Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho295100
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho295100
Thalassiosira oceanica
0.0e+00
1209.9
618
100.0
CC00G47930
Cyclotella cryptica
2.1e-158
560.8
681
46.8
tps94420
Thalassiosira pseudonana
2.4e-146
520.8
366
67.5
PSNMU-V1.4_AUG-EV-PASAV3_0048960
Pseudo-nitzschia multistriata
6.9e-138
492.7
425
56.9
gene1104
Fragilariopsis cylindrus
1.6e-131
471.5
435
54.3
sya00G151810
Synedra acus
6.2e-131
469.5
422
55.7
ps00G135460
Pseudo-nitzschia multiseries
1.8e-130
468.0
366
60.7
Sro345_g122490
Seminavis robusta
3.1e-130
467.2
377
60.5
ptri190020
Phaeodactylum tricornutum
7.9e-126
452.6
497
49.3
gene8944
Fragilariopsis cylindrus
2.9e-120
434.1
373
57.1
Naga_100445g1
Nannochloropsis gaditana
1.6e-107
391.7
351
55.8
AT5G39840
Arabidopsis thaliana
1.9e-103
378.3
358
50.3
Pp3c11_24680
Physcomitrella patens
1.9e-103
378.3
393
47.6
Ec-11_000550
Ectocarpus siliculosus
1.2e-97
359.0
399
47.6
AA0012G01140
Aureococcus anophagefferens
5.2e-93
343.6
374
49.5
gsu141650
Galdieria sulphuraria
1.4e-85
318.9
353
45.0
AT4G14790
Arabidopsis thaliana
2.0e-84
315.1
414
43.5
gsu110850
Galdieria sulphuraria
9.7e-84
312.8
387
42.1
SPAC637.11
Schizosaccharomyces pombe
3.1e-82
307.8
349
47.6
Naga_100019g77
Nannochloropsis gaditana
2.7e-78
294.7
329
45.9
WBGene00007444
Caenorhabditis elegans
6.1e-78
293.5
345
46.1
YPL029W
Saccharomyces cerevisiae strain S288C
8.0e-78
293.1
341
46.3
FBgn0037232
Drosophila melanogaster
3.0e-77
291.2
367
43.9
ENSG00000156502
Homo sapiens
8.8e-77
289.7
355
44.5
CM16G01410
Cyanidioschyzon merolae
5.2e-61
237.3
444
35.1
Cre06.g270900
Chlamydomonas reinhardtii
9.5e-47
189.9
581
26.2
AA0016G01420
Aureococcus anophagefferens
2.4e-29
132.1
288
33.7
sya00G127370
Synedra acus
5.6e-23
110.9
279
31.2
ps00G40990
Pseudo-nitzschia multiseries
2.3e-16
89.0
259
29.0
fso74700
Fistulifera solaris
3.7e-06
55.1
126
31.0
fso91130
Fistulifera solaris
3.7e-06
55.1
126
31.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing