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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri72160
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri72160
Phaeodactylum tricornutum
5.6e-270
931.0
455
100.0
Sro70_g039030
Seminavis robusta
7.5e-166
585.1
421
68.2
fso43770
Fistulifera solaris
2.4e-148
526.9
406
65.5
fso64760
Fistulifera solaris
2.4e-148
526.9
443
61.9
sya00G196410
Synedra acus
1.1e-137
491.5
356
67.4
gene18213
Fragilariopsis cylindrus
2.1e-136
487.3
337
68.0
ps00G65070
Pseudo-nitzschia multiseries
2.1e-136
487.3
343
68.5
ptri69840
Phaeodactylum tricornutum
9.0e-119
428.7
317
63.1
fso199510
Fistulifera solaris
6.4e-117
422.5
440
51.1
fso73640
Fistulifera solaris
4.6e-115
416.4
448
49.6
CC00G149660
Cyclotella cryptica
4.3e-113
409.8
360
55.8
tps193950
Thalassiosira pseudonana
1.6e-104
381.3
270
66.7
CC00G122160
Cyclotella cryptica
5.3e-103
376.3
373
52.5
tps142420
Thalassiosira pseudonana
2.7e-99
364.0
270
62.2
Sro695_g188680
Seminavis robusta
9.0e-95
349.0
300
57.3
ps00G33510
Pseudo-nitzschia multiseries
2.5e-81
304.3
278
48.6
ptri130290
Phaeodactylum tricornutum
8.2e-80
299.3
360
41.1
gene16313
Fragilariopsis cylindrus
1.8e-79
298.1
278
47.8
sya00G161050
Synedra acus
1.8e-79
298.1
281
45.9
fso77080
Fistulifera solaris
2.4e-79
297.7
365
41.6
Sro968_g226070
Seminavis robusta
5.3e-79
296.6
356
41.9
fso77050
Fistulifera solaris
5.0e-77
290.0
362
42.0
fso191720
Fistulifera solaris
1.1e-76
288.9
362
42.0
tho217020
Thalassiosira oceanica
1.4e-76
288.5
356
42.7
Sro99_g050950
Seminavis robusta
2.5e-76
287.7
276
46.4
tps130000
Thalassiosira pseudonana
9.4e-76
285.8
271
48.0
fso160310
Fistulifera solaris
1.4e-74
282.0
357
40.3
sya00G00440
Synedra acus
3.1e-63
244.2
171
63.7
tho328140
Thalassiosira oceanica
4.7e-51
203.8
415
32.8
Sro9_g007140
Seminavis robusta
1.4e-47
192.2
148
56.8
FBgn0031816
Drosophila melanogaster
4.9e-40
167.2
284
33.1
ENSG00000163743
Homo sapiens
2.4e-39
164.9
257
32.7
CC00G69060
Cyclotella cryptica
1.0e-37
159.5
239
36.4
CM13G01410
Cyanidioschyzon merolae
4.3e-36
154.1
273
35.5
Cre05.g248550
Chlamydomonas reinhardtii
1.6e-35
152.1
273
35.9
AT3G62970
Arabidopsis thaliana
6.2e-35
150.2
269
36.8
Cre17.g718300
Chlamydomonas reinhardtii
7.5e-33
143.3
270
34.8
AT1G18910
Arabidopsis thaliana
2.4e-31
138.3
356
29.5
AT1G74770
Arabidopsis thaliana
2.4e-31
138.3
355
28.2
ccr161060
Chondrus crispus
1.2e-30
136.0
304
30.6
SPAC2F3.16
Schizosaccharomyces pombe
1.2e-30
136.0
276
31.2
AT3G18290
Arabidopsis thaliana
3.0e-29
131.3
275
30.5
CC00G86210
Cyclotella cryptica
5.0e-29
130.6
275
28.0
ccr65580
Chondrus crispus
1.9e-28
128.6
276
29.0
Pp3c25_14501
Physcomitrella patens
1.9e-28
128.6
403
28.0
Pp3c25_14500
Physcomitrella patens
1.9e-28
128.6
403
28.0
Pp3c11_6970
Physcomitrella patens
3.3e-28
127.9
271
32.8
tps146910
Thalassiosira pseudonana
4.3e-28
127.5
216
31.5
Pp3c14_5600
Physcomitrella patens
5.6e-28
127.1
331
31.1
Ec-26_004520
Ectocarpus siliculosus
9.5e-28
126.3
290
32.1
ps00G05920
Pseudo-nitzschia multiseries
9.5e-28
126.3
276
34.4
AT5G22920
Arabidopsis thaliana
1.2e-27
125.9
270
33.3
Pp3c2_31820
Physcomitrella patens
2.1e-27
125.2
270
33.7
Pp3c6_1960
Physcomitrella patens
4.7e-27
124.0
355
30.1
Naga_100090g9
Nannochloropsis gaditana
6.2e-27
123.6
276
29.0
Pp3c10_4820
Physcomitrella patens
1.4e-26
122.5
269
30.9
gsu76240
Galdieria sulphuraria
3.1e-26
121.3
370
28.6
Pp3c1_6070
Physcomitrella patens
5.2e-26
120.6
270
32.2
AT5G18650
Arabidopsis thaliana
2.0e-25
118.6
270
30.7
fso155640
Fistulifera solaris
2.0e-25
118.6
417
25.9
AT5G25560
Arabidopsis thaliana
5.4e-23
110.5
240
34.6
pte443830
Paramecium tetraurelia
1.7e-21
105.5
273
30.4
fso150310
Fistulifera solaris
4.7e-19
97.4
215
27.9
pte760660
Paramecium tetraurelia
1.4e-18
95.9
277
30.3
Sro9_g007130
Seminavis robusta
1.9e-15
85.5
43
76.7
CC00G85450
Cyclotella cryptica
3.5e-14
81.3
96
42.7
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
9.9e-09
63.2
83
38.6
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (3 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (7 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (2 genes)
Seminavis robusta (6 genes)
Synedra acus (3 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing