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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G149180
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G39070
Synedra acus
7.6e-65
247.7
122
100.0
sya00G149180
Synedra acus
7.6e-65
247.7
122
100.0
fso155090
Fistulifera solaris
6.3e-43
174.9
122
66.4
ptri43170
Phaeodactylum tricornutum
6.3e-43
174.9
122
66.4
PSNMU-V1.4_AUG-EV-PASAV3_0083710
Pseudo-nitzschia multistriata
1.5e-41
170.2
123
65.9
tps157040
Thalassiosira pseudonana
3.4e-41
169.1
122
61.5
CC00G142210
Cyclotella cryptica
2.9e-40
166.0
122
60.7
ps00G52330
Pseudo-nitzschia multiseries
3.9e-37
155.6
123
61.0
Sro1226_g254190
Seminavis robusta
7.4e-36
151.4
121
56.2
Naga_100010g44
Nannochloropsis gaditana
6.5e-32
138.3
120
55.0
gene6843
Fragilariopsis cylindrus
1.2e-25
117.5
124
48.4
gene169
Fragilariopsis cylindrus
1.2e-25
117.5
124
48.4
AT1G27310
Arabidopsis thaliana
4.2e-23
109.0
122
42.6
Ec-02_000700
Ectocarpus siliculosus
1.6e-22
107.1
123
45.5
Pp3c2_25620
Physcomitrella patens
1.6e-22
107.1
122
42.6
AT1G27970
Arabidopsis thaliana
1.0e-21
104.4
118
41.5
Pp3c7_12750
Physcomitrella patens
1.4e-21
104.0
122
41.8
gsu133240
Galdieria sulphuraria
5.2e-21
102.1
123
43.1
emh611570
Emiliania huxleyi
1.5e-20
100.5
118
44.9
emh255370
Emiliania huxleyi
1.5e-20
100.5
118
44.9
Pp3c11_12220
Physcomitrella patens
9.7e-20
97.8
122
39.3
AT1G11570
Arabidopsis thaliana
1.4e-18
94.0
123
37.4
AA0001G03000
Aureococcus anophagefferens
1.8e-18
93.6
125
41.6
SPAC15F9.03c
Schizosaccharomyces pombe
7.0e-18
91.7
118
41.5
pte403660
Paramecium tetraurelia
1.2e-17
90.9
119
36.1
pte469160
Paramecium tetraurelia
2.0e-17
90.1
119
39.5
CM20G04500
Cyanidioschyzon merolae
2.6e-17
89.7
124
39.5
pte546800
Paramecium tetraurelia
2.6e-17
89.7
119
39.5
Cre07.g316000
Chlamydomonas reinhardtii
3.5e-17
89.4
120
40.0
YER009W
Saccharomyces cerevisiae strain S288C
4.5e-17
89.0
117
39.3
ccr06240
Chondrus crispus
2.9e-16
86.3
126
37.3
WBGene00004305
Caenorhabditis elegans
2.0e-12
73.6
123
36.6
FBgn0031145
Drosophila melanogaster
3.3e-12
72.8
120
38.3
FBgn0032680
Drosophila melanogaster
9.7e-12
71.2
120
37.5
Cre06.g249150
Chlamydomonas reinhardtii
2.9e-08
59.7
125
29.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (0 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (1 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (0 genes)
Drosophila melanogaster (2 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (3 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (2 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (1 genes)
Synedra acus (2 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing