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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tps120590
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tps120590
Thalassiosira pseudonana
6.0e-109
394.8
191
100.0
CC00G201970
Cyclotella cryptica
1.3e-103
377.1
189
95.8
fso108990
Fistulifera solaris
1.2e-101
370.5
191
91.6
Sro2062_g313040
Seminavis robusta
3.5e-101
369.0
191
91.1
ptri127180
Phaeodactylum tricornutum
4.6e-101
368.6
191
90.6
fso86310
Fistulifera solaris
1.8e-100
366.7
191
91.1
Sro281_g107280
Seminavis robusta
2.3e-100
366.3
191
90.6
gene16872
Fragilariopsis cylindrus
1.1e-99
364.0
191
90.1
ps00G172810
Pseudo-nitzschia multiseries
1.1e-99
364.0
191
89.0
sya00G249320
Synedra acus
4.1e-57
222.6
164
68.9
sya00G106980
Synedra acus
1.2e-56
221.1
159
70.4
sya00G93400
Synedra acus
5.9e-56
218.8
191
60.7
Ec-16_000700
Ectocarpus siliculosus
4.7e-53
209.1
193
46.6
gene13040
Fragilariopsis cylindrus
4.0e-52
206.1
109
92.7
Naga_100008g49
Nannochloropsis gaditana
8.3e-50
198.4
193
47.7
Naga_100001g62
Nannochloropsis gaditana
5.9e-40
165.6
194
44.3
pte730230
Paramecium tetraurelia
2.1e-16
87.4
209
26.3
pte239960
Paramecium tetraurelia
6.0e-16
85.9
200
28.0
pte765510
Paramecium tetraurelia
1.3e-15
84.7
212
26.9
pte120290
Paramecium tetraurelia
3.9e-15
83.2
199
27.1
pte743780
Paramecium tetraurelia
5.1e-15
82.8
211
24.6
pte347660
Paramecium tetraurelia
1.1e-14
81.6
200
27.5
pte696730
Paramecium tetraurelia
1.5e-14
81.3
217
24.0
pte388430
Paramecium tetraurelia
2.5e-14
80.5
197
26.9
pte168430
Paramecium tetraurelia
4.3e-14
79.7
199
27.1
pte323990
Paramecium tetraurelia
1.2e-13
78.2
197
25.9
pte351730
Paramecium tetraurelia
2.1e-13
77.4
198
24.2
pte374670
Paramecium tetraurelia
2.1e-13
77.4
196
27.0
pte337740
Paramecium tetraurelia
4.7e-13
76.3
197
26.4
pte391610
Paramecium tetraurelia
8.1e-13
75.5
198
26.3
pte436320
Paramecium tetraurelia
1.1e-12
75.1
198
24.2
pte15350
Paramecium tetraurelia
4.0e-12
73.2
195
27.2
pte715390
Paramecium tetraurelia
5.2e-12
72.8
198
24.7
pte183540
Paramecium tetraurelia
6.8e-12
72.4
205
26.8
pte697130
Paramecium tetraurelia
1.2e-11
71.6
202
25.7
pte557330
Paramecium tetraurelia
5.8e-11
69.3
197
26.9
pte138840
Paramecium tetraurelia
1.3e-10
68.2
177
26.0
pte743420
Paramecium tetraurelia
1.7e-10
67.8
155
27.1
pte461900
Paramecium tetraurelia
2.2e-10
67.4
204
23.0
pte765930
Paramecium tetraurelia
4.9e-10
66.2
155
25.8
pte730690
Paramecium tetraurelia
8.4e-10
65.5
157
29.3
pte11790
Paramecium tetraurelia
1.4e-09
64.7
195
24.1
pte284630
Paramecium tetraurelia
1.4e-09
64.7
205
24.9
pte530050
Paramecium tetraurelia
1.4e-09
64.7
204
23.5
pte77300
Paramecium tetraurelia
1.9e-09
64.3
177
23.7
pte540320
Paramecium tetraurelia
2.4e-09
63.9
206
24.3
pte87320
Paramecium tetraurelia
9.3e-09
62.0
196
23.0
emh156590
Emiliania huxleyi
1.6e-08
61.2
176
27.3
pte661160
Paramecium tetraurelia
2.1e-08
60.8
207
24.2
pte654870
Paramecium tetraurelia
3.5e-08
60.1
204
24.0
AA0001G05650
Aureococcus anophagefferens
7.8e-08
58.9
63
39.7
pte344590
Paramecium tetraurelia
7.8e-08
58.9
183
25.7
pte751340
Paramecium tetraurelia
2.3e-07
57.4
206
22.8
Cre12.g517850
Chlamydomonas reinhardtii
3.0e-07
57.0
58
37.9
FBgn0035983
Drosophila melanogaster
2.5e-06
53.9
69
37.7
emh234870
Emiliania huxleyi
2.5e-06
53.9
70
30.0
emh328610
Emiliania huxleyi
5.6e-06
52.8
62
33.9
emh742460
Emiliania huxleyi
7.3e-06
52.4
62
40.3
emh144950
Emiliania huxleyi
7.3e-06
52.4
62
40.3
ENSG00000145416
Homo sapiens
9.6e-06
52.0
69
39.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (35 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing