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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tps135390
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tps135390
Thalassiosira pseudonana
1.4e-34
146.4
72
100.0
CC00G115730
Cyclotella cryptica
2.0e-28
125.9
69
87.0
PSNMU-V1.4_AUG-EV-PASAV3_0089550
Pseudo-nitzschia multistriata
1.2e-25
116.7
69
81.2
ps00G153780
Pseudo-nitzschia multiseries
1.2e-25
116.7
69
81.2
sya00G182630
Synedra acus
1.6e-25
116.3
69
81.2
Sro569_g168310
Seminavis robusta
3.5e-25
115.2
69
81.2
ptri132030
Phaeodactylum tricornutum
7.7e-25
114.0
69
79.7
gene399
Fragilariopsis cylindrus
2.3e-24
112.5
69
79.7
CC00G84330
Cyclotella cryptica
8.6e-24
110.5
72
73.6
CC00G166550
Cyclotella cryptica
8.6e-24
110.5
72
73.6
fso43260
Fistulifera solaris
2.5e-23
109.0
69
75.4
fso191500
Fistulifera solaris
2.5e-23
109.0
69
75.4
fso191490
Fistulifera solaris
4.2e-23
108.2
72
73.6
tho25240
Thalassiosira oceanica
2.1e-22
105.9
70
68.6
tps77940
Thalassiosira pseudonana
2.1e-22
105.9
69
69.6
fso43250
Fistulifera solaris
3.6e-22
105.1
69
72.5
CC00G68810
Cyclotella cryptica
1.0e-21
103.6
69
68.1
Naga_100083g7
Nannochloropsis gaditana
2.6e-20
99.0
69
69.6
Sro663_g183500
Seminavis robusta
5.7e-20
97.8
68
70.6
CC00G68690
Cyclotella cryptica
4.5e-17
88.2
68
64.7
AA0003G00080
Aureococcus anophagefferens
2.3e-16
85.9
68
55.9
AA1410G00010
Aureococcus anophagefferens
2.3e-16
85.9
68
55.9
AA0011G02040
Aureococcus anophagefferens
5.0e-16
84.7
67
55.2
Cre16.g675637
Chlamydomonas reinhardtii
5.6e-15
81.3
69
50.7
Cre16.g675749
Chlamydomonas reinhardtii
1.2e-14
80.1
69
49.3
tho570160
Thalassiosira oceanica
2.1e-14
79.3
68
60.3
Ec-27_001840
Ectocarpus siliculosus
4.7e-14
78.2
69
52.2
AT4G26840
Arabidopsis thaliana
6.1e-14
77.8
70
51.4
SPBC365.06
Schizosaccharomyces pombe
1.0e-13
77.0
69
52.2
AT5G55160
Arabidopsis thaliana
3.0e-13
75.5
67
52.2
Sro16_g011900
Seminavis robusta
5.2e-13
74.7
69
55.1
AA0002G03330
Aureococcus anophagefferens
6.8e-13
74.3
62
53.2
Pp3c6_10360
Physcomitrella patens
2.6e-12
72.4
70
48.6
WBGene00004888
Caenorhabditis elegans
5.7e-12
71.2
69
50.7
tho340540
Thalassiosira oceanica
7.5e-12
70.9
73
54.8
Pp3c11_8940
Physcomitrella patens
1.7e-11
69.7
70
45.7
pte266010
Paramecium tetraurelia
1.7e-11
69.7
72
45.8
pte527500
Paramecium tetraurelia
1.7e-11
69.7
69
46.4
pte465000
Paramecium tetraurelia
2.2e-11
69.3
69
46.4
pte543030
Paramecium tetraurelia
2.2e-11
69.3
69
46.4
pte651690
Paramecium tetraurelia
2.2e-11
69.3
69
46.4
Cre16.g675861
Chlamydomonas reinhardtii
8.3e-11
67.4
69
44.9
emh123620
Emiliania huxleyi
1.1e-10
67.0
69
49.3
CM05G00040
Cyanidioschyzon merolae
1.4e-10
66.6
67
50.7
gene14411
Fragilariopsis cylindrus
2.4e-10
65.9
68
51.5
YDR510W
Saccharomyces cerevisiae strain S288C
5.4e-10
64.7
66
45.5
gsu120520
Galdieria sulphuraria
9.2e-10
63.9
68
42.6
ENSG00000188612
Homo sapiens
9.2e-10
63.9
72
45.8
emh685980
Emiliania huxleyi
1.2e-09
63.5
68
44.1
AA1344G00010
Aureococcus anophagefferens
2.7e-09
62.4
66
45.5
tps77400
Thalassiosira pseudonana
3.5e-09
62.0
59
52.5
emh334950
Emiliania huxleyi
7.8e-09
60.8
69
43.5
emh169370
Emiliania huxleyi
7.8e-09
60.8
69
43.5
AT5G55856
Arabidopsis thaliana
1.0e-08
60.5
63
42.9
AA0061G00010
Aureococcus anophagefferens
1.3e-08
60.1
65
44.6
ENSG00000177688
Homo sapiens
5.0e-08
58.2
72
41.7
ps00G193000
Pseudo-nitzschia multiseries
6.6e-08
57.8
65
38.5
Cre17.g716301
Chlamydomonas reinhardtii
1.1e-07
57.0
80
40.0
gene20550
Fragilariopsis cylindrus
2.5e-07
55.8
65
36.9
AT5G55170
Arabidopsis thaliana
3.3e-07
55.5
69
37.7
emh597500
Emiliania huxleyi
3.3e-07
55.5
72
38.9
emh527020
Emiliania huxleyi
3.3e-07
55.5
72
38.9
emh694030
Emiliania huxleyi
5.6e-07
54.7
72
38.9
Sro22_g015430
Seminavis robusta
9.5e-07
53.9
60
40.0
Cre16.g662550
Chlamydomonas reinhardtii
1.6e-06
53.1
55
47.3
FBgn0264922
Drosophila melanogaster
1.6e-06
53.1
63
39.7
ptri76320
Phaeodactylum tricornutum
1.6e-06
53.1
65
35.4
emh467600
Emiliania huxleyi
2.8e-06
52.4
66
39.4
AT5G48710
Arabidopsis thaliana
3.6e-06
52.0
68
41.2
fso39530
Fistulifera solaris
6.2e-06
51.2
60
36.7
fso109460
Fistulifera solaris
6.2e-06
51.2
60
36.7
emh467620
Emiliania huxleyi
8.0e-06
50.8
60
40.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (3 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (6 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (9 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (4 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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