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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
sya00G143960
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
sya00G143960
Synedra acus
0.0e+00
1203.7
651
100.0
sya00G127980
Synedra acus
0.0e+00
1184.5
651
94.8
ptri80280
Phaeodactylum tricornutum
7.4e-183
642.1
656
53.0
fso181940
Fistulifera solaris
9.4e-162
572.0
668
46.7
fso41110
Fistulifera solaris
3.3e-159
563.5
668
47.8
Sro773_g200410
Seminavis robusta
1.7e-158
561.2
652
47.5
Sro944_g222890
Seminavis robusta
1.7e-155
551.2
658
48.8
tps198210
Thalassiosira pseudonana
4.0e-152
540.0
636
48.4
CC00G33490
Cyclotella cryptica
8.2e-150
532.3
663
44.8
PSNMU-V1.4_AUG-EV-PASAV3_0122360
Pseudo-nitzschia multistriata
3.2e-138
493.8
643
43.5
gene3215
Fragilariopsis cylindrus
4.9e-134
479.9
640
40.6
ps00G126120
Pseudo-nitzschia multiseries
1.6e-132
474.9
653
40.7
tho401580
Thalassiosira oceanica
3.9e-115
417.2
461
47.3
gene19869
Fragilariopsis cylindrus
1.4e-109
398.7
655
40.5
Naga_100067g7
Nannochloropsis gaditana
2.5e-98
361.3
644
37.6
AT2G06510
Arabidopsis thaliana
1.1e-74
282.7
646
29.7
ENSG00000132383
Homo sapiens
3.3e-74
281.2
644
30.1
AT4G19130
Arabidopsis thaliana
6.9e-72
273.5
695
28.8
AA0015G00520
Aureococcus anophagefferens
7.1e-69
263.5
649
31.1
Pp3c20_10450
Physcomitrella patens
6.0e-68
260.4
706
30.2
Pp3c23_16880
Physcomitrella patens
1.3e-67
259.2
705
29.2
FBgn0010173
Drosophila melanogaster
1.8e-67
258.8
663
30.6
gsu10940
Galdieria sulphuraria
5.1e-67
257.3
674
28.9
SPBC660.13c
Schizosaccharomyces pombe
8.7e-67
256.5
633
29.9
AT5G45400
Arabidopsis thaliana
1.9e-66
255.4
765
27.6
CM03G01230
Cyanidioschyzon merolae
5.9e-63
243.8
670
27.6
AA0022G00030
Aureococcus anophagefferens
5.7e-58
227.3
391
35.0
Pp3c1_20770
Physcomitrella patens
5.7e-58
227.3
471
32.5
AT5G08020
Arabidopsis thaliana
9.0e-56
219.9
644
27.2
Cre17.g718850
Chlamydomonas reinhardtii
3.4e-55
218.0
481
32.0
YAR007C
Saccharomyces cerevisiae strain S288C
5.5e-53
210.7
471
29.5
AT5G61000
Arabidopsis thaliana
9.4e-53
209.9
640
26.9
ccr116080
Chondrus crispus
2.0e-47
192.2
656
26.2
emh244200
Emiliania huxleyi
1.1e-37
159.8
769
25.2
emh82610
Emiliania huxleyi
3.7e-33
144.8
668
26.3
emh418280
Emiliania huxleyi
9.1e-32
140.2
658
26.0
WBGene00017546
Caenorhabditis elegans
1.3e-30
136.3
479
23.2
Cre16.g651000
Chlamydomonas reinhardtii
4.0e-27
124.8
654
25.5
pte321820
Paramecium tetraurelia
1.5e-26
122.9
457
24.1
pte565200
Paramecium tetraurelia
9.1e-24
113.6
465
23.0
pte570770
Paramecium tetraurelia
1.1e-21
106.7
388
24.2
tho594660
Thalassiosira oceanica
3.8e-14
81.6
119
38.7
pte703010
Paramecium tetraurelia
2.8e-12
75.5
397
22.7
emh278560
Emiliania huxleyi
6.1e-12
74.3
110
40.0
tho264400
Thalassiosira oceanica
2.0e-10
69.3
96
38.5
AA0003G02890
Aureococcus anophagefferens
3.2e-08
62.0
90
34.4
emh98290
Emiliania huxleyi
1.0e-06
57.0
94
36.2
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (1 genes)
Thalassiosira pseudonana (1 genes)
Thalassiosira oceanica (3 genes)
Pseudo-nitzschia multiseries (1 genes)
Fistulifera solaris (2 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (1 genes)
Aureococcus anophagefferens (3 genes)
Ectocarpus siliculosus (0 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (1 genes)
Saccharomyces cerevisiae strain S288C (1 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (5 genes)
Paramecium tetraurelia (4 genes)
Seminavis robusta (2 genes)
Synedra acus (2 genes)
Physcomitrella patens (3 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
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