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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G161050
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G161050
Synedra acus
8.9e-184
644.0
297
100.0
ptri130290
Phaeodactylum tricornutum
2.8e-145
516.2
289
78.2
Sro968_g226070
Seminavis robusta
2.4e-144
513.1
287
78.0
fso77080
Fistulifera solaris
3.2e-141
502.7
299
74.6
gene16313
Fragilariopsis cylindrus
9.6e-138
491.1
277
77.3
fso160310
Fistulifera solaris
1.6e-137
490.3
289
75.1
fso77050
Fistulifera solaris
1.5e-135
483.8
293
75.4
fso191720
Fistulifera solaris
2.0e-135
483.4
293
75.1
Sro99_g050950
Seminavis robusta
4.9e-134
478.8
261
77.4
ps00G33510
Pseudo-nitzschia multiseries
1.0e-131
471.1
267
76.8
tps130000
Thalassiosira pseudonana
3.1e-112
406.4
247
72.1
tho217020
Thalassiosira oceanica
6.5e-102
372.1
314
54.1
tps193950
Thalassiosira pseudonana
1.2e-84
314.7
240
56.2
sya00G196410
Synedra acus
1.8e-83
310.8
280
48.2
Sro70_g039030
Seminavis robusta
2.3e-83
310.5
287
46.0
tps142420
Thalassiosira pseudonana
2.3e-83
310.5
240
54.6
fso199510
Fistulifera solaris
2.0e-82
307.4
297
45.5
fso73640
Fistulifera solaris
7.5e-82
305.4
297
45.5
ptri72160
Phaeodactylum tricornutum
6.3e-81
302.4
281
45.9
ptri69840
Phaeodactylum tricornutum
1.1e-80
301.6
301
44.2
ps00G65070
Pseudo-nitzschia multiseries
3.1e-80
300.1
306
44.4
CC00G149660
Cyclotella cryptica
3.5e-79
296.6
331
42.3
fso43770
Fistulifera solaris
2.2e-78
293.9
282
46.5
fso64760
Fistulifera solaris
6.5e-78
292.4
318
43.1
gene18213
Fragilariopsis cylindrus
1.5e-77
291.2
281
43.4
Sro695_g188680
Seminavis robusta
9.2e-72
271.9
262
46.6
CC00G122160
Cyclotella cryptica
1.7e-70
267.7
298
44.0
CC00G69060
Cyclotella cryptica
2.0e-63
244.2
152
68.4
sya00G00440
Synedra acus
2.0e-55
217.6
165
53.9
ENSG00000163743
Homo sapiens
8.1e-52
205.7
232
39.2
FBgn0031816
Drosophila melanogaster
2.6e-50
200.7
263
36.5
CM13G01410
Cyanidioschyzon merolae
3.5e-47
190.3
246
40.7
Cre05.g248550
Chlamydomonas reinhardtii
5.6e-45
183.0
242
37.2
AT3G18290
Arabidopsis thaliana
1.2e-44
181.8
252
38.5
sya00G162130
Synedra acus
4.0e-43
176.8
253
37.5
Naga_100090g9
Nannochloropsis gaditana
1.2e-42
175.3
261
36.4
AT1G74770
Arabidopsis thaliana
3.4e-42
173.7
285
35.1
ccr65580
Chondrus crispus
3.4e-42
173.7
248
35.9
Sro9_g007140
Seminavis robusta
1.3e-41
171.8
141
49.6
fso155640
Fistulifera solaris
1.7e-41
171.4
251
36.3
SPAC2F3.16
Schizosaccharomyces pombe
6.4e-41
169.5
251
33.5
CC00G86210
Cyclotella cryptica
5.4e-40
166.4
251
34.7
AT1G18910
Arabidopsis thaliana
6.0e-39
162.9
267
34.1
Cre17.g718300
Chlamydomonas reinhardtii
7.8e-39
162.5
245
34.7
tho328140
Thalassiosira oceanica
1.1e-37
158.7
297
33.0
ccr36960
Chondrus crispus
2.5e-37
157.5
323
31.9
Ec-26_004520
Ectocarpus siliculosus
4.3e-37
156.8
265
33.2
tps146910
Thalassiosira pseudonana
2.8e-36
154.1
213
36.6
AT3G62970
Arabidopsis thaliana
6.2e-36
152.9
243
33.3
ccr161060
Chondrus crispus
1.8e-35
151.4
312
30.4
ps00G05920
Pseudo-nitzschia multiseries
3.1e-35
150.6
254
32.7
Pp3c25_14501
Physcomitrella patens
1.5e-34
148.3
247
32.4
Pp3c25_14500
Physcomitrella patens
1.5e-34
148.3
247
32.4
Pp3c14_5600
Physcomitrella patens
7.6e-34
146.0
244
30.7
Pp3c10_4820
Physcomitrella patens
1.3e-33
145.2
244
30.7
Pp3c6_1960
Physcomitrella patens
1.3e-33
145.2
247
31.6
gsu76240
Galdieria sulphuraria
2.9e-33
144.1
251
33.9
fso150310
Fistulifera solaris
4.9e-33
143.3
189
37.0
Pp3c11_6970
Physcomitrella patens
6.4e-33
142.9
245
32.2
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
3.2e-32
140.6
97
63.9
AT5G22920
Arabidopsis thaliana
9.3e-32
139.0
245
30.6
AT5G18650
Arabidopsis thaliana
2.1e-31
137.9
244
29.5
Pp3c2_31820
Physcomitrella patens
4.6e-31
136.7
301
29.9
Pp3c1_6070
Physcomitrella patens
3.3e-29
130.6
286
28.3
AT5G25560
Arabidopsis thaliana
5.6e-29
129.8
210
32.4
pte243060
Paramecium tetraurelia
9.6e-29
129.0
247
30.4
tho87860
Thalassiosira oceanica
1.3e-28
128.6
235
31.9
pte443830
Paramecium tetraurelia
9.9e-26
119.0
246
29.3
pte760660
Paramecium tetraurelia
9.3e-24
112.5
246
28.0
gene11141
Fragilariopsis cylindrus
5.1e-22
106.7
196
30.1
ccr27680
Chondrus crispus
6.4e-17
89.7
198
28.8
Sro345_g122370
Seminavis robusta
7.9e-15
82.8
105
38.1
Sro9_g007130
Seminavis robusta
1.9e-08
61.6
43
55.8
SPBC17D11.02c
Schizosaccharomyces pombe
1.8e-06
55.1
91
33.0
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (3 genes)
Cyclotella cryptica (4 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (2 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (4 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (7 genes)
Synedra acus (4 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Genes only
Positions and Genes
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