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Interactive Phylogenetics Module
BLAST
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Gene
GO/InterPro/KEGG description
Binding site description/sequence
Gene family
All species
Phaeodactylum tricornutum
Thalassiosira pseudonana
Thalassiosira oceanica
Pseudo-nitzschia multiseries
Fistulifera solaris
Fragilariopsis cylindrus
Cyclotella cryptica
Aureococcus anophagefferens
Ectocarpus siliculosus
Nannochloropsis gaditana
Homo sapiens
Drosophila melanogaster
Caenorhabditis elegans
Saccharomyces cerevisiae strain S288C
Schizosaccharomyces pombe
Arabidopsis thaliana
Cyanidioschyzon merolae
Chondrus crispus
Galdieria sulphuraria
Emiliania huxleyi
Paramecium tetraurelia
Seminavis robusta
Synedra acus
Physcomitrella patens
Chlamydomonas reinhardtii
Pseudo-nitzschia multistriata
PLAZA diatoms 1.0
Interactive Phylogenetics Module
Gene Id
ptri69840
Data Settings
Gene Selection
Species Selection
Genes
Include
Gene ID
Organism
E-value
Bitscore
Alignment Length
Identity Percentage
ptri69840
Phaeodactylum tricornutum
0.0e+00
1143.6
576
100.0
fso199510
Fistulifera solaris
1.6e-165
584.3
510
59.4
fso73640
Fistulifera solaris
2.9e-162
573.5
514
58.2
CC00G149660
Cyclotella cryptica
4.9e-122
439.9
347
62.0
ptri72160
Phaeodactylum tricornutum
1.9e-118
427.9
317
63.1
Sro695_g188680
Seminavis robusta
1.9e-118
427.9
347
61.7
Sro70_g039030
Seminavis robusta
1.8e-116
421.4
316
61.7
sya00G196410
Synedra acus
2.7e-112
407.5
327
59.3
ps00G65070
Pseudo-nitzschia multiseries
1.0e-111
405.6
318
60.7
gene18213
Fragilariopsis cylindrus
1.8e-111
404.8
310
61.3
fso43770
Fistulifera solaris
1.2e-107
392.1
490
46.3
fso64760
Fistulifera solaris
2.0e-107
391.3
491
46.0
tps142420
Thalassiosira pseudonana
3.8e-106
387.1
285
62.8
tps193950
Thalassiosira pseudonana
4.5e-99
363.6
285
61.4
CC00G122160
Cyclotella cryptica
1.5e-94
348.6
266
64.7
fso77080
Fistulifera solaris
6.1e-80
300.1
337
41.8
ps00G33510
Pseudo-nitzschia multiseries
1.0e-79
299.3
305
42.3
sya00G161050
Synedra acus
3.0e-79
297.7
301
44.2
gene16313
Fragilariopsis cylindrus
1.1e-78
295.8
299
44.1
fso77050
Fistulifera solaris
2.0e-78
295.0
343
44.0
fso191720
Fistulifera solaris
7.4e-78
293.1
324
45.4
Sro99_g050950
Seminavis robusta
4.8e-77
290.4
292
44.2
fso160310
Fistulifera solaris
6.3e-77
290.0
337
40.7
Sro968_g226070
Seminavis robusta
1.8e-76
288.5
291
43.6
ptri130290
Phaeodactylum tricornutum
3.1e-76
287.7
297
43.4
tps130000
Thalassiosira pseudonana
9.4e-73
276.2
292
42.1
sya00G00440
Synedra acus
1.6e-72
275.4
191
64.4
tho217020
Thalassiosira oceanica
1.4e-68
262.3
284
42.3
tho328140
Thalassiosira oceanica
8.0e-48
193.4
494
31.4
Sro9_g007140
Seminavis robusta
2.7e-43
178.3
146
54.1
FBgn0031816
Drosophila melanogaster
7.5e-38
160.2
291
32.0
CC00G69060
Cyclotella cryptica
4.9e-37
157.5
193
36.3
ENSG00000163743
Homo sapiens
1.1e-36
156.4
211
37.0
Cre05.g248550
Chlamydomonas reinhardtii
4.7e-32
141.0
288
33.0
CM13G01410
Cyanidioschyzon merolae
2.3e-31
138.7
290
33.4
Cre17.g718300
Chlamydomonas reinhardtii
2.0e-30
135.6
286
32.5
AT3G62970
Arabidopsis thaliana
5.8e-30
134.0
326
31.3
AT1G74770
Arabidopsis thaliana
2.9e-29
131.7
286
29.0
AT1G18910
Arabidopsis thaliana
6.4e-29
130.6
285
29.8
AT3G18290
Arabidopsis thaliana
9.2e-28
126.7
290
29.3
SPAC2F3.16
Schizosaccharomyces pombe
1.2e-27
126.3
294
31.3
tps146910
Thalassiosira pseudonana
1.6e-27
125.9
231
31.2
Pp3c14_5600
Physcomitrella patens
3.5e-27
124.8
284
31.0
Pp3c6_1960
Physcomitrella patens
7.8e-27
123.6
286
31.5
Naga_100090g9
Nannochloropsis gaditana
1.0e-26
123.2
293
27.6
ccr65580
Chondrus crispus
8.6e-26
120.2
292
28.1
Pp3c25_14501
Physcomitrella patens
2.5e-25
118.6
288
30.9
Pp3c25_14500
Physcomitrella patens
2.5e-25
118.6
288
30.9
ccr161060
Chondrus crispus
3.3e-25
118.2
340
27.9
CC00G86210
Cyclotella cryptica
3.3e-25
118.2
487
25.3
fso155640
Fistulifera solaris
9.5e-25
116.7
480
24.4
Pp3c10_4820
Physcomitrella patens
1.6e-24
115.9
303
28.7
Ec-26_004520
Ectocarpus siliculosus
1.4e-23
112.8
350
28.3
Pp3c11_6970
Physcomitrella patens
4.0e-23
111.3
285
29.8
Pp3c2_31820
Physcomitrella patens
4.0e-23
111.3
285
30.2
Pp3c1_6070
Physcomitrella patens
8.9e-23
110.2
285
29.5
pte243060
Paramecium tetraurelia
6.4e-21
104.0
287
28.2
gsu76240
Galdieria sulphuraria
3.2e-20
101.7
291
28.5
AT5G25560
Arabidopsis thaliana
4.2e-20
101.3
301
29.6
fso150310
Fistulifera solaris
3.9e-18
94.7
230
27.8
pte443830
Paramecium tetraurelia
2.5e-17
92.0
288
28.8
pte760660
Paramecium tetraurelia
9.6e-17
90.1
292
27.4
Sro9_g007130
Seminavis robusta
9.0e-15
83.6
43
72.1
CC00G85450
Cyclotella cryptica
1.7e-10
69.3
47
53.2
PSNMU-V1.4_AUG-EV-PASAV3_0108560
Pseudo-nitzschia multistriata
2.5e-09
65.5
85
38.8
Number of BLAST hits for query gene (per species)
all
20
10
5
1
Organisms
Phaeodactylum tricornutum (3 genes)
Thalassiosira pseudonana (4 genes)
Thalassiosira oceanica (2 genes)
Pseudo-nitzschia multiseries (2 genes)
Fistulifera solaris (10 genes)
Fragilariopsis cylindrus (2 genes)
Cyclotella cryptica (5 genes)
Aureococcus anophagefferens (0 genes)
Ectocarpus siliculosus (1 genes)
Nannochloropsis gaditana (1 genes)
Homo sapiens (1 genes)
Drosophila melanogaster (1 genes)
Caenorhabditis elegans (0 genes)
Saccharomyces cerevisiae strain S288C (0 genes)
Schizosaccharomyces pombe (1 genes)
Arabidopsis thaliana (5 genes)
Cyanidioschyzon merolae (1 genes)
Chondrus crispus (2 genes)
Galdieria sulphuraria (1 genes)
Emiliania huxleyi (0 genes)
Paramecium tetraurelia (3 genes)
Seminavis robusta (6 genes)
Synedra acus (3 genes)
Physcomitrella patens (8 genes)
Chlamydomonas reinhardtii (2 genes)
Pseudo-nitzschia multistriata (1 genes)
External Sequences (optional)
External Sequences Type
Protein
DNA
Program Settings
MSA algorithm
MUSCLE
MAFFT
Tree construction algorithm
FastTree
IQ-TREE (includes model testing)
RAxML
PhyML
Edit MSA alignment
Positions only
Genes only
Positions and Genes
No editing