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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G202680
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G202680
Synedra acus
2.4e-270
932.2
440
100.0
sya00G202700
Synedra acus
4.9e-239
828.2
405
96.5
PSNMU-V1.4_AUG-EV-PASAV3_0000620
Pseudo-nitzschia multistriata
2.3e-87
324.3
468
42.1
gene20500
Fragilariopsis cylindrus
6.5e-82
306.2
470
41.1
ptri27390
Phaeodactylum tricornutum
6.1e-80
299.7
477
39.6
fso87160
Fistulifera solaris
1.4e-71
271.9
479
37.0
Sro1227_g254300
Seminavis robusta
1.6e-67
258.5
530
34.5
tho10380
Thalassiosira oceanica
7.7e-67
256.1
495
38.0
CC00G185600
Cyclotella cryptica
1.0e-66
255.8
538
35.3
fso156290
Fistulifera solaris
4.7e-64
246.9
484
35.1
tps17280
Thalassiosira pseudonana
6.7e-63
243.0
552
33.2
ps00G138460
Pseudo-nitzschia multiseries
9.1e-52
206.1
323
41.8
Naga_100066g4
Nannochloropsis gaditana
3.7e-37
157.5
496
28.4
Ec-01_012170
Ectocarpus siliculosus
4.1e-36
154.1
469
29.9
Pp3c25_650
Physcomitrella patens
1.3e-26
122.5
496
26.6
ENSG00000071994
Homo sapiens
4.1e-20
100.9
442
25.8
gsu127760
Galdieria sulphuraria
1.2e-16
89.4
416
26.0
FBgn0021875
Drosophila melanogaster
3.1e-15
84.7
393
23.9
Pp3c22_7380
Physcomitrella patens
3.1e-15
84.7
468
25.2
WBGene00011116
Caenorhabditis elegans
1.3e-13
79.3
337
26.4
AT4G02220
Arabidopsis thaliana
1.4e-12
75.9
330
28.5
CM03G00160
Cyanidioschyzon merolae
1.0e-10
69.7
463
24.0
emh51920
Emiliania huxleyi
2.0e-06
55.5
79
40.5
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (1 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (1 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (0 genes)
Arabidopsis thaliana (1 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (0 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (1 genes)
Paramecium tetraurelia (0 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (2 genes)
Chlamydomonas reinhardtii (0 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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