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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G61890
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G61890
Synedra acus
0.0e+00
1651.0
819
100.0
sya00G144450
Synedra acus
0.0e+00
1439.1
819
88.8
ptri97370
Phaeodactylum tricornutum
8.1e-195
682.2
871
46.4
ps00G39060
Pseudo-nitzschia multiseries
1.2e-182
641.7
869
45.2
fso117180
Fistulifera solaris
7.4e-180
632.5
838
44.7
fso50450
Fistulifera solaris
1.1e-178
628.6
836
45.1
tps205130
Thalassiosira pseudonana
6.3e-163
576.2
896
41.5
Sro397_g134430
Seminavis robusta
4.5e-161
570.1
852
40.7
Sro397_g134410
Seminavis robusta
4.5e-161
570.1
852
40.7
CC00G17000
Cyclotella cryptica
1.8e-157
558.1
915
40.0
tho145400
Thalassiosira oceanica
4.4e-148
526.9
866
40.6
gene6541
Fragilariopsis cylindrus
1.3e-91
339.3
280
64.3
Naga_100023g38
Nannochloropsis gaditana
1.6e-33
146.4
191
41.9
Ec-21_002440
Ectocarpus siliculosus
4.2e-26
121.7
249
33.7
PSNMU-V1.4_AUG-EV-PASAV3_0044840
Pseudo-nitzschia multistriata
1.0e-19
100.5
209
31.6
ptri25880
Phaeodactylum tricornutum
3.8e-19
98.6
125
40.8
tps162180
Thalassiosira pseudonana
6.5e-19
97.8
157
38.9
fso22080
Fistulifera solaris
8.5e-19
97.4
160
35.6
fso131290
Fistulifera solaris
8.5e-19
97.4
160
36.2
ENSG00000159459
Homo sapiens
1.2e-17
93.6
180
30.6
CC00G109250
Cyclotella cryptica
2.1e-17
92.8
157
36.9
sya00G39620
Synedra acus
6.1e-17
91.3
157
36.9
WBGene00016326
Caenorhabditis elegans
1.0e-16
90.5
161
32.3
Sro430_g141370
Seminavis robusta
1.4e-16
90.1
125
40.0
tho249240
Thalassiosira oceanica
1.8e-16
89.7
157
36.3
ENSG00000024048
Homo sapiens
3.0e-16
89.0
162
30.9
Naga_100073g7
Nannochloropsis gaditana
2.0e-15
86.3
84
51.2
Ec-11_002810
Ectocarpus siliculosus
3.4e-15
85.5
105
41.9
ps00G146700
Pseudo-nitzschia multiseries
7.5e-15
84.3
97
43.3
Sro1087_g239810
Seminavis robusta
2.8e-14
82.4
170
30.0
FBgn0030809
Drosophila melanogaster
1.4e-13
80.1
160
27.5
Pp3c9_4700
Physcomitrella patens
1.4e-13
80.1
192
30.2
emh641100
Emiliania huxleyi
1.2e-12
77.0
171
31.0
Pp3c17_2850
Physcomitrella patens
2.7e-12
75.9
118
33.9
ccr96920
Chondrus crispus
1.0e-11
73.9
155
30.3
Pp3c10_20380
Physcomitrella patens
1.7e-11
73.2
93
43.0
Pp3c3_37220
Physcomitrella patens
2.2e-11
72.8
139
35.3
Pp3c15_3560
Physcomitrella patens
3.8e-11
72.0
99
35.4
ENSG00000144357
Homo sapiens
6.5e-11
71.2
100
34.0
SPBC19C7.02
Schizosaccharomyces pombe
8.5e-11
70.9
111
32.4
SPAC15A10.11
Schizosaccharomyces pombe
5.5e-10
68.2
124
35.5
Pp3c3_24510
Physcomitrella patens
7.2e-10
67.8
130
34.6
Cre02.g089237
Chlamydomonas reinhardtii
4.7e-09
65.1
143
31.5
Pp3c8_2940
Physcomitrella patens
4.7e-09
65.1
139
29.5
Pp3c8_2930
Physcomitrella patens
4.7e-09
65.1
139
29.5
AT5G02310
Arabidopsis thaliana
6.1e-09
64.7
115
35.7
WBGene00017373
Caenorhabditis elegans
3.4e-07
58.9
162
27.2
Pp3c2_29090
Physcomitrella patens
5.7e-07
58.2
91
33.0
emh485450
Emiliania huxleyi
1.3e-06
57.0
136
29.4
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (2 genes)
Thalassiosira pseudonana (2 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (2 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (0 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (0 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (4 genes)
Synedra acus (3 genes)
Physcomitrella patens (9 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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