Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho256100
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho256100
Thalassiosira oceanica
1.6e-155
550.1
275
100.0
CC00G47830
Cyclotella cryptica
1.7e-32
141.4
278
31.3
CC00G79300
Cyclotella cryptica
2.3e-32
141.0
275
31.6
tps192360
Thalassiosira pseudonana
1.2e-30
135.2
284
33.5
tho398340
Thalassiosira oceanica
4.1e-26
120.2
199
32.2
Sro1512_g278790
Seminavis robusta
6.6e-24
112.8
206
36.4
tho224000
Thalassiosira oceanica
2.5e-23
110.9
311
28.9
CC00G26170
Cyclotella cryptica
1.6e-22
108.2
273
29.3
CC00G124300
Cyclotella cryptica
4.7e-22
106.7
218
30.7
ptri229170
Phaeodactylum tricornutum
4.7e-22
106.7
197
31.5
sya00G53380
Synedra acus
6.2e-22
106.3
210
31.9
tps126430
Thalassiosira pseudonana
1.4e-21
105.1
213
31.9
gene6749
Fragilariopsis cylindrus
1.8e-21
104.8
177
32.8
fso11540
Fistulifera solaris
5.2e-21
103.2
213
30.0
Sro560_g166640
Seminavis robusta
8.9e-21
102.4
172
32.0
sya00G43360
Synedra acus
8.9e-21
102.4
246
30.5
tps64700
Thalassiosira pseudonana
1.5e-20
101.7
211
32.7
fso113910
Fistulifera solaris
2.0e-20
101.3
213
29.6
Sro299_g111270
Seminavis robusta
2.0e-20
101.3
207
32.4
fso33230
Fistulifera solaris
2.6e-20
100.9
168
34.5
Sro1228_g254370
Seminavis robusta
2.6e-20
100.9
191
30.9
CC00G136890
Cyclotella cryptica
4.4e-20
100.1
266
26.7
gene6405
Fragilariopsis cylindrus
4.4e-20
100.1
206
31.1
CC00G57010
Cyclotella cryptica
5.8e-20
99.8
168
34.5
Sro3210_g345280
Seminavis robusta
5.8e-20
99.8
215
30.7
PSNMU-V1.4_AUG-EV-PASAV3_0030110
Pseudo-nitzschia multistriata
9.8e-20
99.0
275
27.6
ps00G01920
Pseudo-nitzschia multiseries
2.2e-19
97.8
201
30.8
Sro672_g185130
Seminavis robusta
2.2e-19
97.8
166
34.9
ptri21090
Phaeodactylum tricornutum
3.7e-19
97.1
170
35.9
tps209500
Thalassiosira pseudonana
3.7e-19
97.1
254
28.7
CC00G152580
Cyclotella cryptica
1.1e-18
95.5
211
29.9
ps00G155910
Pseudo-nitzschia multiseries
1.9e-18
94.7
177
31.6
ptri211550
Phaeodactylum tricornutum
1.9e-18
94.7
210
30.0
tps64720
Thalassiosira pseudonana
1.9e-18
94.7
292
28.1
sya00G242440
Synedra acus
2.4e-18
94.4
204
33.3
tps45290
Thalassiosira pseudonana
2.4e-18
94.4
243
29.6
tps97340
Thalassiosira pseudonana
2.4e-18
94.4
187
33.7
Sro748_g196620
Seminavis robusta
9.2e-18
92.4
206
27.7
tps71590
Thalassiosira pseudonana
9.2e-18
92.4
168
32.1
Sro299_g111520
Seminavis robusta
1.2e-17
92.0
180
32.2
Sro975_g226830
Seminavis robusta
1.6e-17
91.7
170
34.1
CC00G13180
Cyclotella cryptica
2.1e-17
91.3
177
32.8
Sro458_g147090
Seminavis robusta
2.1e-17
91.3
164
34.8
tho196600
Thalassiosira oceanica
2.1e-17
91.3
168
33.3
Sro2349_g324350
Seminavis robusta
2.7e-17
90.9
203
29.1
Sro427_g140660
Seminavis robusta
2.7e-17
90.9
203
29.1
tps32140
Thalassiosira pseudonana
2.7e-17
90.9
219
29.7
fso62790
Fistulifera solaris
6.0e-17
89.7
191
29.3
tps31090
Thalassiosira pseudonana
7.8e-17
89.4
250
28.8
fso98040
Fistulifera solaris
1.0e-16
89.0
253
28.1
CC00G175600
Cyclotella cryptica
1.3e-16
88.6
238
27.3
gene9793
Fragilariopsis cylindrus
1.3e-16
88.6
174
30.5
ptri223660
Phaeodactylum tricornutum
1.3e-16
88.6
177
32.2
tho315300
Thalassiosira oceanica
1.7e-16
88.2
168
32.1
fso109690
Fistulifera solaris
2.3e-16
87.8
247
28.7
tho170540
Thalassiosira oceanica
2.3e-16
87.8
208
29.3
tho222020
Thalassiosira oceanica
3.0e-16
87.4
231
28.1
fso39760
Fistulifera solaris
6.6e-16
86.3
175
32.6
Sro1015_g231520
Seminavis robusta
8.6e-16
85.9
217
25.3
CC00G32860
Cyclotella cryptica
1.1e-15
85.5
168
32.7
tho435300
Thalassiosira oceanica
1.1e-15
85.5
148
34.5
tps31050
Thalassiosira pseudonana
1.1e-15
85.5
250
28.0
tps29450
Thalassiosira pseudonana
1.5e-15
85.1
191
29.8
ps00G96090
Pseudo-nitzschia multiseries
1.9e-15
84.7
172
30.2
Sro299_g111360
Seminavis robusta
1.9e-15
84.7
181
30.9
tho138240
Thalassiosira oceanica
2.5e-15
84.3
210
30.0
tps29390
Thalassiosira pseudonana
2.5e-15
84.3
240
27.9
sya00G230590
Synedra acus
3.3e-15
84.0
172
30.2
Sro1353_g265400
Seminavis robusta
4.3e-15
83.6
202
29.7
CC00G154580
Cyclotella cryptica
5.6e-15
83.2
172
30.2
tho377180
Thalassiosira oceanica
5.6e-15
83.2
215
27.4
tps29530
Thalassiosira pseudonana
7.3e-15
82.8
209
29.7
PSNMU-V1.4_AUG-EV-PASAV3_0074230
Pseudo-nitzschia multistriata
1.2e-14
82.0
229
29.7
tho61040
Thalassiosira oceanica
1.2e-14
82.0
215
27.9
CC00G51700
Cyclotella cryptica
1.6e-14
81.6
142
33.8
ps00G192350
Pseudo-nitzschia multiseries
1.6e-14
81.6
215
31.2
tho183840
Thalassiosira oceanica
2.1e-14
81.3
167
31.1
CC00G13870
Cyclotella cryptica
4.7e-14
80.1
196
26.5
fso180330
Fistulifera solaris
4.7e-14
80.1
201
29.9
gene13799
Fragilariopsis cylindrus
6.2e-14
79.7
137
29.2
fso15630
Fistulifera solaris
6.2e-14
79.7
208
29.3
Sro776_g200870
Seminavis robusta
6.2e-14
79.7
193
30.6
sya00G128810
Synedra acus
6.2e-14
79.7
179
29.6
fso195520
Fistulifera solaris
8.1e-14
79.3
195
28.7
tho246200
Thalassiosira oceanica
8.1e-14
79.3
173
30.6
tps29430
Thalassiosira pseudonana
8.1e-14
79.3
209
29.7
tps64680
Thalassiosira pseudonana
8.1e-14
79.3
231
28.1
Sro299_g111490
Seminavis robusta
1.1e-13
79.0
139
36.0
tps15140
Thalassiosira pseudonana
1.1e-13
79.0
237
27.4
AT5G43080
Arabidopsis thaliana
1.4e-13
78.6
177
30.5
sya00G256570
Synedra acus
2.3e-13
77.8
124
34.7
Sro299_g111340
Seminavis robusta
3.1e-13
77.4
260
24.6
Sro107_g054050
Seminavis robusta
4.0e-13
77.0
175
29.7
PSNMU-V1.4_AUG-EV-PASAV3_0095090
Pseudo-nitzschia multistriata
5.2e-13
76.6
171
30.4
ps00G83920
Pseudo-nitzschia multiseries
5.2e-13
76.6
203
27.6
CC00G196020
Cyclotella cryptica
6.8e-13
76.3
170
27.6
ps00G135050
Pseudo-nitzschia multiseries
6.8e-13
76.3
168
28.6
Sro1294_g260200
Seminavis robusta
6.8e-13
76.3
168
28.0
Sro251_g099220
Seminavis robusta
6.8e-13
76.3
177
24.9
Sro176_g077270
Seminavis robusta
8.9e-13
75.9
194
27.8
fso123550
Fistulifera solaris
1.2e-12
75.5
203
28.1
fso184930
Fistulifera solaris
1.2e-12
75.5
193
28.0
ptri10280
Phaeodactylum tricornutum
1.2e-12
75.5
163
33.1
sya00G264280
Synedra acus
1.2e-12
75.5
184
30.4
gene14534
Fragilariopsis cylindrus
1.5e-12
75.1
171
29.8
gene516
Fragilariopsis cylindrus
1.5e-12
75.1
171
29.8
ptri158990
Phaeodactylum tricornutum
1.5e-12
75.1
197
28.9
ptri226930
Phaeodactylum tricornutum
1.5e-12
75.1
202
28.7
Sro1087_g239840
Seminavis robusta
1.5e-12
75.1
162
29.6
tps170710
Thalassiosira pseudonana
1.5e-12
75.1
217
26.7
fso168420
Fistulifera solaris
2.0e-12
74.7
172
32.0
PSNMU-V1.4_AUG-EV-PASAV3_0005510
Pseudo-nitzschia multistriata
2.0e-12
74.7
164
31.1
ps00G174510
Pseudo-nitzschia multiseries
2.0e-12
74.7
173
29.5
tho20540
Thalassiosira oceanica
2.0e-12
74.7
160
29.4
tho412360
Thalassiosira oceanica
2.6e-12
74.3
145
30.3
gene10828
Fragilariopsis cylindrus
3.4e-12
73.9
167
27.5
tho592300
Thalassiosira oceanica
4.4e-12
73.6
173
27.7
tps150290
Thalassiosira pseudonana
4.4e-12
73.6
163
30.1
tps225440
Thalassiosira pseudonana
4.4e-12
73.6
158
29.1
CC00G26970
Cyclotella cryptica
5.8e-12
73.2
192
27.1
CC00G134640
Cyclotella cryptica
5.8e-12
73.2
169
30.8
ps00G185300
Pseudo-nitzschia multiseries
5.8e-12
73.2
164
30.5
Sro299_g111510
Seminavis robusta
7.5e-12
72.8
219
27.9
sya00G205170
Synedra acus
9.9e-12
72.4
159
30.8
fso151960
Fistulifera solaris
1.3e-11
72.0
172
30.8
Sro299_g111470
Seminavis robusta
1.3e-11
72.0
169
31.4
FBgn0010315
Drosophila melanogaster
1.7e-11
71.6
180
25.0
fso54280
Fistulifera solaris
1.7e-11
71.6
198
27.8
fso123570
Fistulifera solaris
2.2e-11
71.2
190
27.4
ptri223580
Phaeodactylum tricornutum
2.2e-11
71.2
202
26.2
sya00G204800
Synedra acus
2.2e-11
71.2
131
30.5
Sro756_g197840
Seminavis robusta
2.9e-11
70.9
165
27.3
tho314880
Thalassiosira oceanica
3.7e-11
70.5
182
28.0
CC00G09230
Cyclotella cryptica
6.4e-11
69.7
203
29.1
tps170450
Thalassiosira pseudonana
6.4e-11
69.7
275
25.8
sya00G242410
Synedra acus
8.3e-11
69.3
131
34.4
AA0008G00810
Aureococcus anophagefferens
2.4e-10
67.8
180
30.6
tho159540
Thalassiosira oceanica
2.4e-10
67.8
172
26.2
gene3187
Fragilariopsis cylindrus
3.2e-10
67.4
123
35.0
fso90480
Fistulifera solaris
4.1e-10
67.0
203
25.6
ps00G78480
Pseudo-nitzschia multiseries
4.1e-10
67.0
144
31.9
sya00G117100
Synedra acus
5.4e-10
66.6
127
32.3
CC00G113840
Cyclotella cryptica
7.1e-10
66.2
160
31.2
Pp3c1_38770
Physcomitrella patens
7.1e-10
66.2
188
25.0
sya00G242400
Synedra acus
9.2e-10
65.9
121
31.4
tps76060
Thalassiosira pseudonana
9.2e-10
65.9
119
32.8
tps211660
Thalassiosira pseudonana
9.2e-10
65.9
115
31.3
gene5301
Fragilariopsis cylindrus
1.2e-09
65.5
108
34.3
AT5G11300
Arabidopsis thaliana
2.1e-09
64.7
188
25.0
Pp3c1_39120
Physcomitrella patens
2.1e-09
64.7
226
23.5
Pp3c1_39040
Physcomitrella patens
2.1e-09
64.7
226
23.5
fso181370
Fistulifera solaris
2.7e-09
64.3
171
28.1
tps144100
Thalassiosira pseudonana
2.7e-09
64.3
124
30.6
fso125600
Fistulifera solaris
6.0e-09
63.2
205
24.9
fso182460
Fistulifera solaris
6.0e-09
63.2
126
30.2
ENSG00000175305
Homo sapiens
6.0e-09
63.2
124
29.0
PSNMU-V1.4_AUG-EV-PASAV3_0062130
Pseudo-nitzschia multistriata
6.0e-09
63.2
111
33.3
Sro781_g201590
Seminavis robusta
6.0e-09
63.2
166
27.7
tho191880
Thalassiosira oceanica
7.8e-09
62.8
142
31.7
fso184970
Fistulifera solaris
1.0e-08
62.4
236
25.0
AA0009G02010
Aureococcus anophagefferens
1.7e-08
61.6
189
28.0
FBgn0010382
Drosophila melanogaster
1.7e-08
61.6
157
24.8
tps120810
Thalassiosira pseudonana
1.7e-08
61.6
165
23.0
ps00G117540
Pseudo-nitzschia multiseries
5.1e-08
60.1
155
25.8
pte372810
Paramecium tetraurelia
5.1e-08
60.1
197
23.4
fso180370
Fistulifera solaris
8.6e-08
59.3
236
24.6
pte678410
Paramecium tetraurelia
8.6e-08
59.3
132
26.5
CC00G96200
Cyclotella cryptica
1.1e-07
58.9
127
26.8
ENSG00000105173
Homo sapiens
1.1e-07
58.9
109
28.4
ps00G185530
Pseudo-nitzschia multiseries
1.1e-07
58.9
109
28.4
Sro2055_g312830
Seminavis robusta
1.1e-07
58.9
217
26.7
tho86780
Thalassiosira oceanica
1.5e-07
58.5
158
28.5
ps00G57180
Pseudo-nitzschia multiseries
1.9e-07
58.2
65
43.1
tho60340
Thalassiosira oceanica
1.9e-07
58.2
146
32.2
Sro555_g165810
Seminavis robusta
2.5e-07
57.8
180
25.0
tps216790
Thalassiosira pseudonana
2.5e-07
57.8
163
25.2
Ec-01_000740
Ectocarpus siliculosus
3.3e-07
57.4
157
29.9
pte252790
Paramecium tetraurelia
3.3e-07
57.4
122
29.5
pte688730
Paramecium tetraurelia
3.3e-07
57.4
122
28.7
tho102120
Thalassiosira oceanica
3.3e-07
57.4
100
31.0
pte118950
Paramecium tetraurelia
4.3e-07
57.0
157
25.5
SPBC582.03
Schizosaccharomyces pombe
4.3e-07
57.0
143
25.9
SPAPB2B4.03
Schizosaccharomyces pombe
5.6e-07
56.6
135
28.1
SPCC4E9.02
Schizosaccharomyces pombe
5.6e-07
56.6
134
27.6
tps15100
Thalassiosira pseudonana
5.6e-07
56.6
242
22.7
tps106360
Thalassiosira pseudonana
5.6e-07
56.6
115
33.0
AT4G37490
Arabidopsis thaliana
9.5e-07
55.8
231
23.4
pte52610
Paramecium tetraurelia
9.5e-07
55.8
157
25.5
FBgn0015625
Drosophila melanogaster
1.2e-06
55.5
204
25.0
ENSG00000147082
Homo sapiens
2.1e-06
54.7
175
26.9
PSNMU-V1.4_AUG-EV-PASAV3_0042380
Pseudo-nitzschia multistriata
2.1e-06
54.7
116
28.4
ps00G139740
Pseudo-nitzschia multiseries
2.1e-06
54.7
171
23.4
pte365820
Paramecium tetraurelia
2.1e-06
54.7
108
25.0
gene17617
Fragilariopsis cylindrus
2.8e-06
54.3
131
26.0
WBGene00000871
Caenorhabditis elegans
3.6e-06
53.9
148
23.0
Naga_100139g11
Nannochloropsis gaditana
3.6e-06
53.9
105
27.6
CC00G122630
Cyclotella cryptica
4.7e-06
53.5
121
27.3
gene1461
Fragilariopsis cylindrus
4.7e-06
53.5
155
26.5
pte429170
Paramecium tetraurelia
4.7e-06
53.5
157
24.8
pte760840
Paramecium tetraurelia
4.7e-06
53.5
121
28.1
pte443710
Paramecium tetraurelia
6.2e-06
53.1
122
27.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (8 genes)
Thalassiosira pseudonana (28 genes)
Thalassiosira oceanica (22 genes)
Pseudo-nitzschia multiseries (13 genes)
Fistulifera solaris (22 genes)
Fragilariopsis cylindrus (11 genes)
Cyclotella cryptica (20 genes)
Aureococcus anophagefferens (2 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (10 genes)
Seminavis robusta (29 genes)
Synedra acus (12 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (6 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing