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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G80760
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G80760
Synedra acus
7.3e-160
564.7
318
100.0
sya00G186490
Synedra acus
6.4e-47
189.5
335
39.1
sya00G135030
Synedra acus
3.9e-44
180.3
348
37.6
sya00G210060
Synedra acus
8.6e-44
179.1
319
42.3
sya00G133410
Synedra acus
3.3e-43
177.2
348
37.1
sya00G132040
Synedra acus
9.6e-43
175.6
346
37.3
sya00G15860
Synedra acus
1.1e-41
172.2
377
40.3
sya00G103770
Synedra acus
2.3e-36
154.5
140
58.6
sya00G236290
Synedra acus
2.3e-36
154.5
337
33.2
sya00G165310
Synedra acus
1.9e-35
151.4
262
39.7
sya00G188070
Synedra acus
1.3e-34
148.7
279
37.6
sya00G119560
Synedra acus
7.9e-29
129.4
331
32.9
sya00G167910
Synedra acus
7.4e-27
122.9
80
70.0
sya00G101820
Synedra acus
7.9e-21
102.8
278
38.1
sya00G156760
Synedra acus
3.0e-20
100.9
228
39.9
sya00G113700
Synedra acus
1.5e-19
98.6
114
53.5
sya00G230040
Synedra acus
2.4e-17
91.3
117
43.6
sya00G153250
Synedra acus
5.3e-17
90.1
114
47.4
sya00G174760
Synedra acus
1.5e-16
88.6
49
79.6
sya00G75670
Synedra acus
2.0e-16
88.2
101
54.5
sya00G169270
Synedra acus
3.4e-16
87.4
263
31.9
sya00G228420
Synedra acus
4.5e-16
87.0
144
38.2
sya00G20400
Synedra acus
7.6e-16
86.3
91
48.4
CC00G79940
Cyclotella cryptica
1.3e-15
85.5
75
54.7
sya00G58260
Synedra acus
2.2e-15
84.7
105
46.7
sya00G169930
Synedra acus
2.9e-15
84.3
91
47.3
sya00G45780
Synedra acus
3.8e-15
84.0
125
39.2
sya00G124480
Synedra acus
3.8e-15
84.0
89
47.2
sya00G251420
Synedra acus
1.1e-14
82.4
114
43.0
sya00G42170
Synedra acus
1.9e-14
81.6
76
53.9
sya00G74320
Synedra acus
1.9e-14
81.6
80
51.2
sya00G76750
Synedra acus
1.9e-14
81.6
80
51.2
sya00G206420
Synedra acus
1.9e-14
81.6
133
37.6
fso21490
Fistulifera solaris
2.5e-14
81.3
334
24.9
sya00G256430
Synedra acus
2.5e-14
81.3
124
41.1
sya00G62600
Synedra acus
3.2e-14
80.9
76
50.0
sya00G236140
Synedra acus
3.2e-14
80.9
76
48.7
sya00G183670
Synedra acus
7.1e-14
79.7
118
39.0
sya00G261160
Synedra acus
7.1e-14
79.7
75
49.3
sya00G256620
Synedra acus
9.3e-14
79.3
114
40.4
CC00G27860
Cyclotella cryptica
1.2e-13
79.0
73
53.4
CC00G171140
Cyclotella cryptica
1.2e-13
79.0
105
41.0
sya00G11470
Synedra acus
1.2e-13
79.0
92
47.8
sya00G109280
Synedra acus
1.2e-13
79.0
80
47.5
sya00G213030
Synedra acus
1.2e-13
79.0
80
47.5
sya00G234880
Synedra acus
1.2e-13
79.0
141
33.3
sya00G07560
Synedra acus
2.1e-13
78.2
76
47.4
sya00G96210
Synedra acus
2.1e-13
78.2
92
46.7
sya00G96250
Synedra acus
2.1e-13
78.2
92
46.7
sya00G249520
Synedra acus
2.7e-13
77.8
76
47.4
PSNMU-V1.4_AUG-EV-PASAV3_0053460
Pseudo-nitzschia multistriata
3.5e-13
77.4
77
50.6
sya00G16890
Synedra acus
4.6e-13
77.0
318
26.7
sya00G231330
Synedra acus
4.6e-13
77.0
328
26.8
CC00G169820
Cyclotella cryptica
6.0e-13
76.6
102
42.2
sya00G30520
Synedra acus
7.9e-13
76.3
48
68.8
CC00G68020
Cyclotella cryptica
1.0e-12
75.9
135
37.8
CC00G103300
Cyclotella cryptica
1.3e-12
75.5
76
48.7
sya00G50720
Synedra acus
1.8e-12
75.1
154
38.3
sya00G72280
Synedra acus
1.8e-12
75.1
126
39.7
CC00G125990
Cyclotella cryptica
3.0e-12
74.3
76
47.4
CC00G193540
Cyclotella cryptica
3.0e-12
74.3
107
41.1
CC00G130220
Cyclotella cryptica
3.9e-12
73.9
73
47.9
CC00G177430
Cyclotella cryptica
3.9e-12
73.9
88
45.5
sya00G88730
Synedra acus
5.1e-12
73.6
319
24.8
sya00G89520
Synedra acus
5.1e-12
73.6
68
51.5
CC00G209510
Cyclotella cryptica
8.7e-12
72.8
78
48.7
CC00G117070
Cyclotella cryptica
1.1e-11
72.4
75
46.7
fso112160
Fistulifera solaris
1.1e-11
72.4
97
39.2
sya00G67850
Synedra acus
1.5e-11
72.0
117
36.8
sya00G111990
Synedra acus
1.5e-11
72.0
76
44.7
sya00G02010
Synedra acus
1.9e-11
71.6
75
46.7
CC00G118060
Cyclotella cryptica
2.5e-11
71.2
88
43.2
fso159750
Fistulifera solaris
2.5e-11
71.2
79
50.6
sya00G232410
Synedra acus
2.5e-11
71.2
69
53.6
sya00G133110
Synedra acus
3.3e-11
70.9
316
26.6
CC00G143740
Cyclotella cryptica
4.3e-11
70.5
86
43.0
Sro2166_g317260
Seminavis robusta
4.3e-11
70.5
151
33.8
CC00G57070
Cyclotella cryptica
5.7e-11
70.1
76
47.4
CC00G143610
Cyclotella cryptica
5.7e-11
70.1
86
45.3
CC00G150720
Cyclotella cryptica
9.6e-11
69.3
95
38.9
CC00G17990
Cyclotella cryptica
1.3e-10
68.9
75
44.0
gene11370
Fragilariopsis cylindrus
1.3e-10
68.9
84
40.5
PSNMU-V1.4_AUG-EV-PASAV3_0071490
Pseudo-nitzschia multistriata
1.3e-10
68.9
83
44.6
fso102290
Fistulifera solaris
1.6e-10
68.6
79
48.1
sya00G115070
Synedra acus
1.6e-10
68.6
92
39.1
sya00G177350
Synedra acus
2.1e-10
68.2
79
41.8
sya00G23970
Synedra acus
3.7e-10
67.4
45
68.9
sya00G114720
Synedra acus
3.7e-10
67.4
92
37.0
CC00G54730
Cyclotella cryptica
4.8e-10
67.0
95
36.8
fso160210
Fistulifera solaris
4.8e-10
67.0
127
31.5
sya00G106280
Synedra acus
4.8e-10
67.0
131
32.1
CC00G78130
Cyclotella cryptica
6.3e-10
66.6
76
44.7
sya00G59210
Synedra acus
6.3e-10
66.6
317
26.8
sya00G158420
Synedra acus
6.3e-10
66.6
112
35.7
tho37120
Thalassiosira oceanica
8.2e-10
66.2
90
40.0
tho393500
Thalassiosira oceanica
8.2e-10
66.2
79
43.0
gene11114
Fragilariopsis cylindrus
1.1e-09
65.9
79
41.8
ps00G08940
Pseudo-nitzschia multiseries
1.1e-09
65.9
80
43.8
sya00G118800
Synedra acus
1.1e-09
65.9
72
43.1
sya00G04370
Synedra acus
1.4e-09
65.5
110
33.6
fso105830
Fistulifera solaris
1.8e-09
65.1
87
44.8
sya00G113090
Synedra acus
1.8e-09
65.1
79
44.3
tho72160
Thalassiosira oceanica
1.8e-09
65.1
93
37.6
sya00G123220
Synedra acus
2.4e-09
64.7
79
43.0
sya00G234710
Synedra acus
3.1e-09
64.3
56
57.1
PSNMU-V1.4_AUG-EV-PASAV3_0061400
Pseudo-nitzschia multistriata
4.1e-09
63.9
81
44.4
sya00G49610
Synedra acus
4.1e-09
63.9
79
43.0
ps00G179050
Pseudo-nitzschia multiseries
9.0e-09
62.8
83
39.8
sya00G60460
Synedra acus
9.0e-09
62.8
55
56.4
gene14612
Fragilariopsis cylindrus
1.2e-08
62.4
84
40.5
gene12844
Fragilariopsis cylindrus
1.5e-08
62.0
110
35.5
ps00G09640
Pseudo-nitzschia multiseries
1.5e-08
62.0
141
35.5
sya00G116930
Synedra acus
1.5e-08
62.0
68
39.7
sya00G176430
Synedra acus
1.5e-08
62.0
97
37.1
sya00G239490
Synedra acus
1.5e-08
62.0
79
36.7
PSNMU-V1.4_AUG-EV-PASAV3_0055470
Pseudo-nitzschia multistriata
2.0e-08
61.6
79
43.0
sya00G176820
Synedra acus
2.0e-08
61.6
79
41.8
CC00G51430
Cyclotella cryptica
2.6e-08
61.2
95
34.7
sya00G213810
Synedra acus
2.6e-08
61.2
123
33.3
gene1104
Fragilariopsis cylindrus
3.4e-08
60.8
79
39.2
sya00G106110
Synedra acus
3.4e-08
60.8
56
50.0
gene11458
Fragilariopsis cylindrus
4.5e-08
60.5
79
40.5
sya00G119770
Synedra acus
5.9e-08
60.1
50
52.0
sya00G06420
Synedra acus
7.6e-08
59.7
79
41.8
sya00G37690
Synedra acus
7.6e-08
59.7
52
55.8
sya00G61270
Synedra acus
7.6e-08
59.7
228
24.1
sya00G82960
Synedra acus
7.6e-08
59.7
55
52.7
sya00G136860
Synedra acus
7.6e-08
59.7
76
40.8
ps00G187830
Pseudo-nitzschia multiseries
1.0e-07
59.3
58
51.7
sya00G264800
Synedra acus
1.0e-07
59.3
56
48.2
tho55180
Thalassiosira oceanica
1.3e-07
58.9
79
41.8
tho273200
Thalassiosira oceanica
1.3e-07
58.9
79
41.8
fso122320
Fistulifera solaris
1.7e-07
58.5
79
41.8
PSNMU-V1.4_AUG-EV-PASAV3_0039690
Pseudo-nitzschia multistriata
1.7e-07
58.5
79
40.5
sya00G241890
Synedra acus
1.7e-07
58.5
36
66.7
ps00G35390
Pseudo-nitzschia multiseries
2.2e-07
58.2
77
40.3
tho53680
Thalassiosira oceanica
2.2e-07
58.2
74
41.9
sya00G13470
Synedra acus
5.0e-07
57.0
76
38.2
sya00G29690
Synedra acus
5.0e-07
57.0
76
38.2
sya00G29700
Synedra acus
5.0e-07
57.0
76
38.2
PSNMU-V1.4_AUG-EV-PASAV3_0065300
Pseudo-nitzschia multistriata
6.5e-07
56.6
343
30.0
sya00G145710
Synedra acus
8.5e-07
56.2
79
49.4
sya00G51080
Synedra acus
1.4e-06
55.5
61
45.9
fso63240
Fistulifera solaris
1.9e-06
55.1
133
31.6
ps00G185810
Pseudo-nitzschia multiseries
1.9e-06
55.1
83
38.6
sya00G08500
Synedra acus
1.9e-06
55.1
92
37.0
CC00G200330
Cyclotella cryptica
2.5e-06
54.7
52
50.0
ps00G14290
Pseudo-nitzschia multiseries
2.5e-06
54.7
83
38.6
ps00G168530
Pseudo-nitzschia multiseries
2.5e-06
54.7
82
36.6
ps00G170930
Pseudo-nitzschia multiseries
2.5e-06
54.7
74
47.3
sya00G04380
Synedra acus
2.5e-06
54.7
36
63.9
tho161160
Thalassiosira oceanica
2.5e-06
54.7
79
36.7
tho288900
Thalassiosira oceanica
2.5e-06
54.7
79
36.7
gene9655
Fragilariopsis cylindrus
3.2e-06
54.3
103
32.0
gene3930
Fragilariopsis cylindrus
3.2e-06
54.3
103
32.0
fso85840
Fistulifera solaris
4.2e-06
53.9
140
30.7
fso109400
Fistulifera solaris
4.2e-06
53.9
94
39.4
sya00G238340
Synedra acus
4.2e-06
53.9
125
30.4
gene3656
Fragilariopsis cylindrus
5.5e-06
53.5
103
32.0
gene12181
Fragilariopsis cylindrus
7.2e-06
53.1
103
31.1
gene7582
Fragilariopsis cylindrus
7.2e-06
53.1
101
30.7
fso186580
Fistulifera solaris
7.2e-06
53.1
56
48.2
sya00G205080
Synedra acus
7.2e-06
53.1
53
45.3
sya00G261860
Synedra acus
9.3e-06
52.8
148
26.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (0 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (8 genes)
Pseudo-nitzschia multiseries (9 genes)
Fistulifera solaris (11 genes)
Fragilariopsis cylindrus (11 genes)
Cyclotella cryptica (22 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (0 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (0 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (0 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (96 genes)
Physcomitrella patens (0 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (6 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing