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Interactive Phylogenetics Module
BLAST
Workbench
Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri70790
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri70790
Phaeodactylum tricornutum
0.0e+00
1517.3
841
100.0
fso10630
Fistulifera solaris
1.6e-198
694.5
799
47.3
fso131530
Fistulifera solaris
4.7e-198
693.0
800
46.0
Sro2022_g311530
Seminavis robusta
3.3e-159
563.9
851
39.0
PSNMU-V1.4_AUG-EV-PASAV3_0051450
Pseudo-nitzschia multistriata
4.2e-154
547.0
879
37.1
sya00G167560
Synedra acus
1.1e-151
538.9
864
38.1
tho66720
Thalassiosira oceanica
5.5e-130
466.8
899
39.7
ps00G192730
Pseudo-nitzschia multiseries
3.6e-129
464.2
750
42.9
tps110050
Thalassiosira pseudonana
2.5e-74
282.0
437
39.4
gene20565
Fragilariopsis cylindrus
4.9e-70
267.7
268
51.1
Naga_100014g58
Nannochloropsis gaditana
1.9e-69
265.8
865
28.6
ENSG00000037474
Homo sapiens
5.1e-67
257.7
764
27.0
CC00G178850
Cyclotella cryptica
8.6e-67
256.9
409
40.3
Ec-22_001160
Ectocarpus siliculosus
4.9e-62
241.1
553
33.3
Pp3c15_5210
Physcomitrella patens
2.5e-58
228.8
856
26.1
AT4G40000
Arabidopsis thaliana
1.2e-57
226.5
751
27.6
FBgn0026079
Drosophila melanogaster
1.2e-57
226.5
740
28.2
Pp3c15_5220
Physcomitrella patens
1.2e-55
219.9
806
26.1
CC00G193530
Cyclotella cryptica
2.6e-55
218.8
512
31.2
Cre03.g179860
Chlamydomonas reinhardtii
6.4e-54
214.2
356
38.8
gene20564
Fragilariopsis cylindrus
1.4e-53
213.0
199
51.3
YBL024W
Saccharomyces cerevisiae strain S288C
2.4e-53
212.2
252
46.8
SPAC17D4.04
Schizosaccharomyces pombe
3.2e-53
211.8
301
41.5
AT2G22400
Arabidopsis thaliana
7.8e-52
207.2
750
34.4
WBGene00021686
Caenorhabditis elegans
1.3e-51
206.5
353
38.8
pte516640
Paramecium tetraurelia
3.9e-51
204.9
501
31.9
SPAC23C4.17
Schizosaccharomyces pombe
2.5e-50
202.2
655
26.4
pte429730
Paramecium tetraurelia
3.3e-50
201.8
440
33.2
gsu121400
Galdieria sulphuraria
4.3e-50
201.4
357
37.0
gsu121420
Galdieria sulphuraria
4.3e-50
201.4
357
37.0
emh547510
Emiliania huxleyi
3.1e-48
195.3
385
36.6
CM07G01650
Cyanidioschyzon merolae
1.9e-45
186.0
240
44.6
Sro514_g158160
Seminavis robusta
2.8e-41
172.2
235
41.7
emh493920
Emiliania huxleyi
7.6e-39
164.1
242
40.9
emh128290
Emiliania huxleyi
7.6e-39
164.1
242
40.9
tps212910
Thalassiosira pseudonana
2.7e-36
155.6
287
37.6
emh768730
Emiliania huxleyi
6.0e-36
154.5
311
36.3
fso202150
Fistulifera solaris
3.0e-35
152.1
339
35.4
fso171700
Fistulifera solaris
1.1e-34
150.2
262
40.5
emh723580
Emiliania huxleyi
9.0e-32
140.6
251
36.3
CC00G23590
Cyclotella cryptica
3.8e-30
135.2
310
35.2
tho182620
Thalassiosira oceanica
2.1e-28
129.4
215
40.0
ptri64940
Phaeodactylum tricornutum
3.5e-28
128.6
259
36.3
tps53620
Thalassiosira pseudonana
6.0e-28
127.9
308
33.4
tho46140
Thalassiosira oceanica
1.3e-27
126.7
170
41.8
Sro107_g053980
Seminavis robusta
8.7e-27
124.0
247
34.8
PSNMU-V1.4_AUG-EV-PASAV3_0054110
Pseudo-nitzschia multistriata
3.3e-26
122.1
358
31.6
tho331080
Thalassiosira oceanica
3.4e-23
112.1
223
35.4
Sro2129_g315780
Seminavis robusta
1.0e-22
110.5
255
32.9
gene10375
Fragilariopsis cylindrus
5.0e-22
108.2
231
33.3
ps00G67680
Pseudo-nitzschia multiseries
1.9e-21
106.3
251
36.3
YNL061W
Saccharomyces cerevisiae strain S288C
3.9e-19
98.6
212
32.5
ENSG00000111641
Homo sapiens
6.7e-19
97.8
186
37.1
WBGene00021073
Caenorhabditis elegans
8.7e-19
97.4
185
39.5
Pp3s46_10
Physcomitrella patens
1.1e-18
97.1
166
34.9
tps193730
Thalassiosira pseudonana
1.1e-18
97.1
232
31.0
FBgn0033741
Drosophila melanogaster
1.5e-18
96.7
187
35.3
CC00G107180
Cyclotella cryptica
2.8e-17
92.4
215
35.8
sya00G86690
Synedra acus
1.1e-16
90.5
186
33.3
Naga_100012g60
Nannochloropsis gaditana
1.4e-16
90.1
196
36.7
pte574730
Paramecium tetraurelia
1.8e-16
89.7
166
38.0
tps146730
Thalassiosira pseudonana
3.1e-16
89.0
174
36.8
CC00G119400
Cyclotella cryptica
4.1e-16
88.6
200
34.0
CC00G198320
Cyclotella cryptica
1.2e-15
87.0
177
37.3
Ec-16_000550
Ectocarpus siliculosus
1.2e-15
87.0
198
34.8
tho193660
Thalassiosira oceanica
1.2e-15
87.0
177
37.3
sya00G103610
Synedra acus
2.0e-15
86.3
159
38.4
AT3G13180
Arabidopsis thaliana
2.6e-15
85.9
242
32.6
SPBP8B7.20c
Schizosaccharomyces pombe
2.6e-15
85.9
175
32.6
ccr121440
Chondrus crispus
5.9e-15
84.7
175
36.0
fso30050
Fistulifera solaris
5.9e-15
84.7
177
36.7
fso121330
Fistulifera solaris
5.9e-15
84.7
177
36.7
FBgn0037200
Drosophila melanogaster
1.3e-14
83.6
178
37.6
FBgn0031308
Drosophila melanogaster
2.9e-14
82.4
173
32.4
Cre06.g273413
Chlamydomonas reinhardtii
3.8e-14
82.0
189
33.3
ps00G167190
Pseudo-nitzschia multiseries
6.5e-14
81.3
176
35.8
AA0023G00730
Aureococcus anophagefferens
1.1e-13
80.5
166
34.9
Pp3c1_15210
Physcomitrella patens
1.1e-13
80.5
189
32.8
PSNMU-V1.4_AUG-EV-PASAV3_0124080
Pseudo-nitzschia multistriata
1.9e-13
79.7
174
34.5
gene17908
Fragilariopsis cylindrus
2.5e-13
79.3
173
34.7
ptri206730
Phaeodactylum tricornutum
2.5e-13
79.3
164
37.2
WBGene00021476
Caenorhabditis elegans
3.2e-13
79.0
164
33.5
CM20G02150
Cyanidioschyzon merolae
3.2e-13
79.0
202
30.7
emh542740
Emiliania huxleyi
1.6e-12
76.6
183
32.8
sya00G255650
Synedra acus
1.6e-12
76.6
191
32.5
emh35350
Emiliania huxleyi
2.1e-12
76.3
174
33.3
AT5G55920
Arabidopsis thaliana
3.6e-12
75.5
176
31.2
sya00G66250
Synedra acus
4.7e-12
75.1
221
33.5
Pp3c27_2290
Physcomitrella patens
7.9e-12
74.3
174
31.6
sya00G74600
Synedra acus
1.0e-11
73.9
198
29.8
AT4G26600
Arabidopsis thaliana
2.3e-11
72.8
202
30.7
ENSG00000178694
Homo sapiens
2.3e-11
72.8
180
30.6
Sro836_g209070
Seminavis robusta
2.3e-11
72.8
181
32.6
pte312220
Paramecium tetraurelia
3.9e-11
72.0
165
31.5
emh392790
Emiliania huxleyi
5.1e-11
71.6
198
31.3
emh361880
Emiliania huxleyi
5.1e-11
71.6
198
31.3
gsu95910
Galdieria sulphuraria
6.7e-11
71.2
173
30.1
pte682180
Paramecium tetraurelia
1.5e-10
70.1
165
30.9
ENSG00000241058
Homo sapiens
2.6e-10
69.3
179
34.6
tps87090
Thalassiosira pseudonana
4.4e-10
68.6
216
27.8
CC00G21670
Cyclotella cryptica
5.7e-10
68.2
227
28.2
PSNMU-V1.4_AUG-EV-PASAV3_0009290
Pseudo-nitzschia multistriata
5.7e-10
68.2
208
31.2
ps00G22600
Pseudo-nitzschia multiseries
1.3e-09
67.0
231
29.0
ENSG00000130305
Homo sapiens
2.2e-09
66.2
228
28.1
ps00G188550
Pseudo-nitzschia multiseries
2.2e-09
66.2
197
31.5
Naga_100264g3
Nannochloropsis gaditana
2.8e-09
65.9
259
26.6
CC00G149070
Cyclotella cryptica
1.4e-08
63.5
213
26.3
tho205880
Thalassiosira oceanica
1.8e-08
63.2
215
28.4
gsu64840
Galdieria sulphuraria
2.4e-08
62.8
199
29.1
gsu64860
Galdieria sulphuraria
2.4e-08
62.8
199
29.1
Cre13.g606200
Chlamydomonas reinhardtii
3.1e-08
62.4
91
46.2
gene15365
Fragilariopsis cylindrus
4.1e-08
62.0
154
30.5
tps124110
Thalassiosira pseudonana
4.1e-08
62.0
213
27.7
emh624760
Emiliania huxleyi
5.3e-08
61.6
167
28.7
Sro83_g044310
Seminavis robusta
5.3e-08
61.6
164
31.1
PSNMU-V1.4_AUG-EV-PASAV3_0097920
Pseudo-nitzschia multistriata
6.9e-08
61.2
162
28.4
tho19440
Thalassiosira oceanica
6.9e-08
61.2
164
31.1
CC00G63530
Cyclotella cryptica
9.1e-08
60.8
201
27.4
emh263290
Emiliania huxleyi
1.2e-07
60.5
231
26.4
Sro59_g034400
Seminavis robusta
2.6e-07
59.3
212
27.8
AT1G06560
Arabidopsis thaliana
1.3e-06
57.0
81
44.4
tho194420
Thalassiosira oceanica
2.2e-06
56.2
90
38.9
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (7 genes)
Thalassiosira oceanica (8 genes)
Pseudo-nitzschia multiseries (5 genes)
Fistulifera solaris (6 genes)
Fragilariopsis cylindrus (5 genes)
Cyclotella cryptica (9 genes)
Aureococcus anophagefferens (1 genes)
Ectocarpus siliculosus (2 genes)
Nannochloropsis gaditana (3 genes)
Homo sapiens (5 genes)
Drosophila melanogaster (4 genes)
Caenorhabditis elegans (3 genes)
Saccharomyces cerevisiae strain S288C (2 genes)
Schizosaccharomyces pombe (3 genes)
Arabidopsis thaliana (6 genes)
Cyanidioschyzon merolae (2 genes)
Chondrus crispus (1 genes)
Galdieria sulphuraria (5 genes)
Emiliania huxleyi (11 genes)
Paramecium tetraurelia (5 genes)
Seminavis robusta (7 genes)
Synedra acus (6 genes)
Physcomitrella patens (5 genes)
Chlamydomonas reinhardtii (3 genes)
Pseudo-nitzschia multistriata (5 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
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Positions and Genes
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