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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho571860
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho571860
Thalassiosira oceanica
4.3e-176
618.6
320
100.0
tho336920
Thalassiosira oceanica
4.9e-71
269.6
310
50.3
tho55180
Thalassiosira oceanica
2.7e-61
237.3
324
42.3
tho273200
Thalassiosira oceanica
1.3e-60
235.0
324
42.3
tho288900
Thalassiosira oceanica
6.2e-50
199.5
285
42.8
CC00G78130
Cyclotella cryptica
1.6e-37
158.3
215
41.4
CC00G118650
Cyclotella cryptica
9.6e-35
149.1
217
41.9
CC00G137730
Cyclotella cryptica
1.3e-34
148.7
186
46.2
CC00G108410
Cyclotella cryptica
6.2e-34
146.4
199
44.7
CC00G209510
Cyclotella cryptica
1.1e-33
145.6
186
44.6
CC00G171140
Cyclotella cryptica
2.4e-33
144.4
186
40.3
CC00G117070
Cyclotella cryptica
3.1e-33
144.1
186
45.2
CC00G24730
Cyclotella cryptica
9.0e-33
142.5
186
45.2
CC00G103300
Cyclotella cryptica
2.0e-32
141.4
239
36.0
CC00G150720
Cyclotella cryptica
2.0e-32
141.4
199
43.7
CC00G57070
Cyclotella cryptica
4.5e-32
140.2
204
37.3
CC00G17990
Cyclotella cryptica
5.8e-32
139.8
199
42.7
CC00G54730
Cyclotella cryptica
7.6e-32
139.4
199
41.7
CC00G79940
Cyclotella cryptica
7.6e-32
139.4
162
48.8
CC00G104650
Cyclotella cryptica
1.0e-31
139.0
186
39.2
sya00G231330
Synedra acus
1.0e-31
139.0
188
41.5
CC00G27860
Cyclotella cryptica
2.2e-31
137.9
159
49.1
PSNMU-V1.4_AUG-EV-PASAV3_0071490
Pseudo-nitzschia multistriata
2.9e-31
137.5
211
39.3
CC00G190230
Cyclotella cryptica
1.4e-30
135.2
219
40.2
fso36690
Fistulifera solaris
4.2e-30
133.7
186
39.2
CC00G143740
Cyclotella cryptica
1.2e-29
132.1
170
44.7
fso122320
Fistulifera solaris
2.1e-29
131.3
183
40.4
tho53680
Thalassiosira oceanica
2.7e-29
131.0
172
44.8
CC00G177430
Cyclotella cryptica
4.6e-29
130.2
169
45.0
sya00G50540
Synedra acus
4.6e-29
130.2
238
34.9
PSNMU-V1.4_AUG-EV-PASAV3_0053460
Pseudo-nitzschia multistriata
6.1e-29
129.8
255
34.9
CC00G118060
Cyclotella cryptica
7.9e-29
129.4
169
44.4
PSNMU-V1.4_AUG-EV-PASAV3_0006880
Pseudo-nitzschia multistriata
1.0e-28
129.0
183
42.1
sya00G186490
Synedra acus
1.8e-28
128.3
189
39.2
CC00G169820
Cyclotella cryptica
2.3e-28
127.9
170
43.5
sya00G154570
Synedra acus
2.3e-28
127.9
194
39.7
sya00G119770
Synedra acus
3.0e-28
127.5
186
38.2
tho72160
Thalassiosira oceanica
3.0e-28
127.5
239
36.4
PSNMU-V1.4_AUG-EV-PASAV3_0101770
Pseudo-nitzschia multistriata
3.9e-28
127.1
253
33.2
sya00G186380
Synedra acus
3.9e-28
127.1
180
38.9
PSNMU-V1.4_AUG-EV-PASAV3_0078090
Pseudo-nitzschia multistriata
6.7e-28
126.3
186
39.2
PSNMU-V1.4_AUG-EV-PASAV3_0007450
Pseudo-nitzschia multistriata
6.7e-28
126.3
183
41.0
sya00G203870
Synedra acus
6.7e-28
126.3
235
33.2
sya00G188500
Synedra acus
1.1e-27
125.6
207
35.3
fso160210
Fistulifera solaris
3.3e-27
124.0
181
39.8
sya00G113100
Synedra acus
3.3e-27
124.0
181
38.7
sya00G157350
Synedra acus
3.3e-27
124.0
185
38.4
sya00G82730
Synedra acus
4.3e-27
123.6
181
37.6
sya00G16890
Synedra acus
5.7e-27
123.2
184
36.4
sya00G45780
Synedra acus
1.3e-26
122.1
224
35.3
sya00G61380
Synedra acus
1.6e-26
121.7
227
34.4
sya00G179270
Synedra acus
1.6e-26
121.7
185
38.4
sya00G169270
Synedra acus
2.2e-26
121.3
183
37.2
fso186580
Fistulifera solaris
2.8e-26
120.9
202
37.6
sya00G115070
Synedra acus
2.8e-26
120.9
223
30.9
sya00G67250
Synedra acus
4.8e-26
120.2
180
37.2
sya00G113790
Synedra acus
6.3e-26
119.8
180
36.1
sya00G238470
Synedra acus
6.3e-26
119.8
185
38.9
fso202720
Fistulifera solaris
1.1e-25
119.0
202
37.1
PSNMU-V1.4_AUG-EV-PASAV3_0095170
Pseudo-nitzschia multistriata
1.4e-25
118.6
244
34.4
fso112160
Fistulifera solaris
1.8e-25
118.2
185
37.3
sya00G106280
Synedra acus
2.4e-25
117.9
186
36.0
sya00G206420
Synedra acus
2.4e-25
117.9
183
37.2
sya00G256620
Synedra acus
2.4e-25
117.9
183
37.2
fso21490
Fistulifera solaris
3.1e-25
117.5
193
37.8
fso87390
Fistulifera solaris
3.1e-25
117.5
202
35.6
sya00G119800
Synedra acus
3.1e-25
117.5
180
36.7
sya00G88730
Synedra acus
4.1e-25
117.1
276
30.4
CC00G193540
Cyclotella cryptica
6.9e-25
116.3
142
45.8
sya00G59210
Synedra acus
9.0e-25
115.9
186
33.3
tho57340
Thalassiosira oceanica
9.0e-25
115.9
206
35.9
CC00G68020
Cyclotella cryptica
1.2e-24
115.5
186
38.7
sya00G04380
Synedra acus
2.0e-24
114.8
186
36.0
sya00G132040
Synedra acus
2.6e-24
114.4
183
36.1
sya00G190030
Synedra acus
2.6e-24
114.4
186
33.3
fso105830
Fistulifera solaris
3.4e-24
114.0
241
34.9
fso109400
Fistulifera solaris
5.9e-24
113.2
186
38.2
sya00G164780
Synedra acus
5.9e-24
113.2
186
39.8
sya00G255000
Synedra acus
7.7e-24
112.8
165
40.6
CC00G92050
Cyclotella cryptica
1.3e-23
112.1
172
41.9
sya00G68790
Synedra acus
1.7e-23
111.7
185
31.9
fso159750
Fistulifera solaris
2.9e-23
110.9
204
34.8
PSNMU-V1.4_AUG-EV-PASAV3_0061400
Pseudo-nitzschia multistriata
3.8e-23
110.5
186
37.1
sya00G08500
Synedra acus
1.1e-22
109.0
177
33.9
sya00G49760
Synedra acus
1.4e-22
108.6
176
38.1
sya00G112170
Synedra acus
1.4e-22
108.6
168
35.7
tho37140
Thalassiosira oceanica
1.4e-22
108.6
150
42.7
fso63240
Fistulifera solaris
4.2e-22
107.1
186
37.1
PSNMU-V1.4_AUG-EV-PASAV3_0085240
Pseudo-nitzschia multistriata
4.2e-22
107.1
183
35.5
sya00G57800
Synedra acus
5.5e-22
106.7
218
28.4
PSNMU-V1.4_AUG-EV-PASAV3_0088390
Pseudo-nitzschia multistriata
7.2e-22
106.3
186
36.0
sya00G142100
Synedra acus
7.2e-22
106.3
181
29.3
sya00G135190
Synedra acus
9.4e-22
105.9
182
34.1
sya00G59770
Synedra acus
2.7e-21
104.4
163
39.3
sya00G89860
Synedra acus
4.6e-21
103.6
181
34.8
fso102290
Fistulifera solaris
6.1e-21
103.2
186
36.0
fso85840
Fistulifera solaris
5.1e-20
100.1
186
36.6
sya00G72070
Synedra acus
5.1e-20
100.1
167
37.7
sya00G215600
Synedra acus
5.1e-20
100.1
227
32.2
ps00G164800
Pseudo-nitzschia multiseries
8.8e-20
99.4
167
34.7
sya00G114720
Synedra acus
1.1e-19
99.0
165
36.4
sya00G185210
Synedra acus
1.5e-19
98.6
154
35.1
sya00G19550
Synedra acus
2.0e-19
98.2
189
30.7
sya00G133400
Synedra acus
2.0e-19
98.2
144
38.9
sya00G13980
Synedra acus
2.5e-19
97.8
181
33.7
sya00G15860
Synedra acus
2.5e-19
97.8
146
38.4
sya00G86990
Synedra acus
3.3e-19
97.4
181
34.3
sya00G229010
Synedra acus
4.3e-19
97.1
183
35.0
sya00G259760
Synedra acus
4.3e-19
97.1
161
36.0
sya00G225600
Synedra acus
7.4e-19
96.3
140
37.1
sya00G111980
Synedra acus
1.3e-18
95.5
130
40.0
sya00G130570
Synedra acus
1.3e-18
95.5
144
36.1
sya00G195560
Synedra acus
1.7e-18
95.1
159
34.6
PSNMU-V1.4_AUG-EV-PASAV3_0039690
Pseudo-nitzschia multistriata
2.2e-18
94.7
187
31.6
sya00G236290
Synedra acus
2.2e-18
94.7
146
37.7
sya00G244460
Synedra acus
2.8e-18
94.4
181
32.6
PSNMU-V1.4_AUG-EV-PASAV3_0055470
Pseudo-nitzschia multistriata
4.8e-18
93.6
187
31.0
sya00G145070
Synedra acus
1.4e-17
92.0
188
35.1
sya00G155040
Synedra acus
1.4e-17
92.0
172
33.1
CC00G27330
Cyclotella cryptica
2.4e-17
91.3
102
46.1
sya00G101820
Synedra acus
2.4e-17
91.3
146
38.4
sya00G176830
Synedra acus
3.1e-17
90.9
133
35.3
ps00G39960
Pseudo-nitzschia multiseries
5.3e-17
90.1
184
34.8
sya00G119550
Synedra acus
6.9e-17
89.7
113
42.5
ps00G187590
Pseudo-nitzschia multiseries
1.2e-16
89.0
163
36.2
sya00G123220
Synedra acus
2.0e-16
88.2
186
28.5
sya00G178370
Synedra acus
3.4e-16
87.4
121
41.3
sya00G131100
Synedra acus
7.7e-16
86.3
178
29.8
CC00G202750
Cyclotella cryptica
1.0e-15
85.9
84
56.0
sya00G72270
Synedra acus
1.3e-15
85.5
147
34.0
sya00G15970
Synedra acus
1.7e-15
85.1
131
35.9
sya00G49600
Synedra acus
1.7e-15
85.1
133
33.1
sya00G225020
Synedra acus
1.7e-15
85.1
150
35.3
sya00G97280
Synedra acus
2.2e-15
84.7
121
42.1
tho296820
Thalassiosira oceanica
6.5e-15
83.2
206
31.6
sya00G09330
Synedra acus
8.5e-15
82.8
176
30.7
sya00G94710
Synedra acus
1.1e-14
82.4
190
31.6
sya00G15440
Synedra acus
1.4e-14
82.0
106
43.4
ps00G04250
Pseudo-nitzschia multiseries
1.9e-14
81.6
139
36.7
sya00G140730
Synedra acus
3.2e-14
80.9
108
39.8
sya00G97450
Synedra acus
4.2e-14
80.5
163
35.0
sya00G187940
Synedra acus
4.2e-14
80.5
115
38.3
sya00G32590
Synedra acus
7.2e-14
79.7
108
40.7
sya00G88750
Synedra acus
7.2e-14
79.7
109
41.3
sya00G267420
Synedra acus
7.2e-14
79.7
180
30.6
sya00G264790
Synedra acus
9.4e-14
79.3
184
28.8
sya00G155570
Synedra acus
1.2e-13
79.0
119
37.8
sya00G206300
Synedra acus
1.2e-13
79.0
141
35.5
sya00G116690
Synedra acus
2.7e-13
77.8
126
36.5
tho82420
Thalassiosira oceanica
4.7e-13
77.0
101
41.6
sya00G57350
Synedra acus
1.4e-12
75.5
197
30.5
sya00G133110
Synedra acus
1.4e-12
75.5
177
28.2
gene12844
Fragilariopsis cylindrus
1.8e-12
75.1
187
28.9
sya00G247750
Synedra acus
1.8e-12
75.1
98
41.8
sya00G253150
Synedra acus
1.8e-12
75.1
110
39.1
sya00G76390
Synedra acus
2.3e-12
74.7
89
43.8
sya00G256420
Synedra acus
2.3e-12
74.7
161
32.3
sya00G11500
Synedra acus
6.7e-12
73.2
84
45.2
sya00G31900
Synedra acus
6.7e-12
73.2
104
38.5
sya00G08720
Synedra acus
1.1e-11
72.4
185
29.2
sya00G93840
Synedra acus
1.1e-11
72.4
168
32.7
sya00G152220
Synedra acus
1.5e-11
72.0
131
34.4
sya00G97480
Synedra acus
2.0e-11
71.6
104
40.4
sya00G89830
Synedra acus
2.6e-11
71.2
119
34.5
gene11370
Fragilariopsis cylindrus
3.3e-11
70.9
177
27.7
sya00G130750
Synedra acus
4.4e-11
70.5
119
33.6
sya00G220860
Synedra acus
1.3e-10
68.9
144
31.2
sya00G83100
Synedra acus
2.2e-10
68.2
123
34.1
sya00G48890
Synedra acus
2.8e-10
67.8
132
31.8
sya00G40640
Synedra acus
3.7e-10
67.4
122
32.8
sya00G24020
Synedra acus
6.3e-10
66.6
170
24.7
sya00G111970
Synedra acus
1.4e-09
65.5
104
35.6
sya00G51920
Synedra acus
1.8e-09
65.1
86
34.9
sya00G73230
Synedra acus
4.1e-09
63.9
130
30.8
sya00G175340
Synedra acus
5.3e-09
63.5
131
31.3
ps00G152180
Pseudo-nitzschia multiseries
7.0e-09
63.2
157
28.7
sya00G11470
Synedra acus
1.2e-08
62.4
102
34.3
ps00G134290
Pseudo-nitzschia multiseries
2.6e-08
61.2
81
40.7
sya00G45570
Synedra acus
3.5e-08
60.8
71
40.8
PSNMU-V1.4_AUG-EV-PASAV3_0010630
Pseudo-nitzschia multistriata
5.9e-08
60.1
81
42.0
sya00G194760
Synedra acus
5.9e-08
60.1
95
40.0
CC00G58140
Cyclotella cryptica
7.7e-08
59.7
49
57.1
sya00G12890
Synedra acus
7.7e-08
59.7
124
30.6
sya00G116680
Synedra acus
1.0e-07
59.3
112
33.9
sya00G48520
Synedra acus
1.3e-07
58.9
97
36.1
sya00G245270
Synedra acus
1.3e-07
58.9
101
38.6
sya00G261860
Synedra acus
8.5e-07
56.2
92
40.2
ps00G18700
Pseudo-nitzschia multiseries
1.9e-06
55.1
142
27.5
ps00G09640
Pseudo-nitzschia multiseries
2.5e-06
54.7
160
26.9
tho674580
Thalassiosira oceanica
3.2e-06
54.3
96
32.3
sya00G241890
Synedra acus
4.2e-06
53.9
92
39.1
sya00G251420
Synedra acus
9.4e-06
52.8
145
28.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (12 genes)
Pseudo-nitzschia multiseries (8 genes)
Fistulifera solaris (14 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (27 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (0 genes)
Synedra acus (116 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (13 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
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