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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G73720
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G73720
Synedra acus
0.0e+00
2122.1
1097
100.0
ps00G06430
Pseudo-nitzschia multiseries
6.3e-134
480.3
922
34.2
PSNMU-V1.4_AUG-EV-PASAV3_0118550
Pseudo-nitzschia multistriata
6.9e-133
476.9
988
33.2
gene13733
Fragilariopsis cylindrus
1.8e-120
435.6
718
35.5
fso119530
Fistulifera solaris
6.1e-113
410.6
1041
30.6
ptri91750
Phaeodactylum tricornutum
1.8e-112
409.1
948
31.4
fso30500
Fistulifera solaris
1.3e-107
392.9
1068
29.3
Sro50_g029000
Seminavis robusta
8.5e-99
363.6
1023
29.7
CC00G57600
Cyclotella cryptica
3.2e-98
361.7
1003
27.9
tps159260
Thalassiosira pseudonana
1.2e-92
343.2
690
31.9
ENSG00000130640
Homo sapiens
3.9e-67
258.5
716
27.8
Pp3c23_1190
Physcomitrella patens
6.6e-59
231.1
593
28.2
Naga_100001g52
Nannochloropsis gaditana
2.0e-55
219.5
804
26.1
Pp3c8_20000
Physcomitrella patens
2.0e-55
219.5
624
27.6
AT5G17410
Arabidopsis thaliana
2.2e-54
216.1
607
27.2
Pp3c13_20568
Physcomitrella patens
4.2e-53
211.8
595
27.2
Pp3c13_20560
Physcomitrella patens
4.2e-53
211.8
595
27.2
gsu84670
Galdieria sulphuraria
6.6e-51
204.5
630
28.3
FBgn0026430
Drosophila melanogaster
2.1e-49
199.5
591
27.2
SPBC365.15
Schizosaccharomyces pombe
1.2e-44
183.7
673
25.0
pte710980
Paramecium tetraurelia
8.7e-35
151.0
622
23.0
Ec-20_003880
Ectocarpus siliculosus
1.2e-28
130.6
334
28.7
gsu85750
Galdieria sulphuraria
1.6e-28
130.2
577
22.9
ENSG00000126216
Homo sapiens
4.6e-28
128.6
564
22.9
AT5G06680
Arabidopsis thaliana
8.7e-27
124.4
526
25.1
Ec-20_003870
Ectocarpus siliculosus
9.6e-26
120.9
381
27.6
Pp3c20_16750
Physcomitrella patens
4.0e-24
115.5
573
23.0
pte73500
Paramecium tetraurelia
2.0e-23
113.2
613
23.3
ps00G07860
Pseudo-nitzschia multiseries
3.4e-23
112.5
542
23.1
pte344330
Paramecium tetraurelia
5.8e-23
111.7
566
23.9
pte263930
Paramecium tetraurelia
7.6e-23
111.3
546
22.3
Pp3c24_16220
Physcomitrella patens
1.0e-22
110.9
511
23.9
pte316560
Paramecium tetraurelia
1.9e-21
106.7
543
21.7
ptri173770
Phaeodactylum tricornutum
2.7e-20
102.8
514
22.8
fso116280
Fistulifera solaris
7.4e-18
94.7
505
23.2
PSNMU-V1.4_AUG-EV-PASAV3_0101270
Pseudo-nitzschia multistriata
2.8e-17
92.8
508
22.4
gene13257
Fragilariopsis cylindrus
4.8e-17
92.0
512
22.1
SPBC428.20c
Schizosaccharomyces pombe
4.8e-17
92.0
482
22.2
fso25450
Fistulifera solaris
8.2e-17
91.3
506
23.3
emh763790
Emiliania huxleyi
3.1e-16
89.4
496
24.8
Naga_100060g14
Nannochloropsis gaditana
6.9e-16
88.2
478
22.6
tps174470
Thalassiosira pseudonana
1.7e-14
83.6
706
20.3
Cre11.g467745
Chlamydomonas reinhardtii
2.2e-14
83.2
573
21.6
FBgn0001612
Drosophila melanogaster
2.9e-14
82.8
527
20.7
ENSG00000137822
Homo sapiens
1.1e-13
80.9
629
19.4
Cre12.g525500
Chlamydomonas reinhardtii
1.0e-11
74.3
283
24.7
Pp3c14_20420
Physcomitrella patens
6.3e-09
65.1
528
20.3
Ec-01_012030
Ectocarpus siliculosus
1.5e-07
60.5
347
21.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (1 genes)
Synedra acus (1 genes)
Physcomitrella patens (7 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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