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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho513220
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho513220
Thalassiosira oceanica
1.1e-113
411.0
247
100.0
CC00G196600
Cyclotella cryptica
3.9e-68
259.6
192
63.5
sya00G45860
Synedra acus
7.4e-59
228.8
182
57.7
sya00G198400
Synedra acus
7.4e-59
228.8
182
57.7
sya00G268550
Synedra acus
3.7e-58
226.5
180
57.8
Sro624_g177390
Seminavis robusta
1.7e-55
217.6
175
58.3
tps215230
Thalassiosira pseudonana
1.1e-54
214.9
156
67.9
PSNMU-V1.4_AUG-EV-PASAV3_0088620
Pseudo-nitzschia multistriata
3.2e-54
213.4
183
53.6
ptri47630
Phaeodactylum tricornutum
2.2e-47
190.7
175
52.6
fso97000
Fistulifera solaris
9.7e-43
175.3
173
50.9
gene14950
Fragilariopsis cylindrus
1.3e-39
164.9
145
52.4
Sro32_g020930
Seminavis robusta
5.0e-39
162.9
165
49.7
CC00G161610
Cyclotella cryptica
6.3e-34
146.0
185
43.2
tho242740
Thalassiosira oceanica
2.5e-30
134.0
205
39.5
ps00G09600
Pseudo-nitzschia multiseries
2.5e-22
107.5
88
53.4
ptri235830
Phaeodactylum tricornutum
3.7e-18
93.6
87
49.4
CM19G03680
Cyanidioschyzon merolae
2.4e-17
90.9
146
39.7
emh281440
Emiliania huxleyi
2.7e-16
87.4
119
43.7
emh427020
Emiliania huxleyi
3.5e-16
87.0
119
42.9
gsu86590
Galdieria sulphuraria
1.3e-15
85.1
154
36.4
YML032C
Saccharomyces cerevisiae strain S288C
2.9e-15
84.0
124
44.4
SPAC30D11.10
Schizosaccharomyces pombe
1.9e-14
81.3
120
43.3
SPBC119.14
Schizosaccharomyces pombe
1.8e-12
74.7
118
37.3
ENSG00000002016
Homo sapiens
5.2e-12
73.2
146
37.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing