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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho583900
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho583900
Thalassiosira oceanica
1.6e-85
316.6
151
100.0
tho207000
Thalassiosira oceanica
1.6e-43
177.2
114
70.2
tho24160
Thalassiosira oceanica
2.0e-43
176.8
113
72.6
tho225040
Thalassiosira oceanica
1.2e-38
161.0
114
67.5
tho119280
Thalassiosira oceanica
4.3e-33
142.5
118
61.0
tho31100
Thalassiosira oceanica
1.3e-26
120.9
114
51.8
tho15640
Thalassiosira oceanica
7.3e-25
115.2
111
49.5
tho269800
Thalassiosira oceanica
4.4e-22
105.9
118
48.3
tho113620
Thalassiosira oceanica
6.4e-21
102.1
118
46.6
CC00G87590
Cyclotella cryptica
1.6e-19
97.4
108
48.1
CC00G139280
Cyclotella cryptica
4.6e-19
95.9
109
43.1
CC00G110590
Cyclotella cryptica
6.0e-19
95.5
106
43.4
CC00G183890
Cyclotella cryptica
3.0e-18
93.2
137
40.1
CC00G67280
Cyclotella cryptica
3.9e-18
92.8
108
41.7
CC00G177980
Cyclotella cryptica
3.9e-18
92.8
116
45.7
tho02320
Thalassiosira oceanica
5.1e-18
92.4
131
40.5
CC00G28500
Cyclotella cryptica
3.3e-17
89.7
105
43.8
tho146100
Thalassiosira oceanica
9.5e-17
88.2
113
41.6
CC00G110470
Cyclotella cryptica
3.5e-11
69.7
71
49.3
Sro11_g008601
Seminavis robusta
1.0e-10
68.2
105
36.2
tps36400
Thalassiosira pseudonana
2.1e-08
60.5
38
65.8
ps00G111280
Pseudo-nitzschia multiseries
3.6e-08
59.7
61
45.9
Sro1693_g291681
Seminavis robusta
2.6e-06
53.5
79
29.1
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (11 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (0 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (8 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing