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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tps102080
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tps102080
Thalassiosira pseudonana
3.1e-196
685.6
348
100.0
CC00G100620
Cyclotella cryptica
7.8e-139
495.0
355
70.1
tho22780
Thalassiosira oceanica
3.4e-110
399.8
348
59.2
sya00G203970
Synedra acus
6.9e-87
322.4
369
50.1
Sro248_g098450
Seminavis robusta
3.8e-85
316.6
348
48.0
gene2067
Fragilariopsis cylindrus
2.0e-81
304.3
349
45.6
Sro1862_g302260
Seminavis robusta
6.9e-79
295.8
367
46.6
ps00G116290
Pseudo-nitzschia multiseries
2.8e-72
273.9
316
47.8
tho542420
Thalassiosira oceanica
3.4e-41
170.6
140
60.0
AT3G53180
Arabidopsis thaliana
1.7e-40
168.3
357
30.3
Pp3c14_19260
Physcomitrella patens
1.7e-40
168.3
356
30.3
Pp3c1_32960
Physcomitrella patens
2.2e-40
167.9
356
30.1
Naga_100003g119
Nannochloropsis gaditana
1.7e-37
158.3
315
35.6
AA0035G00200
Aureococcus anophagefferens
8.9e-26
119.4
367
27.0
ccr193380
Chondrus crispus
7.5e-25
116.3
319
29.5
Pp3c20_2470
Physcomitrella patens
8.3e-24
112.8
344
26.5
Pp3c21_9940
Physcomitrella patens
1.1e-23
112.5
353
25.2
Pp3c22_1270
Physcomitrella patens
1.6e-22
108.6
353
24.1
Pp3c26_11640
Physcomitrella patens
6.0e-22
106.7
388
26.8
Cre03.g146627
Chlamydomonas reinhardtii
1.0e-21
105.9
453
23.8
sya00G88240
Synedra acus
1.6e-19
98.6
227
31.3
emh283560
Emiliania huxleyi
6.8e-18
93.2
387
25.3
CC00G123430
Cyclotella cryptica
3.2e-15
84.3
89
52.8
ENSG00000146166
Homo sapiens
9.2e-15
82.8
359
23.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing