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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
tho188920
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
tho188920
Thalassiosira oceanica
0.0e+00
1607.0
801
100.0
CC00G152620
Cyclotella cryptica
4.9e-152
540.0
816
42.3
tps95060
Thalassiosira pseudonana
3.4e-105
384.4
533
43.5
ptri203570
Phaeodactylum tricornutum
1.0e-96
356.3
699
35.3
fso107100
Fistulifera solaris
9.3e-87
323.2
698
34.2
fso194100
Fistulifera solaris
1.6e-86
322.4
745
32.8
ps00G138400
Pseudo-nitzschia multiseries
4.2e-79
297.7
694
31.4
Sro263_g102160
Seminavis robusta
5.7e-76
287.3
770
30.8
gene20503
Fragilariopsis cylindrus
3.8e-56
221.5
217
50.2
Naga_100001g24
Nannochloropsis gaditana
5.2e-37
157.9
486
30.5
ENSG00000114388
Homo sapiens
1.3e-24
116.7
242
30.6
FBgn0030800
Drosophila melanogaster
2.5e-23
112.5
221
31.7
SPAC23H3.03c
Schizosaccharomyces pombe
3.4e-20
102.1
450
22.9
Ec-13_002960
Ectocarpus siliculosus
1.1e-10
70.5
219
26.5
gsu134080
Galdieria sulphuraria
9.2e-10
67.4
253
25.7
WBGene00018635
Caenorhabditis elegans
3.3e-07
58.9
186
26.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (0 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (0 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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