235
31.9
fso151960
Fistulifera solaris
1.7e-20
101.7
275
29.8
Sro458_g147090
Seminavis robusta
1.7e-20
101.7
170
35.9
Sro776_g200870
Seminavis robusta
1.7e-20
101.7
231
30.7
fso62790
Fistulifera solaris
2.2e-20
101.3
213
31.9
Sro975_g226830
Seminavis robusta
2.8e-20
100.9
167
35.9
sya00G205170
Synedra acus
2.8e-20
100.9
181
33.7
fso98040
Fistulifera solaris
3.7e-20
100.5
170
34.7
fso125600
Fistulifera solaris
4.8e-20
100.1
192
32.3
tps64720
Thalassiosira pseudonana
4.8e-20
100.1
263
29.7
fso168420
Fistulifera solaris
8.2e-20
99.4
274
29.6
Sro718_g192230
Seminavis robusta
8.2e-20
99.4
221
30.3
tps170450
Thalassiosira pseudonana
1.1e-19
99.0
218
31.7
CC00G172280
Cyclotella cryptica
1.4e-19
98.6
212
30.2
ptri32460
Phaeodactylum tricornutum
1.4e-19
98.6
226
29.6
fso123570
Fistulifera solaris
2.4e-19
97.8
222
32.0
Sro107_g054050
Seminavis robusta
2.4e-19
97.8
221
31.2
CC00G198070
Cyclotella cryptica
4.1e-19
97.1
165
34.5
fso08560
Fistulifera solaris
4.1e-19
97.1
220
30.9
fso54300
Fistulifera solaris
4.1e-19
97.1
222
32.0
Sro299_g111340
Seminavis robusta
4.1e-19
97.1
167
32.3
fso89100
Fistulifera solaris
5.3e-19
96.7
219
29.7
tps64700
Thalassiosira pseudonana
5.3e-19
96.7
232
29.3
ps00G192350
Pseudo-nitzschia multiseries
7.0e-19
96.3
234
29.9
Sro176_g077270
Seminavis robusta
7.0e-19
96.3
209
28.7
gene16545
Fragilariopsis cylindrus
1.5e-18
95.1
212
29.2
ptri228830
Phaeodactylum tricornutum
2.0e-18
94.7
254
28.7
Sro756_g197840
Seminavis robusta
2.0e-18
94.7
168
29.8
CC00G13180
Cyclotella cryptica
2.6e-18
94.4
169
34.3
ptri10280
Phaeodactylum tricornutum
4.5e-18
93.6
234
27.8
gene13799
Fragilariopsis cylindrus
7.7e-18
92.8
189
33.9
CC00G139230
Cyclotella cryptica
1.0e-17
92.4
270
25.9
AA0017G01530
Aureococcus anophagefferens
3.8e-17
90.5
204
28.9
Sro3210_g345280
Seminavis robusta
3.8e-17
90.5
167
32.3
Sro299_g111270
Seminavis robusta
3.8e-17
90.5
167
32.3
ps00G135050
Pseudo-nitzschia multiseries
5.0e-17
90.1
245
29.0
Sro1294_g260200
Seminavis robusta
5.0e-17
90.1
242
28.1
tho332820
Thalassiosira oceanica
5.0e-17
90.1
312
26.9
tps64680
Thalassiosira pseudonana
5.0e-17
90.1
209
31.6
Sro555_g165810
Seminavis robusta
6.5e-17
89.7
229
28.8
CC00G124300
Cyclotella cryptica
8.5e-17
89.4
231
31.2
gene16432
Fragilariopsis cylindrus
1.1e-16
89.0
168
32.1
sya00G156000
Synedra acus
1.1e-16
89.0
260
28.5
ps00G185300
Pseudo-nitzschia multiseries
1.4e-16
88.6
207
30.4
Sro672_g185130
Seminavis robusta
1.4e-16
88.6
202
29.7
Sro245_g097390
Seminavis robusta
1.4e-16
88.6
222
28.8
PSNMU-V1.4_AUG-EV-PASAV3_0081540
Pseudo-nitzschia multistriata
1.9e-16
88.2
168
32.1
Sro299_g111510
Seminavis robusta
1.9e-16
88.2
210
29.0
tps192360
Thalassiosira pseudonana
1.9e-16
88.2
204
27.5
Sro2349_g324350
Seminavis robusta
3.2e-16
87.4
193
32.6
Sro374_g129180
Seminavis robusta
5.5e-16
86.7
180
31.7
tps105880
Thalassiosira pseudonana
5.5e-16
86.7
233
29.2
ps00G49760
Pseudo-nitzschia multiseries
7.2e-16
86.3
208
29.8
Sro427_g140660
Seminavis robusta
7.2e-16
86.3
169
34.3
tho224000
Thalassiosira oceanica
7.2e-16
86.3
269
29.7
fso180330
Fistulifera solaris
9.4e-16
85.9
205
30.7
ps00G78480
Pseudo-nitzschia multiseries
9.4e-16
85.9
172
31.4
PSNMU-V1.4_AUG-EV-PASAV3_0005510
Pseudo-nitzschia multistriata
2.1e-15
84.7
211
29.4
Sro1015_g231520
Seminavis robusta
2.1e-15
84.7
226
30.1
Sro299_g111520
Seminavis robusta
2.1e-15
84.7
220
26.4
fso184000
Fistulifera solaris
2.7e-15
84.3
137
34.3
CC00G175600
Cyclotella cryptica
3.6e-15
84.0
227
30.0
sya00G256570
Synedra acus
6.1e-15
83.2
146
32.2
sya00G264280
Synedra acus
6.1e-15
83.2
160
30.6
tps211660
Thalassiosira pseudonana
6.1e-15
83.2
113
35.4
fso179420
Fistulifera solaris
8.0e-15
82.8
137
33.6
fso184930
Fistulifera solaris
8.0e-15
82.8
262
27.5
ptri158990
Phaeodactylum tricornutum
8.0e-15
82.8
205
25.9
sya00G25330
Synedra acus
1.0e-14
82.4
113
35.4
sya00G117100
Synedra acus
1.0e-14
82.4
144
31.9
sya00G204800
Synedra acus
1.0e-14
82.4
211
25.1
ptri21940
Phaeodactylum tricornutum
1.4e-14
82.0
200
27.0
tps97340
Thalassiosira pseudonana
1.4e-14
82.0
222
28.4
fso15630
Fistulifera solaris
1.8e-14
81.6
202
29.7
fso143640
Fistulifera solaris
3.0e-14
80.9
202
29.2
ps00G113470
Pseudo-nitzschia multiseries
3.0e-14
80.9
165
30.9
Sro844_g209850
Seminavis robusta
3.9e-14
80.5
221
28.1
Sro57_g033130
Seminavis robusta
3.9e-14
80.5
221
28.1
tps118120
Thalassiosira pseudonana
3.9e-14
80.5
217
27.2
fso181370
Fistulifera solaris
5.2e-14
80.1
168
32.7
tps120810
Thalassiosira pseudonana
5.2e-14
80.1
166
30.7
Sro299_g111490
Seminavis robusta
8.8e-14
79.3
173
28.9
CC00G47830
Cyclotella cryptica
1.1e-13
79.0
121
35.5
CC00G64720
Cyclotella cryptica
1.1e-13
79.0
179
30.2
CC00G79300
Cyclotella cryptica
1.1e-13
79.0
121
35.5
fso182460
Fistulifera solaris
1.1e-13
79.0
168
32.1
gene3187
Fragilariopsis cylindrus
2.0e-13
78.2
129
33.3
PSNMU-V1.4_AUG-EV-PASAV3_0066060
Pseudo-nitzschia multistriata
2.6e-13
77.8
218
27.1
fso184970
Fistulifera solaris
3.3e-13
77.4
251
26.3
AA0008G00810
Aureococcus anophagefferens
4.4e-13
77.0
261
26.4
fso180370
Fistulifera solaris
4.4e-13
77.0
202
27.2
gene17789
Fragilariopsis cylindrus
5.7e-13
76.6
169
28.4
ps00G96090
Pseudo-nitzschia multiseries
7.4e-13
76.3
221
28.1
gene7436
Fragilariopsis cylindrus
9.7e-13
75.9
115
33.9
CC00G122630
Cyclotella cryptica
1.3e-12
75.5
234
30.8
CC00G152580
Cyclotella cryptica
1.7e-12
75.1
225
27.6
tps31050
Thalassiosira pseudonana
1.7e-12
75.1
228
24.6
CC00G134640
Cyclotella cryptica
2.2e-12
74.7
216
27.3
Sro299_g111360
Seminavis robusta
2.8e-12
74.3
198
27.8
CC00G127850
Cyclotella cryptica
3.7e-12
73.9
211
25.6
sya00G02940
Synedra acus
3.7e-12
73.9
172
27.3
tho222020
Thalassiosira oceanica
4.8e-12
73.6
221
25.3
tps144100
Thalassiosira pseudonana
6.3e-12
73.2
116
32.8
CC00G96200
Cyclotella cryptica
8.2e-12
72.8
116
31.0
tps31090
Thalassiosira pseudonana
8.2e-12
72.8
228
24.1
CC00G09230
Cyclotella cryptica
1.1e-11
72.4
167
31.1
gene5301
Fragilariopsis cylindrus
1.1e-11
72.4
111
36.0
Sro1087_g239840
Seminavis robusta
1.1e-11
72.4
171
29.2
tps105860
Thalassiosira pseudonana
1.1e-11
72.4
174
32.2
gene10828
Fragilariopsis cylindrus
1.4e-11
72.0
168
27.4
tho66420
Thalassiosira oceanica
1.4e-11
72.0
182
32.4
tho315300
Thalassiosira oceanica
3.1e-11
70.9
223
26.0
tps29450
Thalassiosira pseudonana
3.1e-11
70.9
223
24.7
CC00G32860
Cyclotella cryptica
4.1e-11
70.5
169
30.8
tho256100
Thalassiosira oceanica
5.3e-11
70.1
217
26.7
CC00G11640
Cyclotella cryptica
7.0e-11
69.7
216
25.9
tps29390
Thalassiosira pseudonana
7.0e-11
69.7
223
25.1
tho61040
Thalassiosira oceanica
9.1e-11
69.3
220
26.8
tho170540
Thalassiosira oceanica
9.1e-11
69.3
219
26.0
tps45290
Thalassiosira pseudonana
9.1e-11
69.3
211
25.1
tps29430
Thalassiosira pseudonana
1.6e-10
68.6
172
29.1
fso139480
Fistulifera solaris
2.0e-10
68.2
200
27.5
fso193460
Fistulifera solaris
2.0e-10
68.2
190
26.8
tho377180
Thalassiosira oceanica
2.0e-10
68.2
219
25.6
ps00G83920
Pseudo-nitzschia multiseries
3.5e-10
67.4
228
27.6
tps225440
Thalassiosira pseudonana
3.5e-10
67.4
159
28.9
sya00G128810
Synedra acus
5.9e-10
66.6
172
27.9
tps29530
Thalassiosira pseudonana
5.9e-10
66.6
170
27.1
tps95720
Thalassiosira pseudonana
7.7e-10
66.2
170
25.3
CC00G154580
Cyclotella cryptica
1.3e-09
65.5
170
25.3
fso195520
Fistulifera solaris
1.3e-09
65.5
200
27.0
tho138240
Thalassiosira oceanica
1.3e-09
65.5
219
25.1
CC00G168640
Cyclotella cryptica
1.7e-09
65.1
283
23.7
tps109520
Thalassiosira pseudonana
1.7e-09
65.1
257
24.9
gene11947
Fragilariopsis cylindrus
2.2e-09
64.7
113
28.3
tho102120
Thalassiosira oceanica
2.2e-09
64.7
188
23.9
tho435300
Thalassiosira oceanica
2.2e-09
64.7
151
28.5
fso59730
Fistulifera solaris
2.9e-09
64.3
185
26.5
AA0009G02010
Aureococcus anophagefferens
8.5e-09
62.8
159
28.9
ENSG00000175305
Homo sapiens
1.9e-08
61.6
112
31.2
sya00G242410
Synedra acus
1.9e-08
61.6
140
29.3
tho110160
Thalassiosira oceanica
2.5e-08
61.2
236
25.4
tho270080
Thalassiosira oceanica
2.5e-08
61.2
181
23.8
CC00G51700
Cyclotella cryptica
4.2e-08
60.5
157
28.7
FBgn0010315
Drosophila melanogaster
4.2e-08
60.5
116
31.0
WBGene00000871
Caenorhabditis elegans
5.5e-08
60.1
126
31.7
FBgn0010382
Drosophila melanogaster
5.5e-08
60.1
112
30.4
CC00G13870
Cyclotella cryptica
9.4e-08
59.3
286
23.8
fso140540
Fistulifera solaris
1.2e-07
58.9
167
25.7
tps216790
Thalassiosira pseudonana
1.2e-07
58.9
172
27.3
tps102120
Thalassiosira pseudonana
1.6e-07
58.5
215
22.8
fso174540
Fistulifera solaris
2.1e-07
58.2
223
23.3
tps204250
Thalassiosira pseudonana
2.1e-07
58.2
151
28.5
CC00G27720
Cyclotella cryptica
3.6e-07
57.4
179
24.6
Sro299_g111470
Seminavis robusta
8.0e-07
56.2
177
23.7
tps106360
Thalassiosira pseudonana
8.0e-07
56.2
113
30.1
Sro781_g201590
Seminavis robusta
1.4e-06
55.5
159
26.4
Sro1087_g239830
Seminavis robusta
1.4e-06
55.5
144
24.3
Sro2092_g314100
Seminavis robusta
1.4e-06
55.5
97
35.1
pte620060
Paramecium tetraurelia
1.8e-06
55.1
216
26.9
ENSG00000105173
Homo sapiens
2.3e-06
54.7
126
27.8
tps225460
Thalassiosira pseudonana
2.3e-06
54.7
215
20.9
AT1G47220
Arabidopsis thaliana
3.0e-06
54.3
108
30.6
CC00G26970
Cyclotella cryptica
3.0e-06
54.3
232
25.0
CC00G21330
Cyclotella cryptica
4.0e-06
53.9
180
25.6
Pp3c14_23640
Physcomitrella patens
5.2e-06
53.5
195
27.2
ptri64980
Phaeodactylum tricornutum
5.2e-06
53.5
252
23.4
Pp3c17_22710
Physcomitrella patens
6.8e-06
53.1
196
26.0
tps217010
Thalassiosira pseudonana
8.8e-06
52.8
72
37.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (12 genes)
Thalassiosira pseudonana (35 genes)
Thalassiosira oceanica (20 genes)
Pseudo-nitzschia multiseries (12 genes)
Fistulifera solaris (33 genes)
Fragilariopsis cylindrus (14 genes)
Cyclotella cryptica (30 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (36 genes)
Synedra acus (18 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (6 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing