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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G252680
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G252680
Synedra acus
0.0e+00
1189.1
590
100.0
Sro556_g165920
Seminavis robusta
1.1e-105
385.6
568
42.4
fso43860
Fistulifera solaris
9.9e-94
345.9
606
38.0
fso64850
Fistulifera solaris
1.6e-91
338.6
601
37.9
ptri207540
Phaeodactylum tricornutum
4.6e-91
337.0
485
39.6
ps00G173860
Pseudo-nitzschia multiseries
9.6e-73
276.2
521
36.7
PSNMU-V1.4_AUG-EV-PASAV3_0099850
Pseudo-nitzschia multistriata
1.7e-69
265.4
687
32.8
gsu33630
Galdieria sulphuraria
8.3e-32
140.2
341
30.5
Cre03.g148050
Chlamydomonas reinhardtii
2.3e-26
122.1
518
25.3
FBgn0037554
Drosophila melanogaster
1.2e-25
119.8
477
25.8
ccr169420
Chondrus crispus
2.2e-24
115.5
383
28.2
emh530300
Emiliania huxleyi
2.8e-24
115.2
367
27.0
emh67860
Emiliania huxleyi
2.8e-24
115.2
367
27.0
ENSG00000101751
Homo sapiens
6.3e-24
114.0
261
28.4
FBgn0037141
Drosophila melanogaster
1.5e-20
102.8
274
28.5
CM01G00620
Cyanidioschyzon merolae
1.6e-19
99.4
261
26.8
AA0002G04000
Aureococcus anophagefferens
1.0e-18
96.7
220
30.0
Pp3c14_23660
Physcomitrella patens
2.3e-18
95.5
275
28.0
Ec-01_006080
Ectocarpus siliculosus
9.8e-17
90.1
271
29.5
AT5G44740
Arabidopsis thaliana
1.7e-16
89.4
278
25.9
pte531460
Paramecium tetraurelia
8.3e-16
87.0
282
26.2
pte645160
Paramecium tetraurelia
1.4e-15
86.3
395
22.5
ENSG00000170734
Homo sapiens
3.2e-15
85.1
324
23.8
AT1G49980
Arabidopsis thaliana
7.0e-15
84.0
286
24.8
Pp3c8_17250
Physcomitrella patens
7.0e-15
84.0
271
25.8
sya00G252360
Synedra acus
7.0e-15
84.0
396
23.7
pte538790
Paramecium tetraurelia
1.2e-14
83.2
310
25.5
gsu07230
Galdieria sulphuraria
2.0e-14
82.4
313
25.2
emh540590
Emiliania huxleyi
4.6e-14
81.3
281
26.7
ENSG00000122008
Homo sapiens
5.9e-14
80.9
287
24.0
emh117440
Emiliania huxleyi
7.8e-14
80.5
89
47.2
fso02980
Fistulifera solaris
7.8e-14
80.5
635
22.0
WBGene00017696
Caenorhabditis elegans
1.3e-13
79.7
258
26.4
Naga_100321g4
Nannochloropsis gaditana
5.0e-13
77.8
285
27.0
Sro492_g153880
Seminavis robusta
1.1e-12
76.6
589
21.6
Cre02.g079850
Chlamydomonas reinhardtii
3.3e-12
75.1
266
24.1
WBGene00018721
Caenorhabditis elegans
4.3e-12
74.7
264
22.7
gsu71910
Galdieria sulphuraria
4.3e-12
74.7
274
24.8
SPCC553.07c
Schizosaccharomyces pombe
5.6e-12
74.3
255
25.5
CM13G02840
Cyanidioschyzon merolae
7.3e-12
73.9
257
26.1
Ec-14_004450
Ectocarpus siliculosus
1.2e-11
73.2
316
24.4
ptri209620
Phaeodactylum tricornutum
1.6e-11
72.8
273
27.8
YDR419W
Saccharomyces cerevisiae strain S288C
2.8e-11
72.0
273
23.4
ccr06940
Chondrus crispus
6.8e-10
67.4
286
23.8
Ec-17_000370
Ectocarpus siliculosus
1.5e-09
66.2
175
29.1
ptri167230
Phaeodactylum tricornutum
1.5e-09
66.2
323
25.1
SPBC16A3.11
Schizosaccharomyces pombe
2.9e-08
62.0
272
23.2
tho441720
Thalassiosira oceanica
2.9e-08
62.0
280
23.6
emh725060
Emiliania huxleyi
3.7e-08
61.6
268
22.4
emh225200
Emiliania huxleyi
1.9e-07
59.3
249
25.7
PSNMU-V1.4_AUG-EV-PASAV3_0038520
Pseudo-nitzschia multistriata
2.4e-07
58.9
293
20.8
ptri32900
Phaeodactylum tricornutum
2.4e-07
58.9
275
24.7
Cre07.g338602
Chlamydomonas reinhardtii
4.1e-07
58.2
69
40.6
Cre17.g732900
Chlamydomonas reinhardtii
4.1e-07
58.2
261
23.0
sya00G217370
Synedra acus
4.1e-07
58.2
325
22.2
Cre12.g524150
Chlamydomonas reinhardtii
1.2e-06
56.6
147
25.9
fso58700
Fistulifera solaris
2.7e-06
55.5
302
24.2
ps00G76180
Pseudo-nitzschia multiseries
4.6e-06
54.7
264
22.3
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (4 genes)
Thalassiosira pseudonana (0 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (0 genes)
Cyclotella cryptica (0 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (2 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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