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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G217370
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G217370
Synedra acus
0.0e+00
1293.1
654
100.0
Sro88_g046710
Seminavis robusta
8.7e-99
362.8
610
41.0
AT5G44740
Arabidopsis thaliana
7.0e-56
220.3
649
31.1
Naga_100010g99
Nannochloropsis gaditana
2.6e-55
218.4
538
32.0
emh135140
Emiliania huxleyi
1.7e-49
199.1
516
32.0
emh81660
Emiliania huxleyi
1.7e-49
199.1
516
32.0
ENSG00000170734
Homo sapiens
2.7e-47
191.8
430
34.7
Pp3c8_17250
Physcomitrella patens
5.9e-47
190.7
608
29.4
Cre12.g524150
Chlamydomonas reinhardtii
1.4e-40
169.5
268
40.7
FBgn0037141
Drosophila melanogaster
3.8e-38
161.4
568
28.7
WBGene00018721
Caenorhabditis elegans
1.3e-33
146.4
426
29.6
gsu71910
Galdieria sulphuraria
2.7e-31
138.7
474
28.7
Pp3c14_23660
Physcomitrella patens
1.0e-30
136.7
457
27.1
emh540590
Emiliania huxleyi
1.5e-29
132.9
442
28.3
Ec-01_006080
Ectocarpus siliculosus
2.8e-28
128.6
537
27.4
ccr06940
Chondrus crispus
1.3e-25
119.8
516
26.4
CM13G02840
Cyanidioschyzon merolae
3.0e-22
108.6
508
27.0
emh725060
Emiliania huxleyi
3.9e-22
108.2
432
27.8
AA0010G01150
Aureococcus anophagefferens
3.3e-21
105.1
325
27.4
CC00G27440
Cyclotella cryptica
3.3e-21
105.1
536
27.6
Ec-19_003590
Ectocarpus siliculosus
5.8e-18
94.4
213
28.6
SPBC16A3.11
Schizosaccharomyces pombe
9.8e-18
93.6
503
22.3
ptri167230
Phaeodactylum tricornutum
4.9e-17
91.3
480
25.2
Sro492_g153880
Seminavis robusta
2.0e-15
85.9
346
26.6
Cre03.g148050
Chlamydomonas reinhardtii
1.7e-14
82.8
459
25.3
fso166840
Fistulifera solaris
1.7e-14
82.8
327
26.0
fso02980
Fistulifera solaris
3.0e-14
82.0
327
26.3
YDR419W
Saccharomyces cerevisiae strain S288C
3.0e-14
82.0
422
24.6
tps207050
Thalassiosira pseudonana
3.0e-14
82.0
317
28.1
PSNMU-V1.4_AUG-EV-PASAV3_0038520
Pseudo-nitzschia multistriata
5.0e-14
81.3
392
26.0
pte497140
Paramecium tetraurelia
5.0e-14
81.3
446
25.6
pte645160
Paramecium tetraurelia
1.1e-13
80.1
450
24.7
Cre07.g338602
Chlamydomonas reinhardtii
2.1e-12
75.9
254
28.0
sya00G252360
Synedra acus
1.8e-11
72.8
418
25.1
FBgn0037554
Drosophila melanogaster
1.9e-08
62.8
445
25.6
ENSG00000101751
Homo sapiens
1.9e-08
62.8
341
26.1
gsu33630
Galdieria sulphuraria
2.4e-08
62.4
311
23.5
emh530300
Emiliania huxleyi
7.1e-08
60.8
196
27.0
emh67860
Emiliania huxleyi
7.1e-08
60.8
196
27.0
ps00G114530
Pseudo-nitzschia multiseries
7.1e-08
60.8
364
22.0
ENSG00000122008
Homo sapiens
1.2e-07
60.1
392
24.2
ps00G14990
Pseudo-nitzschia multiseries
4.6e-07
58.2
198
24.7
gene10065
Fragilariopsis cylindrus
1.0e-06
57.0
411
22.4
ccr44120
Chondrus crispus
1.7e-06
56.2
184
25.5
CM01G00620
Cyanidioschyzon merolae
3.0e-06
55.5
325
25.5
AT1G49980
Arabidopsis thaliana
3.9e-06
55.1
137
29.2
gsu142230
Galdieria sulphuraria
8.6e-06
53.9
112
33.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (2 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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