Toggle navigation
Data
Overview
Download
Analyze
Gene families
Expansion_plot
Gene family finder
Synteny plot
Colinearity
Ks-graphs
Skyline plot
WGDotplot
Colinear region finder
Localization
Functional clusters
WGMapping
Other
Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G243310
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G243310
Synedra acus
3.5e-110
399.4
273
100.0
sya00G192990
Synedra acus
2.8e-107
389.8
273
96.0
ptri110440
Phaeodactylum tricornutum
5.7e-36
152.9
109
65.1
CC00G187920
Cyclotella cryptica
3.7e-35
150.2
124
58.1
gene15620
Fragilariopsis cylindrus
4.8e-35
149.8
116
62.9
Sro196_g083660
Seminavis robusta
6.3e-35
149.4
110
62.7
fso93680
Fistulifera solaris
1.1e-34
148.7
115
56.5
tps77500
Thalassiosira pseudonana
2.6e-33
144.1
125
57.6
ps00G37350
Pseudo-nitzschia multiseries
1.2e-30
135.2
109
60.6
tho339780
Thalassiosira oceanica
3.6e-30
133.7
123
52.8
PSNMU-V1.4_AUG-EV-PASAV3_0036820
Pseudo-nitzschia multistriata
5.3e-26
119.8
135
45.9
FBgn0037342
Drosophila melanogaster
5.0e-24
113.2
133
42.1
Naga_100218g6
Nannochloropsis gaditana
8.5e-24
112.5
120
44.2
WBGene00021901
Caenorhabditis elegans
1.5e-23
111.7
120
46.7
ENSG00000126254
Homo sapiens
2.5e-23
110.9
116
47.4
AA0025G00160
Aureococcus anophagefferens
4.2e-23
110.2
116
44.0
AT3G04500
Arabidopsis thaliana
1.2e-22
108.6
118
42.4
gsu102530
Galdieria sulphuraria
8.0e-22
105.9
128
40.6
Ec-23_000060
Ectocarpus siliculosus
2.3e-21
104.4
105
44.8
Pp3c23_14650
Physcomitrella patens
2.3e-21
104.4
111
42.3
ccr63040
Chondrus crispus
6.8e-21
102.8
114
42.1
Cre02.g088800
Chlamydomonas reinhardtii
2.0e-20
101.3
108
43.5
SPAC22E12.02
Schizosaccharomyces pombe
4.8e-19
96.7
106
44.3
emh689550
Emiliania huxleyi
8.3e-19
95.9
148
35.1
pte95410
Paramecium tetraurelia
2.4e-18
94.4
111
41.4
CM10G02890
Cyanidioschyzon merolae
4.9e-11
70.1
99
37.4
AT3G14100
Arabidopsis thaliana
7.8e-09
62.8
79
41.8
ENSG00000180098
Homo sapiens
2.9e-08
60.8
129
33.3
Pp3c2_9144
Physcomitrella patens
8.6e-08
59.3
97
36.1
SPAC57A7.04c
Schizosaccharomyces pombe
1.5e-07
58.5
78
35.9
YHR086W
Saccharomyces cerevisiae strain S288C
1.9e-07
58.2
77
42.9
ccr145580
Chondrus crispus
2.5e-07
57.8
95
33.7
AA0034G00660
Aureococcus anophagefferens
3.3e-07
57.4
83
38.6
AT1G54080
Arabidopsis thaliana
3.3e-07
57.4
83
38.6
AT1G47490
Arabidopsis thaliana
4.3e-07
57.0
76
44.7
AT1G49760
Arabidopsis thaliana
4.3e-07
57.0
92
32.6
FBgn0085391
Drosophila melanogaster
4.3e-07
57.0
83
36.1
WBGene00015943
Caenorhabditis elegans
5.6e-07
56.6
83
39.8
AT1G17370
Arabidopsis thaliana
7.3e-07
56.2
79
39.2
WBGene00003903
Caenorhabditis elegans
7.3e-07
56.2
92
32.6
Sro979_g227190
Seminavis robusta
9.5e-07
55.8
78
32.1
AA0039G00410
Aureococcus anophagefferens
1.2e-06
55.5
79
36.7
AT1G71770
Arabidopsis thaliana
1.2e-06
55.5
93
32.3
Pp3c2_9140
Physcomitrella patens
1.2e-06
55.5
79
39.2
AT1G22760
Arabidopsis thaliana
1.6e-06
55.1
78
33.3
ccr141280
Chondrus crispus
2.1e-06
54.7
83
33.7
WBGene00001368
Caenorhabditis elegans
2.1e-06
54.7
139
28.8
FBgn0031607
Drosophila melanogaster
2.1e-06
54.7
78
41.0
ENSG00000151923
Homo sapiens
2.8e-06
54.3
85
32.9
Cre01.g039300
Chlamydomonas reinhardtii
3.6e-06
53.9
78
37.2
emh476430
Emiliania huxleyi
3.6e-06
53.9
78
37.2
emh296530
Emiliania huxleyi
3.6e-06
53.9
78
37.2
Pp3c14_4340
Physcomitrella patens
3.6e-06
53.9
85
32.9
sya00G161770
Synedra acus
3.6e-06
53.9
79
38.0
gsu38830
Galdieria sulphuraria
4.7e-06
53.5
91
31.9
ENSG00000116001
Homo sapiens
4.7e-06
53.5
90
31.1
Pp3c17_4050
Physcomitrella patens
4.7e-06
53.5
84
38.1
WBGene00007396
Caenorhabditis elegans
6.1e-06
53.1
83
36.1
YER165W
Saccharomyces cerevisiae strain S288C
8.0e-06
52.8
95
33.7
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (4 genes)
Drosophila melanogaster (3 genes)
Caenorhabditis elegans (5 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (8 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (3 genes)
Galdieria sulphuraria (2 genes)
Emiliania huxleyi (3 genes)
Paramecium tetraurelia (1 genes)
Seminavis robusta (2 genes)
Synedra acus (3 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing