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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G214510
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G214510
Synedra acus
0.0e+00
1448.3
756
100.0
sya00G221400
Synedra acus
0.0e+00
1400.6
756
93.1
ptri153740
Phaeodactylum tricornutum
2.0e-94
348.6
689
35.3
fso159700
Fistulifera solaris
1.7e-93
345.5
725
34.9
fso72150
Fistulifera solaris
1.0e-90
336.3
724
35.1
tho98120
Thalassiosira oceanica
2.4e-84
315.1
586
36.3
ps00G16830
Pseudo-nitzschia multiseries
2.2e-82
308.5
675
34.2
Sro2468_g328590
Seminavis robusta
7.0e-76
287.0
770
31.2
Sro617_g176140
Seminavis robusta
8.6e-74
280.0
737
31.8
Pp3c18_13500
Physcomitrella patens
4.0e-55
218.0
545
32.8
AT2G40770
Arabidopsis thaliana
6.8e-47
190.7
505
31.3
gsu117980
Galdieria sulphuraria
2.4e-44
182.2
521
30.3
Naga_100079g10
Nannochloropsis gaditana
3.0e-42
175.3
545
30.8
CM12G02870
Cyanidioschyzon merolae
5.6e-41
171.0
502
30.7
ENSG00000146414
Homo sapiens
5.1e-34
147.9
257
34.2
Ec-07_006640
Ectocarpus siliculosus
7.3e-33
144.1
177
45.2
FBgn0035689
Drosophila melanogaster
2.4e-28
129.0
521
27.1
Cre13.g603400
Chlamydomonas reinhardtii
3.9e-26
121.7
145
44.8
Cre06.g304000
Chlamydomonas reinhardtii
3.4e-22
108.6
150
38.7
ccr183280
Chondrus crispus
1.2e-19
100.1
414
26.1
SPAC144.05
Schizosaccharomyces pombe
7.9e-19
97.4
219
29.2
Pp3c6_21140
Physcomitrella patens
3.9e-18
95.1
201
32.8
ENSG00000071794
Homo sapiens
8.1e-16
87.4
527
24.3
AT5G22750
Arabidopsis thaliana
2.4e-15
85.9
241
27.0
emh401240
Emiliania huxleyi
5.3e-15
84.7
243
30.0
WBGene00010061
Caenorhabditis elegans
3.4e-14
82.0
238
26.9
Pp3c5_4990
Physcomitrella patens
5.8e-14
81.3
139
34.5
Pp3c5_5006
Physcomitrella patens
5.8e-14
81.3
139
34.5
ps00G10630
Pseudo-nitzschia multiseries
1.3e-13
80.1
229
29.3
ENSG00000116830
Homo sapiens
1.7e-13
79.7
231
29.0
AA0002G03300
Aureococcus anophagefferens
2.2e-13
79.3
204
31.9
AT5G43530
Arabidopsis thaliana
2.9e-13
79.0
244
28.7
AT5G05130
Arabidopsis thaliana
1.4e-12
76.6
158
32.3
YBR114W
Saccharomyces cerevisiae strain S288C
2.5e-12
75.9
168
29.2
AA0009G00720
Aureococcus anophagefferens
9.3e-12
73.9
162
31.5
WBGene00020742
Caenorhabditis elegans
9.3e-12
73.9
237
26.2
gene14651
Fragilariopsis cylindrus
9.3e-12
73.9
244
26.6
Ec-14_005810
Ectocarpus siliculosus
1.2e-11
73.6
155
31.6
Cre14.g614400
Chlamydomonas reinhardtii
1.6e-11
73.2
75
44.0
emh349660
Emiliania huxleyi
2.7e-11
72.4
174
33.9
gene9885
Fragilariopsis cylindrus
2.7e-11
72.4
246
27.2
AA0003G02210
Aureococcus anophagefferens
3.5e-11
72.0
201
28.9
YLR247C
Saccharomyces cerevisiae strain S288C
4.6e-11
71.6
218
26.6
CM18G02590
Cyanidioschyzon merolae
6.0e-11
71.2
496
22.6
ptri137110
Phaeodactylum tricornutum
6.0e-11
71.2
164
29.3
Cre10.g455750
Chlamydomonas reinhardtii
7.9e-11
70.9
248
25.8
FBgn0002542
Drosophila melanogaster
1.0e-10
70.5
233
24.5
emh656650
Emiliania huxleyi
1.0e-10
70.5
123
36.6
gsu135440
Galdieria sulphuraria
1.3e-10
70.1
122
36.1
pte230620
Paramecium tetraurelia
1.3e-10
70.1
103
36.9
PSNMU-V1.4_AUG-EV-PASAV3_0049980
Pseudo-nitzschia multistriata
2.3e-10
69.3
242
26.4
tho170600
Thalassiosira oceanica
2.3e-10
69.3
124
32.3
ps00G19320
Pseudo-nitzschia multiseries
6.7e-10
67.8
258
26.0
AT3G16600
Arabidopsis thaliana
8.7e-10
67.4
240
25.4
pte69860
Paramecium tetraurelia
1.1e-09
67.0
103
37.9
pte264830
Paramecium tetraurelia
1.1e-09
67.0
109
34.9
emh248570
Emiliania huxleyi
1.9e-09
66.2
167
30.5
PSNMU-V1.4_AUG-EV-PASAV3_0033860
Pseudo-nitzschia multistriata
2.5e-09
65.9
250
26.0
ccr76240
Chondrus crispus
3.3e-09
65.5
109
37.6
SPAC13G6.01c
Schizosaccharomyces pombe
5.6e-09
64.7
108
32.4
AT1G61140
Arabidopsis thaliana
7.4e-09
64.3
108
34.3
pte315540
Paramecium tetraurelia
7.4e-09
64.3
114
31.6
Sro868_g213300
Seminavis robusta
7.4e-09
64.3
212
26.4
AT3G20010
Arabidopsis thaliana
9.6e-09
63.9
103
35.0
gsu128120
Galdieria sulphuraria
9.6e-09
63.9
494
21.5
PSNMU-V1.4_AUG-EV-PASAV3_0086750
Pseudo-nitzschia multistriata
9.6e-09
63.9
204
26.0
sya00G205480
Synedra acus
9.6e-09
63.9
65
40.0
AA0001G01200
Aureococcus anophagefferens
2.1e-08
62.8
110
36.4
emh296390
Emiliania huxleyi
2.1e-08
62.8
120
33.3
AT1G11100
Arabidopsis thaliana
2.8e-08
62.4
133
31.6
Cre01.g046237
Chlamydomonas reinhardtii
3.7e-08
62.0
104
34.6
ptri112720
Phaeodactylum tricornutum
4.8e-08
61.6
64
45.3
gene18436
Fragilariopsis cylindrus
6.2e-08
61.2
65
40.0
Sro588_g171530
Seminavis robusta
6.2e-08
61.2
192
29.7
AT1G50410
Arabidopsis thaliana
8.2e-08
60.8
102
36.3
Sro243_g097000
Seminavis robusta
8.2e-08
60.8
110
32.7
CC00G03610
Cyclotella cryptica
1.1e-07
60.5
262
26.7
ccr184940
Chondrus crispus
1.4e-07
60.1
107
33.6
Naga_100072g6
Nannochloropsis gaditana
1.4e-07
60.1
113
35.4
Pp3c18_11770
Physcomitrella patens
1.8e-07
59.7
108
32.4
CC00G05460
Cyclotella cryptica
2.4e-07
59.3
65
40.0
YLR032W
Saccharomyces cerevisiae strain S288C
2.4e-07
59.3
107
34.6
Sro179_g078480
Seminavis robusta
4.0e-07
58.5
280
25.7
tps152690
Thalassiosira pseudonana
4.0e-07
58.5
65
40.0
CM09G01190
Cyanidioschyzon merolae
5.3e-07
58.2
106
33.0
PSNMU-V1.4_AUG-EV-PASAV3_0090180
Pseudo-nitzschia multistriata
9.0e-07
57.4
65
36.9
ps00G167010
Pseudo-nitzschia multiseries
9.0e-07
57.4
65
36.9
fso179450
Fistulifera solaris
1.2e-06
57.0
214
26.2
Naga_100009g100
Nannochloropsis gaditana
1.5e-06
56.6
115
35.7
Pp3c21_12900
Physcomitrella patens
2.0e-06
56.2
65
41.5
fso184030
Fistulifera solaris
2.6e-06
55.8
259
26.3
Naga_100236g7
Nannochloropsis gaditana
3.4e-06
55.5
73
31.5
YOR191W
Saccharomyces cerevisiae strain S288C
3.4e-06
55.5
174
25.9
Sro11_g008610
Seminavis robusta
3.4e-06
55.5
65
35.4
Ec-23_001670
Ectocarpus siliculosus
4.5e-06
55.1
64
40.6
Naga_100467g2
Nannochloropsis gaditana
4.5e-06
55.1
68
39.7
emh680790
Emiliania huxleyi
5.8e-06
54.7
100
36.0
gene19055
Fragilariopsis cylindrus
7.6e-06
54.3
119
29.4
ccr67660
Chondrus crispus
1.0e-05
53.9
106
36.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (4 genes)
Fistulifera solaris (4 genes)
Fragilariopsis cylindrus (4 genes)
Cyclotella cryptica (2 genes)
Aureococcus anophagefferens (4 genes)
Ectocarpus siliculosus (3 genes)
Nannochloropsis gaditana (5 genes)
Homo sapiens (3 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (2 genes)
Saccharomyces cerevisiae strain S288C (4 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (9 genes)
Cyanidioschyzon merolae (3 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (3 genes)
Emiliania huxleyi (6 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (7 genes)
Synedra acus (3 genes)
Physcomitrella patens (6 genes)
Chlamydomonas reinhardtii (5 genes)
Pseudo-nitzschia multistriata (4 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing