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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho298680
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho298680
Thalassiosira oceanica
4.5e-275
948.0
461
100.0
tho53680
Thalassiosira oceanica
1.2e-59
232.3
300
48.3
tho548060
Thalassiosira oceanica
4.0e-50
200.7
148
71.6
tho57340
Thalassiosira oceanica
5.1e-45
183.7
300
40.0
tho296820
Thalassiosira oceanica
4.8e-35
150.6
156
53.2
CC00G103300
Cyclotella cryptica
7.9e-30
133.3
272
34.2
CC00G54730
Cyclotella cryptica
1.0e-29
132.9
272
33.5
CC00G57070
Cyclotella cryptica
3.3e-28
127.9
304
32.6
CC00G108410
Cyclotella cryptica
5.7e-28
127.1
302
30.5
CC00G171140
Cyclotella cryptica
1.6e-27
125.6
303
31.0
CC00G17990
Cyclotella cryptica
5.3e-26
120.6
300
29.3
CC00G117070
Cyclotella cryptica
6.9e-26
120.2
300
29.3
CC00G104650
Cyclotella cryptica
1.2e-25
119.4
304
31.6
CC00G78130
Cyclotella cryptica
1.5e-25
119.0
304
30.6
CC00G202750
Cyclotella cryptica
1.5e-25
119.0
298
31.2
CC00G137730
Cyclotella cryptica
2.6e-25
118.2
298
32.6
CC00G209510
Cyclotella cryptica
2.6e-25
118.2
302
29.8
CC00G58140
Cyclotella cryptica
3.4e-25
117.9
299
31.8
CC00G27860
Cyclotella cryptica
4.5e-25
117.5
299
31.4
CC00G118650
Cyclotella cryptica
4.5e-25
117.5
304
30.6
CC00G171670
Cyclotella cryptica
1.3e-24
115.9
298
30.2
tho82420
Thalassiosira oceanica
5.5e-23
110.5
163
48.5
tho37140
Thalassiosira oceanica
7.2e-23
110.2
299
29.1
tho72160
Thalassiosira oceanica
2.7e-22
108.2
299
29.1
CC00G92050
Cyclotella cryptica
1.8e-21
105.5
210
34.3
CC00G27340
Cyclotella cryptica
5.1e-21
104.0
155
38.7
tho273200
Thalassiosira oceanica
1.1e-18
96.3
302
26.8
tho55180
Thalassiosira oceanica
1.4e-18
95.9
302
26.8
PSNMU-V1.4_AUG-EV-PASAV3_0095170
Pseudo-nitzschia multistriata
6.9e-18
93.6
302
28.1
CC00G190230
Cyclotella cryptica
1.5e-17
92.4
278
29.5
PSNMU-V1.4_AUG-EV-PASAV3_0071490
Pseudo-nitzschia multistriata
2.0e-17
92.0
304
27.6
PSNMU-V1.4_AUG-EV-PASAV3_0010630
Pseudo-nitzschia multistriata
2.6e-17
91.7
302
27.5
tho288900
Thalassiosira oceanica
1.7e-16
89.0
315
25.1
CC00G169820
Cyclotella cryptica
2.9e-16
88.2
300
26.7
PSNMU-V1.4_AUG-EV-PASAV3_0078090
Pseudo-nitzschia multistriata
2.9e-16
88.2
303
27.7
Sro158_g071660
Seminavis robusta
2.9e-16
88.2
152
36.8
fso122320
Fistulifera solaris
3.8e-16
87.8
305
24.9
PSNMU-V1.4_AUG-EV-PASAV3_0007450
Pseudo-nitzschia multistriata
3.8e-16
87.8
302
26.5
PSNMU-V1.4_AUG-EV-PASAV3_0006880
Pseudo-nitzschia multistriata
3.8e-16
87.8
302
26.2
CC00G24730
Cyclotella cryptica
6.5e-16
87.0
273
28.9
PSNMU-V1.4_AUG-EV-PASAV3_0101770
Pseudo-nitzschia multistriata
7.2e-15
83.6
263
28.1
tho579120
Thalassiosira oceanica
2.7e-14
81.6
152
32.2
PSNMU-V1.4_AUG-EV-PASAV3_0076850
Pseudo-nitzschia multistriata
6.1e-14
80.5
157
33.8
fso160210
Fistulifera solaris
1.4e-13
79.3
302
25.8
fso159750
Fistulifera solaris
2.3e-13
78.6
300
26.0
CC00G177430
Cyclotella cryptica
3.9e-13
77.8
155
35.5
sya00G115070
Synedra acus
3.9e-13
77.8
313
27.2
CC00G143740
Cyclotella cryptica
5.1e-13
77.4
274
25.5
sya00G119770
Synedra acus
6.7e-13
77.0
260
28.8
sya00G145070
Synedra acus
8.8e-13
76.6
293
25.6
sya00G07560
Synedra acus
2.0e-12
75.5
148
34.5
CC00G34080
Cyclotella cryptica
3.3e-12
74.7
176
30.7
PSNMU-V1.4_AUG-EV-PASAV3_0053460
Pseudo-nitzschia multistriata
7.4e-12
73.6
301
24.9
fso21490
Fistulifera solaris
9.7e-12
73.2
300
25.0
CC00G79940
Cyclotella cryptica
2.8e-11
71.6
52
61.5
fso112160
Fistulifera solaris
2.8e-11
71.6
300
25.0
PSNMU-V1.4_AUG-EV-PASAV3_0088390
Pseudo-nitzschia multistriata
4.8e-11
70.9
175
31.4
sya00G179270
Synedra acus
4.8e-11
70.9
104
38.5
sya00G142100
Synedra acus
6.3e-11
70.5
303
24.4
CC00G118060
Cyclotella cryptica
1.1e-10
69.7
152
33.6
sya00G111980
Synedra acus
1.1e-10
69.7
283
25.1
CC00G151830
Cyclotella cryptica
1.4e-10
69.3
155
32.9
tho636200
Thalassiosira oceanica
1.8e-10
68.9
50
72.0
PSNMU-V1.4_AUG-EV-PASAV3_0061400
Pseudo-nitzschia multistriata
2.4e-10
68.6
175
30.3
fso186580
Fistulifera solaris
4.1e-10
67.8
302
24.8
CC00G27330
Cyclotella cryptica
1.5e-09
65.9
71
46.5
CC00G150720
Cyclotella cryptica
3.4e-09
64.7
71
45.1
fso87390
Fistulifera solaris
3.4e-09
64.7
302
24.5
fso105830
Fistulifera solaris
5.9e-09
63.9
211
27.5
sya00G155040
Synedra acus
7.7e-09
63.5
52
57.7
CC00G68020
Cyclotella cryptica
1.3e-08
62.8
72
43.1
sya00G51930
Synedra acus
2.2e-08
62.0
143
34.3
tho336920
Thalassiosira oceanica
2.9e-08
61.6
66
43.9
sya00G19730
Synedra acus
5.0e-08
60.8
142
31.7
sya00G236130
Synedra acus
6.5e-08
60.5
141
31.9
PSNMU-V1.4_AUG-EV-PASAV3_0085240
Pseudo-nitzschia multistriata
8.5e-08
60.1
216
27.3
sya00G178370
Synedra acus
8.5e-08
60.1
51
56.9
CC00G148620
Cyclotella cryptica
1.9e-07
58.9
68
42.6
sya00G88730
Synedra acus
2.5e-07
58.5
51
54.9
PSNMU-V1.4_AUG-EV-PASAV3_0055470
Pseudo-nitzschia multistriata
3.2e-07
58.2
215
29.3
sya00G255000
Synedra acus
3.2e-07
58.2
140
32.9
sya00G97450
Synedra acus
9.4e-07
56.6
51
51.0
sya00G97280
Synedra acus
1.2e-06
56.2
51
49.0
fso109400
Fistulifera solaris
1.6e-06
55.8
158
30.4
sya00G57800
Synedra acus
1.6e-06
55.8
50
54.0
sya00G231330
Synedra acus
1.6e-06
55.8
52
51.9
sya00G203870
Synedra acus
2.1e-06
55.5
50
52.0
sya00G245270
Synedra acus
2.1e-06
55.5
84
39.3
sya00G113790
Synedra acus
2.7e-06
55.1
48
56.2
sya00G229010
Synedra acus
2.7e-06
55.1
56
51.8
sya00G49760
Synedra acus
3.6e-06
54.7
52
50.0
sya00G93840
Synedra acus
3.6e-06
54.7
62
45.2
sya00G238470
Synedra acus
3.6e-06
54.7
52
50.0
sya00G68790
Synedra acus
6.1e-06
53.9
48
54.2
sya00G89830
Synedra acus
6.1e-06
53.9
51
49.0
sya00G113100
Synedra acus
6.1e-06
53.9
52
53.8
fso85840
Fistulifera solaris
7.9e-06
53.5
172
29.1
sya00G97480
Synedra acus
7.9e-06
53.5
51
49.0
sya00G186380
Synedra acus
7.9e-06
53.5
52
53.8
sya00G215600
Synedra acus
7.9e-06
53.5
141
32.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (14 genes)
Pseudo-nitzschia multiseries (0 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (31 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (31 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (13 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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