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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho357060
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho357060
Thalassiosira oceanica
6.1e-131
468.4
270
100.0
tps147910
Thalassiosira pseudonana
5.2e-82
305.8
263
73.8
CC00G41180
Cyclotella cryptica
1.4e-79
297.7
268
70.9
ps00G145580
Pseudo-nitzschia multiseries
3.4e-65
250.0
266
56.8
PSNMU-V1.4_AUG-EV-PASAV3_0096010
Pseudo-nitzschia multistriata
1.2e-59
231.5
266
50.0
sya00G83970
Synedra acus
2.4e-55
217.2
257
52.9
tho589540
Thalassiosira oceanica
1.0e-53
211.8
105
100.0
Sro68_g037840
Seminavis robusta
7.3e-52
205.7
263
48.7
Sro740_g195550
Seminavis robusta
8.1e-51
202.2
263
47.1
ptri147470
Phaeodactylum tricornutum
4.0e-50
199.9
268
45.9
fso167070
Fistulifera solaris
6.9e-50
199.1
260
46.5
fso121810
Fistulifera solaris
5.4e-47
189.5
260
50.4
Naga_100199g6
Nannochloropsis gaditana
7.1e-47
189.1
254
47.6
Sro731_g194150
Seminavis robusta
8.4e-40
165.6
217
48.8
AT1G47260
Arabidopsis thaliana
6.2e-27
122.9
229
33.6
gene2813
Fragilariopsis cylindrus
2.0e-25
117.9
170
52.9
AT1G19580
Arabidopsis thaliana
2.6e-25
117.5
229
32.8
Pp3c7_4200
Physcomitrella patens
1.1e-20
102.1
215
34.9
CM13G00520
Cyanidioschyzon merolae
1.5e-20
101.7
222
36.9
gsu30790
Galdieria sulphuraria
4.3e-20
100.1
225
38.2
pte725170
Paramecium tetraurelia
1.1e-18
95.5
213
30.0
pte791750
Paramecium tetraurelia
3.1e-18
94.0
217
30.4
Pp3c11_22520
Physcomitrella patens
3.4e-17
90.5
215
32.1
gsu91670
Galdieria sulphuraria
1.1e-15
85.5
215
28.4
AA0003G02530
Aureococcus anophagefferens
2.5e-15
84.3
167
31.1
AA0230G00030
Aureococcus anophagefferens
2.5e-15
84.3
167
31.1
ps00G81530
Pseudo-nitzschia multiseries
2.5e-15
84.3
204
31.9
Pp3c1_7500
Physcomitrella patens
2.1e-14
81.3
162
30.2
AT5G66510
Arabidopsis thaliana
4.6e-14
80.1
240
30.8
gene4461
Fragilariopsis cylindrus
1.4e-13
78.6
162
32.1
Cre06.g293850
Chlamydomonas reinhardtii
3.0e-13
77.4
192
27.6
Pp3c4_16870
Physcomitrella patens
8.8e-13
75.9
236
30.1
Cre09.g415850
Chlamydomonas reinhardtii
1.9e-12
74.7
267
34.8
fso23950
Fistulifera solaris
5.7e-12
73.2
166
31.3
fso198020
Fistulifera solaris
1.3e-11
72.0
166
30.1
ptri08410
Phaeodactylum tricornutum
2.8e-11
70.9
162
30.2
ptri08530
Phaeodactylum tricornutum
2.8e-11
70.9
162
30.2
Sro796_g203670
Seminavis robusta
2.0e-09
64.7
141
29.8
Cre12.g516450
Chlamydomonas reinhardtii
2.6e-09
64.3
85
41.2
sya00G77040
Synedra acus
7.7e-09
62.8
162
30.2
emh726740
Emiliania huxleyi
1.7e-08
61.6
98
33.7
Ec-07_004610
Ectocarpus siliculosus
1.7e-08
61.6
50
58.0
gsu34770
Galdieria sulphuraria
1.7e-08
61.6
159
24.5
emh676960
Emiliania huxleyi
2.9e-08
60.8
51
51.0
Naga_100187g5
Nannochloropsis gaditana
3.8e-08
60.5
105
38.1
ps00G40950
Pseudo-nitzschia multiseries
6.5e-08
59.7
193
26.4
pte777030
Paramecium tetraurelia
1.1e-07
58.9
222
29.3
ccr103560
Chondrus crispus
4.2e-07
57.0
227
36.6
AA0002G00020
Aureococcus anophagefferens
1.2e-06
55.5
66
39.4
CC00G151430
Cyclotella cryptica
1.6e-06
55.1
153
32.7
pte113000
Paramecium tetraurelia
3.6e-06
53.9
50
46.0
pte474410
Paramecium tetraurelia
3.6e-06
53.9
50
46.0
Ec-10_002770
Ectocarpus siliculosus
6.1e-06
53.1
48
50.0
sya00G174380
Synedra acus
7.9e-06
52.8
152
31.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (4 genes)
Synedra acus (3 genes)
Physcomitrella patens (4 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing