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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tps130000
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tps130000
Thalassiosira pseudonana
1.0e-156
553.9
246
100.0
sya00G161050
Synedra acus
4.9e-111
402.1
247
72.1
ps00G33510
Pseudo-nitzschia multiseries
2.7e-109
396.4
245
71.8
fso77080
Fistulifera solaris
2.3e-108
393.3
246
69.5
Sro99_g050950
Seminavis robusta
8.6e-108
391.3
242
71.5
Sro968_g226070
Seminavis robusta
1.2e-106
387.5
242
71.5
gene16313
Fragilariopsis cylindrus
1.6e-106
387.1
241
70.1
ptri130290
Phaeodactylum tricornutum
1.0e-105
384.4
246
68.7
fso77050
Fistulifera solaris
1.8e-105
383.6
247
68.0
fso191720
Fistulifera solaris
2.3e-105
383.3
247
68.0
fso160310
Fistulifera solaris
2.6e-104
379.8
246
68.3
tho217020
Thalassiosira oceanica
2.7e-101
369.8
246
67.9
tps142420
Thalassiosira pseudonana
7.3e-83
308.5
240
54.2
fso199510
Fistulifera solaris
1.7e-76
287.3
279
46.6
sya00G196410
Synedra acus
2.3e-76
287.0
273
47.3
ptri72160
Phaeodactylum tricornutum
3.9e-76
286.2
271
48.0
tps193950
Thalassiosira pseudonana
3.9e-76
286.2
245
51.8
Sro70_g039030
Seminavis robusta
6.6e-76
285.4
277
47.3
CC00G69060
Cyclotella cryptica
4.3e-75
282.7
150
80.0
CC00G149660
Cyclotella cryptica
4.3e-75
282.7
300
43.3
fso73640
Fistulifera solaris
2.1e-74
280.4
279
45.2
ps00G65070
Pseudo-nitzschia multiseries
6.2e-74
278.9
280
47.1
ptri69840
Phaeodactylum tricornutum
6.9e-73
275.4
292
42.1
gene18213
Fragilariopsis cylindrus
1.4e-70
267.7
274
44.9
fso64760
Fistulifera solaris
4.2e-70
266.2
275
45.8
fso43770
Fistulifera solaris
9.3e-70
265.0
275
45.5
Sro695_g188680
Seminavis robusta
9.3e-70
265.0
249
48.2
CC00G122160
Cyclotella cryptica
7.6e-64
245.4
206
51.9
sya00G00440
Synedra acus
3.9e-52
206.5
163
52.8
FBgn0031816
Drosophila melanogaster
9.3e-46
185.3
241
38.2
CM13G01410
Cyanidioschyzon merolae
5.1e-44
179.5
246
39.8
ENSG00000163743
Homo sapiens
7.4e-43
175.6
228
36.0
Sro9_g007140
Seminavis robusta
1.8e-41
171.0
138
52.2
sya00G162130
Synedra acus
2.2e-39
164.1
254
35.8
CC00G86210
Cyclotella cryptica
3.8e-39
163.3
255
35.3
Cre05.g248550
Chlamydomonas reinhardtii
1.9e-38
161.0
247
35.2
fso155640
Fistulifera solaris
2.5e-38
160.6
255
34.1
ccr65580
Chondrus crispus
2.1e-37
157.5
248
34.3
Naga_100090g9
Nannochloropsis gaditana
1.8e-36
154.5
246
35.0
Cre17.g718300
Chlamydomonas reinhardtii
5.1e-36
152.9
250
34.8
tho328140
Thalassiosira oceanica
9.7e-35
148.7
207
37.7
AT3G18290
Arabidopsis thaliana
1.7e-34
147.9
253
33.6
ccr36960
Chondrus crispus
4.8e-34
146.4
248
33.1
tps146910
Thalassiosira pseudonana
1.1e-33
145.2
214
37.4
AT3G62970
Arabidopsis thaliana
1.4e-33
144.8
246
33.3
AT1G74770
Arabidopsis thaliana
6.9e-33
142.5
245
32.7
SPAC2F3.16
Schizosaccharomyces pombe
6.9e-33
142.5
251
31.9
ps00G05920
Pseudo-nitzschia multiseries
1.3e-31
138.3
256
30.9
Ec-26_004520
Ectocarpus siliculosus
3.8e-31
136.7
268
31.3
fso150310
Fistulifera solaris
1.4e-30
134.8
191
33.5
Pp3c11_6970
Physcomitrella patens
1.4e-30
134.8
248
31.0
Pp3c25_14501
Physcomitrella patens
1.4e-30
134.8
250
31.6
Pp3c25_14500
Physcomitrella patens
1.4e-30
134.8
250
31.6
Pp3c10_4820
Physcomitrella patens
2.5e-30
134.0
247
30.0
Pp3c1_6070
Physcomitrella patens
9.4e-30
132.1
248
31.0
Pp3c14_5600
Physcomitrella patens
1.6e-29
131.3
247
29.6
Pp3c6_1960
Physcomitrella patens
1.6e-29
131.3
250
31.2
Pp3c2_31820
Physcomitrella patens
3.6e-29
130.2
248
31.5
AT5G18650
Arabidopsis thaliana
6.1e-29
129.4
247
30.0
AT5G22920
Arabidopsis thaliana
6.1e-29
129.4
248
29.4
AT1G18910
Arabidopsis thaliana
1.8e-28
127.9
244
30.7
gsu76240
Galdieria sulphuraria
1.8e-28
127.9
248
28.6
tho87860
Thalassiosira oceanica
3.3e-27
123.6
237
32.1
pte243060
Paramecium tetraurelia
1.4e-25
118.2
252
29.4
ccr161060
Chondrus crispus
9.1e-25
115.5
248
29.8
AT5G25560
Arabidopsis thaliana
1.2e-21
105.1
216
28.7
pte760660
Paramecium tetraurelia
5.2e-20
99.8
249
28.1
pte443830
Paramecium tetraurelia
7.4e-19
95.9
248
27.4
gene11141
Fragilariopsis cylindrus
1.8e-17
91.3
198
27.8
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
1.3e-15
85.1
61
55.7
Sro9_g007130
Seminavis robusta
2.2e-07
57.8
33
60.6
CC00G85450
Cyclotella cryptica
6.5e-07
56.2
32
59.4
SPBC17D11.02c
Schizosaccharomyces pombe
1.9e-06
54.7
154
25.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (6 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing