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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho323180
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho323180
Thalassiosira oceanica
1.6e-146
520.0
250
100.0
tps157300
Thalassiosira pseudonana
7.2e-94
345.1
186
83.9
CC00G171030
Cyclotella cryptica
6.9e-89
328.6
186
80.1
sya00G35270
Synedra acus
8.2e-74
278.5
185
66.5
sya00G35240
Synedra acus
1.1e-73
278.1
185
66.5
ps00G00300
Pseudo-nitzschia multiseries
4.2e-70
266.2
185
64.3
gene18370
Fragilariopsis cylindrus
3.6e-69
263.1
190
63.2
Sro436_g142650
Seminavis robusta
1.8e-65
250.8
186
62.4
ptri210630
Phaeodactylum tricornutum
1.1e-62
241.5
189
57.7
Sro137_g064540
Seminavis robusta
5.7e-59
229.2
192
56.2
fso121640
Fistulifera solaris
1.1e-57
224.9
205
49.8
fso30370
Fistulifera solaris
1.2e-56
221.5
203
47.8
Ec-25_001750
Ectocarpus siliculosus
8.6e-47
188.7
195
45.6
SPAC16E8.15
Schizosaccharomyces pombe
1.5e-38
161.4
211
41.7
AT4G18040
Arabidopsis thaliana
3.6e-37
156.8
178
42.7
Pp3c11_1600
Physcomitrella patens
1.1e-36
155.2
199
38.7
Pp3c2_32310
Physcomitrella patens
2.0e-35
151.0
227
37.0
Pp3c1_5840
Physcomitrella patens
2.0e-35
151.0
189
38.1
SPBC1709.18
Schizosaccharomyces pombe
4.4e-35
149.8
177
42.4
CM14G00500
Cyanidioschyzon merolae
1.3e-34
148.3
197
40.6
Pp3c1_5850
Physcomitrella patens
2.2e-34
147.5
216
36.1
YOL139C
Saccharomyces cerevisiae strain S288C
2.7e-32
140.6
179
41.3
Cre03.g199900
Chlamydomonas reinhardtii
5.1e-31
136.3
192
35.9
FBgn0015218
Drosophila melanogaster
1.1e-30
135.2
182
39.6
WBGene00002061
Caenorhabditis elegans
1.2e-29
131.7
172
36.0
Naga_100122g15
Nannochloropsis gaditana
2.1e-29
131.0
178
36.0
AT1G29590
Arabidopsis thaliana
2.8e-29
130.6
167
38.3
AT1G29550
Arabidopsis thaliana
3.6e-29
130.2
167
38.3
ENSG00000175766
Homo sapiens
2.3e-28
127.5
176
38.1
ccr145140
Chondrus crispus
5.2e-28
126.3
190
35.3
FBgn0040368
Drosophila melanogaster
5.2e-28
126.3
173
39.3
ENSG00000151247
Homo sapiens
1.2e-27
125.2
236
31.8
AT5G35620
Arabidopsis thaliana
2.0e-27
124.4
177
37.3
CC00G197570
Cyclotella cryptica
8.3e-26
119.0
160
37.5
ENSG00000135930
Homo sapiens
1.4e-25
118.2
186
34.4
FBgn0035709
Drosophila melanogaster
3.2e-25
117.1
215
34.4
tps176900
Thalassiosira pseudonana
3.2e-25
117.1
162
35.2
gsu34730
Galdieria sulphuraria
5.4e-25
116.3
189
31.7
FBgn0035823
Drosophila melanogaster
7.8e-24
112.5
170
35.9
Sro767_g199490
Seminavis robusta
2.3e-23
110.9
158
33.5
FBgn0039622
Drosophila melanogaster
5.1e-23
109.8
144
38.2
FBgn0265089
Drosophila melanogaster
6.6e-23
109.4
177
34.5
gene8814
Fragilariopsis cylindrus
8.6e-23
109.0
161
35.4
tho58860
Thalassiosira oceanica
1.1e-22
108.6
160
36.2
WBGene00002060
Caenorhabditis elegans
2.5e-22
107.5
183
33.9
WBGene00002059
Caenorhabditis elegans
4.3e-22
106.7
182
31.3
Ec-20_003570
Ectocarpus siliculosus
4.3e-22
106.7
176
31.8
Pp3c26_10900
Physcomitrella patens
4.3e-22
106.7
180
32.8
fso60690
Fistulifera solaris
7.3e-22
105.9
159
32.7
PSNMU-V1.4_AUG-EV-PASAV3_0117000
Pseudo-nitzschia multistriata
7.3e-22
105.9
161
35.4
fso172940
Fistulifera solaris
1.2e-21
105.1
159
32.7
ps00G181210
Pseudo-nitzschia multiseries
1.6e-21
104.8
161
34.8
ptri210120
Phaeodactylum tricornutum
2.8e-21
104.0
159
33.3
tps01800
Thalassiosira pseudonana
3.6e-21
103.6
133
41.4
emh512940
Emiliania huxleyi
4.7e-21
103.2
161
33.5
emh98110
Emiliania huxleyi
4.7e-21
103.2
161
33.5
sya00G173920
Synedra acus
6.2e-21
102.8
164
34.8
AT5G18110
Arabidopsis thaliana
1.4e-20
101.7
198
28.8
WBGene00002063
Caenorhabditis elegans
9.9e-19
95.5
183
30.6
AA0013G01150
Aureococcus anophagefferens
2.9e-18
94.0
153
35.9
AA0013G01200
Aureococcus anophagefferens
2.9e-18
94.0
153
35.9
WBGene00002062
Caenorhabditis elegans
6.4e-18
92.8
151
32.5
ENSG00000163412
Homo sapiens
1.1e-17
92.0
135
35.6
pte732760
Paramecium tetraurelia
1.5e-14
81.6
157
30.6
Naga_100041g17
Nannochloropsis gaditana
3.3e-14
80.5
177
28.2
AA0030G00030
Aureococcus anophagefferens
9.6e-14
79.0
120
35.0
emh719280
Emiliania huxleyi
9.6e-14
79.0
172
29.1
pte362790
Paramecium tetraurelia
6.2e-13
76.3
177
29.4
pte329420
Paramecium tetraurelia
1.8e-12
74.7
169
29.0
tps105660
Thalassiosira pseudonana
4.0e-12
73.6
143
31.5
pte466050
Paramecium tetraurelia
1.2e-11
72.0
137
29.9
FBgn0053100
Drosophila melanogaster
2.6e-11
70.9
126
28.6
Sro189_g081380
Seminavis robusta
3.4e-11
70.5
128
30.5
emh136760
Emiliania huxleyi
7.6e-11
69.3
144
30.6
pte650480
Paramecium tetraurelia
7.6e-11
69.3
136
28.7
tho595300
Thalassiosira oceanica
9.9e-11
68.9
117
34.2
pte187000
Paramecium tetraurelia
1.7e-10
68.2
169
26.6
CC00G177330
Cyclotella cryptica
1.1e-09
65.5
172
29.1
ptri177170
Phaeodactylum tricornutum
1.4e-09
65.1
146
29.5
sya00G81070
Synedra acus
1.4e-09
65.1
135
26.7
pte699040
Paramecium tetraurelia
5.4e-09
63.2
88
31.8
pte194710
Paramecium tetraurelia
1.7e-07
58.2
107
29.9
ps00G11860
Pseudo-nitzschia multiseries
8.7e-07
55.8
126
24.6
Naga_100799g1
Nannochloropsis gaditana
3.3e-06
53.9
157
26.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (3 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (7 genes)
Caenorhabditis elegans (5 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (4 genes)
Paramecium tetraurelia (8 genes)
Seminavis robusta (4 genes)
Synedra acus (4 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing