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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G28520
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G28520
Synedra acus
1.8e-243
842.8
412
100.0
sya00G268230
Synedra acus
6.0e-239
827.8
410
98.3
fso108510
Fistulifera solaris
3.5e-114
413.3
427
51.1
ptri175640
Phaeodactylum tricornutum
1.4e-110
401.4
457
48.8
Sro362_g126690
Seminavis robusta
2.2e-108
394.0
490
45.7
CC00G62930
Cyclotella cryptica
3.5e-106
386.7
463
49.0
CC00G107720
Cyclotella cryptica
3.5e-106
386.7
463
49.0
PSNMU-V1.4_AUG-EV-PASAV3_0011990
Pseudo-nitzschia multistriata
6.0e-98
359.4
494
44.3
tho20080
Thalassiosira oceanica
2.5e-96
354.0
494
44.1
tps117800
Thalassiosira pseudonana
1.1e-91
338.6
324
54.3
ps00G26890
Pseudo-nitzschia multiseries
7.2e-91
335.9
335
53.4
gene4397
Fragilariopsis cylindrus
2.0e-88
327.8
260
59.2
fso50800
Fistulifera solaris
3.7e-87
323.6
427
43.1
gene16231
Fragilariopsis cylindrus
2.6e-85
317.4
245
60.8
AA0008G00470
Aureococcus anophagefferens
9.4e-59
229.2
323
42.1
AT5G14600
Arabidopsis thaliana
9.4e-59
229.2
318
40.9
Cre05.g244236
Chlamydomonas reinhardtii
8.0e-58
226.1
264
44.3
Naga_100009g97
Nannochloropsis gaditana
1.8e-57
224.9
389
38.6
Pp3c18_5220
Physcomitrella patens
4.0e-57
223.8
329
39.8
FBgn0039407
Drosophila melanogaster
5.9e-53
209.9
340
37.1
ccr128640
Chondrus crispus
2.3e-52
208.0
343
37.0
ENSG00000166166
Homo sapiens
8.3e-47
189.5
318
38.4
YJL125C
Saccharomyces cerevisiae strain S288C
1.3e-44
182.2
367
34.6
SPAC9G1.12
Schizosaccharomyces pombe
7.3e-43
176.4
357
33.9
WBGene00012192
Caenorhabditis elegans
6.1e-42
173.3
248
38.3
pte791430
Paramecium tetraurelia
2.2e-39
164.9
253
37.5
gsu16750
Galdieria sulphuraria
1.5e-35
152.1
339
31.9
emh364140
Emiliania huxleyi
2.7e-29
131.3
126
48.4
gsu11060
Galdieria sulphuraria
1.0e-28
129.4
337
29.1
emh34150
Emiliania huxleyi
1.8e-25
118.6
106
52.8
CM02G01250
Cyanidioschyzon merolae
1.0e-20
102.8
241
31.5
ENSG00000171103
Homo sapiens
1.2e-08
62.8
297
23.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (2 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (1 genes)
Chlamydomonas reinhardtii (1 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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