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Interactive Phylogenetics Module
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho689540
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho689540
Thalassiosira oceanica
1.9e-26
119.0
58
100.0
tho365980
Thalassiosira oceanica
2.4e-21
102.1
54
92.6
ptri84260
Phaeodactylum tricornutum
4.3e-18
91.3
57
75.4
tps21450
Thalassiosira pseudonana
7.4e-18
90.5
57
73.7
CC00G172260
Cyclotella cryptica
2.1e-17
89.0
57
71.9
Sro795_g203520
Seminavis robusta
3.7e-17
88.2
57
71.9
fso90020
Fistulifera solaris
8.2e-17
87.0
57
70.2
PSNMU-V1.4_AUG-EV-PASAV3_0013860
Pseudo-nitzschia multistriata
1.4e-16
86.3
57
70.2
fso195980
Fistulifera solaris
1.8e-16
85.9
57
68.4
sya00G232750
Synedra acus
6.9e-16
84.0
57
68.4
gene1411
Fragilariopsis cylindrus
1.5e-15
82.8
57
70.2
ps00G70950
Pseudo-nitzschia multiseries
1.5e-15
82.8
57
64.9
Ec-24_003120
Ectocarpus siliculosus
8.7e-11
67.0
55
58.2
AA0015G01700
Aureococcus anophagefferens
1.5e-10
66.2
57
56.1
Naga_100067g27
Nannochloropsis gaditana
1.3e-09
63.2
55
56.4
emh569500
Emiliania huxleyi
6.3e-09
60.8
57
50.9
Pp3c16_6690
Physcomitrella patens
5.3e-08
57.8
55
50.9
Pp3c5_12730
Physcomitrella patens
9.0e-08
57.0
55
50.9
Cre10.g430950
Chlamydomonas reinhardtii
4.5e-07
54.7
56
50.0
AT3G19210
Arabidopsis thaliana
1.3e-06
53.1
55
47.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing